Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_K17
         (652 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456539-1|CAG30425.1|  583|Homo sapiens PES1 protein.                177   3e-44
U78310-1|AAB61140.1|  588|Homo sapiens pescadillo protein.            174   2e-43
BC032489-1|AAH32489.1|  588|Homo sapiens pescadillo homolog 1, c...   174   2e-43
BC062359-1|AAH62359.1|  374|Homo sapiens chromosome 8 open readi...    30   8.2  
AK096872-1|BAC04880.1|  374|Homo sapiens protein ( Homo sapiens ...    30   8.2  

>CR456539-1|CAG30425.1|  583|Homo sapiens PES1 protein.
          Length = 583

 Score =  177 bits (431), Expect = 3e-44
 Identities = 93/216 (43%), Positives = 130/216 (60%), Gaps = 4/216 (1%)
 Frame = +1

Query: 10  EYGQMRKFLRDYPGINIDHIVKERYPTFVXXXXXXXXXXXXXXXXSTFPSLKKVPRDQSL 189
           E+  + +   + P   +DHI+KERYPTF+                STFP   K       
Sbjct: 100 EWNTVERLKDNKPNYKLDHIIKERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQ 159

Query: 190 LCRRLTVEFMHAVIAAKALRKVFVSVKGFYYQVELEGQTITWIVPHHFSFQPQTKDEVDF 369
           LCRRLTVEFMH +IAA+ALRKVF+S+KG YYQ E+ GQ I WI P+ FS    T  +VD+
Sbjct: 160 LCRRLTVEFMHYIIAARALRKVFLSIKGIYYQAEVLGQPIVWITPYAFSHDHPT--DVDY 217

Query: 370 KIMSTFVEFYTMMLGFVNFKLYHSLNIVYPPKLP----AGFSVDKDKDLIDEHAYVAERI 537
           ++M+TF EFYT +LGFVNF+LY  LN+ YPPKL     A     +    +D  + + E++
Sbjct: 218 RVMATFTEFYTTLLGFVNFRLYQLLNLHYPPKLEGQAQAEAKAGEGTYALDSESCM-EKL 276

Query: 538 AAMNITLAKIDGANAVEEAPEIDVFHTEDEDPQKLE 645
           AA++ +LA++    A EE  E+D F T+ E+ ++ E
Sbjct: 277 AALSASLARV-VVPATEEEAEVDEFPTDGEEDRRKE 311


>U78310-1|AAB61140.1|  588|Homo sapiens pescadillo protein.
          Length = 588

 Score =  174 bits (424), Expect = 2e-43
 Identities = 92/210 (43%), Positives = 126/210 (60%), Gaps = 4/210 (1%)
 Frame = +1

Query: 10  EYGQMRKFLRDYPGINIDHIVKERYPTFVXXXXXXXXXXXXXXXXSTFPSLKKVPRDQSL 189
           E+  + +   + P   +DHI+KERYPTF+                STFP   K       
Sbjct: 100 EWNTVERLKDNKPNYKLDHIIKERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQ 159

Query: 190 LCRRLTVEFMHAVIAAKALRKVFVSVKGFYYQVELEGQTITWIVPHHFSFQPQTKDEVDF 369
           LCRRLTVEFMH +IAA+ALRKVF+S+KG YYQ E+ GQ I WI P+ FS    T  +VD+
Sbjct: 160 LCRRLTVEFMHYIIAARALRKVFLSIKGIYYQAEVLGQPIVWITPYAFSHDHPT--DVDY 217

Query: 370 KIMSTFVEFYTMMLGFVNFKLYHSLNIVYPPKL----PAGFSVDKDKDLIDEHAYVAERI 537
           ++M+TF EFYT +LGFVNF+LY  LN+ YPPKL     A     +    +D  + + E++
Sbjct: 218 RVMATFTEFYTTLLGFVNFRLYQLLNLHYPPKLEGQAQAEAKAGEGTYALDSESCM-EKL 276

Query: 538 AAMNITLAKIDGANAVEEAPEIDVFHTEDE 627
           AA++ +LA++    A EE  E+D F T+ E
Sbjct: 277 AALSASLARV-VVPATEEEAEVDEFPTDGE 305


>BC032489-1|AAH32489.1|  588|Homo sapiens pescadillo homolog 1,
           containing BRCT domain (zebrafish) protein.
          Length = 588

 Score =  174 bits (424), Expect = 2e-43
 Identities = 92/210 (43%), Positives = 126/210 (60%), Gaps = 4/210 (1%)
 Frame = +1

Query: 10  EYGQMRKFLRDYPGINIDHIVKERYPTFVXXXXXXXXXXXXXXXXSTFPSLKKVPRDQSL 189
           E+  + +   + P   +DHI+KERYPTF+                STFP   K       
Sbjct: 100 EWNTVERLKDNKPNYKLDHIIKERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQ 159

Query: 190 LCRRLTVEFMHAVIAAKALRKVFVSVKGFYYQVELEGQTITWIVPHHFSFQPQTKDEVDF 369
           LCRRLTVEFMH +IAA+ALRKVF+S+KG YYQ E+ GQ I WI P+ FS    T  +VD+
Sbjct: 160 LCRRLTVEFMHYIIAARALRKVFLSIKGIYYQAEVLGQPIVWITPYAFSHDHPT--DVDY 217

Query: 370 KIMSTFVEFYTMMLGFVNFKLYHSLNIVYPPKL----PAGFSVDKDKDLIDEHAYVAERI 537
           ++M+TF EFYT +LGFVNF+LY  LN+ YPPKL     A     +    +D  + + E++
Sbjct: 218 RVMATFTEFYTTLLGFVNFRLYQLLNLHYPPKLEGQAQAEAKAGEGTYALDSESCM-EKL 276

Query: 538 AAMNITLAKIDGANAVEEAPEIDVFHTEDE 627
           AA++ +LA++    A EE  E+D F T+ E
Sbjct: 277 AALSASLARV-VVPATEEEAEVDEFPTDGE 305


>BC062359-1|AAH62359.1|  374|Homo sapiens chromosome 8 open reading
           frame 47 protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 508 DEHAYVAERIAAMNITLAKIDGANAVEEAPEIDVFHTEDEDPQKLEE 648
           +E   + ERI   N+T   +D +  VE+    D FH   E P  +E+
Sbjct: 252 EEQPQLLERIPKENVTPEVLDRSQLVEKPVMNDPFHKTPEGPGNMEQ 298


>AK096872-1|BAC04880.1|  374|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39553 fis, clone RECTM2000510. ).
          Length = 374

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 508 DEHAYVAERIAAMNITLAKIDGANAVEEAPEIDVFHTEDEDPQKLEE 648
           +E   + ERI   N+T   +D +  VE+    D FH   E P  +E+
Sbjct: 252 EEQPQLLERIPKENVTPEVLDRSQLVEKPVMNDPFHKTPEGPGNMEQ 298


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,057,664
Number of Sequences: 237096
Number of extensions: 1633416
Number of successful extensions: 3513
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3504
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)