Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_K18
(614 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 48 8e-07
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 41 2e-04
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 37 0.003
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi... 31 0.10
SPBC8D2.18c |||adenosylhomocysteinase |Schizosaccharomyces pombe... 30 0.31
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 27 1.6
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 27 2.2
SPBC4F6.09 |str1||siderophore-iron transporter Str1 |Schizosacch... 27 2.2
SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubi... 27 2.8
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 26 3.8
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 5.0
SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase... 25 6.6
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 25 8.7
SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyce... 25 8.7
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 25 8.7
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 48.4 bits (110), Expect = 8e-07
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +3
Query: 393 DSSKEVTDEER----DQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQ 560
+ SKE+ D E D+++E R + F + AIK YTE P F R
Sbjct: 382 EKSKELQDREAYIDPDKAEESRVKGNELFKSGDFANAIKEYTEMTKRAPSDPRGFGNRAA 441
Query: 561 VYLKLNKPNACIKDCTHA 614
YLK+ P CI+DC A
Sbjct: 442 AYLKVMAPAECIRDCNKA 459
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 40.7 bits (91), Expect = 2e-04
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +3
Query: 393 DSSKEVTDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKRGQVYLK 572
DS+ V EE +++ + E A + Y +A+ LYT+AI I+P S ++++ R Y +
Sbjct: 73 DSTAHVNKEE---AEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQ 129
Query: 573 LNKPNACIKD 602
L + ++D
Sbjct: 130 LGQFENAVED 139
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 36.7 bits (81), Expect = 0.003
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +3
Query: 393 DSSKEVTDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSAL--FFAKRGQVY 566
++ E E + ++++++ + E +Y EAIK YTEAI + SAL +++ R Y
Sbjct: 10 NAGTESQQEPAELAEKQKAIGNAFYKEKKYAEAIKAYTEAIDLGSDSALAIYYSNRAATY 69
Query: 567 LKLNK 581
+++ +
Sbjct: 70 MQIGE 74
Score = 32.3 bits (70), Expect = 0.057
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +3
Query: 435 DEKRSEAMRAFSEHQYNEAIKLYTEAILINPQS----ALFFAKRGQVYLKLNKPNACIKD 602
+ +++ F + Y +A + Y+EA+ I+P + A + R V L+L +P + D
Sbjct: 224 ENTKNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRATVLLRLKRPEEALSD 283
Query: 603 CTHA 614
+A
Sbjct: 284 SDNA 287
>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
spliced|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 31.5 bits (68), Expect = 0.10
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 480 YNEAIKLYTEAILINPQSALFFAKRGQVYLKLNKPNACIKDCTHA 614
Y + + T A++INP +RG YL+L P+ +D H+
Sbjct: 57 YTKVVHDCTYALVINPYDKKVIWRRGLAYLRLGHPHLANRDWEHS 101
>SPBC8D2.18c |||adenosylhomocysteinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 29.9 bits (64), Expect = 0.31
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 60 PIFIMSCPFNEEQLTQLKLFVELCKTQPQILHHPKLV---FFKEYLGSLGVTIPTAT 221
P F+MSC F + L Q+ L+ + + PK + + +LG LGV + T T
Sbjct: 355 PSFVMSCSFTNQVLAQIALWTDNTSYPLGVHMLPKKLDEEVARLHLGKLGVKLTTLT 411
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 336 LDMDGVIEADSLDSNQLMGDSSKEVTDEERD 428
++++G+ E +SL+ NQL GD E+ D
Sbjct: 1273 VELNGLFEENSLNFNQLRGDEKTLAISEKND 1303
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 336 LDMDGVIEADSLDSNQLMGDSSKEVTDEERDQSDEKRSEAMRAFSEHQYNEAIK 497
++MD VIE S++L + E++++ D+K ++ R E + E+ K
Sbjct: 445 VEMDIVIEKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPK 498
>SPBC4F6.09 |str1||siderophore-iron transporter Str1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 612
Score = 27.1 bits (57), Expect = 2.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 345 DGVIEADSLDSNQLMGDSSKEVTDEERDQSDEKRSEAMRAFSEHQYN 485
D E D L+ N S KEV+ ++ QSDEK E + F++ ++
Sbjct: 19 DSSSEEDKLEKNIQDETSIKEVSLQDAKQSDEKGVEE-KVFNDESFS 64
>SPAC20G8.04c |||mitochondrial electron transfer
flavoprotein-ubiquinone
oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 14 NFLSFVCVLGLPVLNPYFHNELSFQRRTINAI--KIIRG 124
N+++ V+GL NPY L FQR N K+++G
Sbjct: 335 NYVTVGLVVGLDYPNPYVSPALEFQRMKQNPFFAKVLKG 373
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.2 bits (55), Expect = 3.8
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 145 RFYIIQNWYSSKNILDRLGSQYPLLHLVLKASHLP--ETATLLLTMLRVNHRN 297
R +++W+ S ++ DRL + LLH HLP E +TLL + L + N
Sbjct: 108 RLKTLESWFQSLSLQDRLTTLRTLLH------HLPSQEISTLLSSSLTSSPSN 154
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 25.8 bits (54), Expect = 5.0
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 465 FSEHQYNEAIKLYTEAILINPQ 530
+++ Y A+KLY A++ NPQ
Sbjct: 186 YAKGNYRSALKLYQRALVSNPQ 207
>SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase
Cmk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 25.4 bits (53), Expect = 6.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 104 AIKIIRGIMQNSTSDFTSSKIGILQRISW 190
A KI+ M DF ++I IL+R+S+
Sbjct: 58 AAKIMNKKMMEKKQDFVKNEIAILKRVSY 86
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 25.0 bits (52), Expect = 8.7
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +3
Query: 69 IMSCPFNEEQL----TQLKLFVELCKTQPQILHHPKLVF 173
I+ C NEE + QLKL + LC+ P + + K F
Sbjct: 97 IIKCICNEEHVGIESVQLKLILLLCQNLPNVTTNAKKYF 135
>SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 25.0 bits (52), Expect = 8.7
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +3
Query: 375 SNQLMGDSSKEVTDEERDQSDEKRSEAMRAFSEHQYNEAIKLYTEAILINPQSALFFAKR 554
+ QL+ SS + E D ++++ E + A +NE A ++ QS + A
Sbjct: 24 AKQLIASSSDSEEESELD-TNKQALEHINAQKNITHNEN----KSAEPLSRQSTILDADE 78
Query: 555 GQVYLKLNKPNACIKDCTHA 614
G + PNAC+ + H+
Sbjct: 79 GNQDVSDTTPNACLNEGRHS 98
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/25 (36%), Positives = 20/25 (80%)
Frame = +1
Query: 403 RKLPMRNEISLMRNVQKL*EHSPSI 477
+KLP++ S++R++++L E +PS+
Sbjct: 177 KKLPLKFAYSILRDLKELLEKTPSL 201
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,307,513
Number of Sequences: 5004
Number of extensions: 44736
Number of successful extensions: 181
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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