Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_K19
         (649 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_55238| Best HMM Match : Serpin (HMM E-Value=0)                      46   2e-05
SB_38975| Best HMM Match : Serpin (HMM E-Value=0)                      42   3e-04
SB_55237| Best HMM Match : Serpin (HMM E-Value=0)                      36   0.038
SB_48737| Best HMM Match : WD40 (HMM E-Value=1.5e-36)                  31   0.81 
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)               28   5.7  
SB_51515| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.5  
SB_55288| Best HMM Match : TLD (HMM E-Value=0.00092)                   27   9.9  

>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 345

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
 Frame = +3

Query: 228 GAAEETFDEINTVLRLHPHVCFNRKYFNILKEIG---KNDGGVLEHSGA--MFIDSKINV 392
           GA  ET DE+ T +    H           KE+     N G   E S A  +F+    ++
Sbjct: 5   GARGETADEMATAMHWEGHKPMLPSKHQEHKELSVALNNPGATNEMSIANNLFLQKDFSI 64

Query: 393 YEQFKQDVQNTGVSEVNELPWXXXXXXXXX-INDFVRSATHEAIDEIVTPSELDGVL-LV 566
            ++F    Q    ++++ + +          +N +V   T + I +++ P   + +  L 
Sbjct: 65  LKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKICDLIAPGVFNMLTRLT 124

Query: 567 LIDALYFKGNWRVLFPYENTESSPFTT 647
           L++A+YFKG W   F  E++ SS F T
Sbjct: 125 LVNAIYFKGMWDKPFKKEHSHSSEFRT 151


>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 380

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 4/167 (2%)
 Frame = +3

Query: 159 QETESHFVVSGLSAWAILSTLSFGAAEETFDEINTVLRLHPHVCFNRKYFNILKEIG--K 332
           Q+ +++   S  S    L+    GA   T  ++         V    K+ + L+ +    
Sbjct: 24  QDGQTNLFYSPASIVVALAMTYLGARGNTATQMTKTFHFPTDV--PEKFHDFLQALNASN 81

Query: 333 NDGGVLEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXX-XINDFVRSAT 509
           +DG  +  +  +F      + E+FK+  + +  +E+  + +          +N +V   T
Sbjct: 82  SDGNQILMANRLFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKT 141

Query: 510 HEAIDEIVTPSELD-GVLLVLIDALYFKGNWRVLFPYENTESSPFTT 647
            + I  ++     +   +L L++A+YFKG+W   F    T+S  F T
Sbjct: 142 KDKIKNLIPEGMFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKFKT 188


>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 363

 Score = 35.5 bits (78), Expect = 0.038
 Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +3

Query: 483 INDFVRSATHEAIDEIVTPSELDGVL-LVLIDALYFKGNWRVLFPYENTESSPF 641
           +N +V   T   I E++    ++ +  L++++A+YFKG W+  F  ENT  + F
Sbjct: 101 VNAWVHQQTKGNIKELIPHGVINSLTRLIIVNAVYFKGVWKKEFGEENTFHAAF 154


>SB_48737| Best HMM Match : WD40 (HMM E-Value=1.5e-36)
          Length = 885

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -1

Query: 388 FIFESMNIAPECSKTPPSFLPISFKILKYFLLK---HTCGCS 272
           F  E+   A  C K  P+FL  S+K+L YF  K   + CG S
Sbjct: 652 FANEAEEKAQHCLKAEPAFLEKSWKVLDYFSFKSVRNLCGAS 693


>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
          Length = 511

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 319 FKILKYFLLKHTCGC 275
           +++++YFLL H CGC
Sbjct: 166 WRLMRYFLLTHLCGC 180


>SB_51515| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 128

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 319 FKILKYFLLKHTCGCSLSTVLISSKVSSAA 230
           +++++YFLL H CG S  T    S + S A
Sbjct: 98  WRLMRYFLLTHLCGISHRTWCTLSTICSDA 127


>SB_55288| Best HMM Match : TLD (HMM E-Value=0.00092)
          Length = 349

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1

Query: 319 FKILKYFLLKHTCGCSLSTVL 257
           +++++YFLL H CG   S +L
Sbjct: 62  WRLMRYFLLTHLCGLESSEIL 82


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,391,190
Number of Sequences: 59808
Number of extensions: 339597
Number of successful extensions: 853
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)