Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_K22
         (282 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032645-1|AAH32645.1|  445|Homo sapiens chromosome 10 open read...    29   3.6  
AK023552-1|BAB14609.1|  445|Homo sapiens protein ( Homo sapiens ...    29   3.6  

>BC032645-1|AAH32645.1|  445|Homo sapiens chromosome 10 open reading
           frame 88 protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +3

Query: 123 CKITIETFGD*SCI-VESLTPYLRSSVGGSDVSSLAFLGSSVGL 251
           CKI + +FG+  C+ +  +  ++RS    S  SS A LGS + L
Sbjct: 144 CKIKLLSFGERQCVFISKVVVHMRSVFANSSTSSPA-LGSRIDL 186


>AK023552-1|BAB14609.1|  445|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13490 fis, clone PLACE1004118. ).
          Length = 445

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +3

Query: 123 CKITIETFGD*SCI-VESLTPYLRSSVGGSDVSSLAFLGSSVGL 251
           CKI + +FG+  C+ +  +  ++RS    S  SS A LGS + L
Sbjct: 144 CKIKLLSFGERQCVFISKVVVHMRSVFANSSTSSPA-LGSRIDL 186


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,169,413
Number of Sequences: 237096
Number of extensions: 578693
Number of successful extensions: 5039
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5039
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1386033866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)