Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_K16
(349 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 43 7e-05
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 41 3e-04
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 41 3e-04
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 36 0.008
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 31 0.23
U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical pr... 30 0.52
U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z82288-1|CAB05322.2| 479|Caenorhabditis elegans Hypothetical pr... 28 1.6
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 28 2.1
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 28 2.1
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical pr... 27 4.9
AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical... 27 4.9
AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical ... 27 4.9
AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical ... 26 8.5
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 42.7 bits (96), Expect = 7e-05
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +2
Query: 161 PPPLCICGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGC 301
PPP C C + PVCG+D TY N C C + +T+ ++ N C
Sbjct: 15 PPPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQ-RTNEDLLFFYNGTC 60
Score = 40.7 bits (91), Expect = 3e-04
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +2
Query: 179 CGKIYSPVCGSDGKTYENPCEF---YCEKDKTHSN-MTIVKNTGCEVGIPC--YCTLEYA 340
C +SPVC S G T++N C F C ++T + +TI K C C C EY+
Sbjct: 818 CPSDFSPVCDSKGSTHQNICHFGVKRCIAERTFGDVLTIDKFEVCNEVKECNNACPKEYS 877
Query: 341 PVC 349
PVC
Sbjct: 878 PVC 880
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 170 LCICGKIYSPVCGSDGKTYENPCEFY---CEKDKTHSNMTIVKNTGCEVGIPCYCTLEYA 340
L C K PVC S G+T+++ C F+ C DK H+ T + P CT E +
Sbjct: 1070 LASCPKTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKCCPAGCTDELS 1129
Query: 341 PVC 349
+C
Sbjct: 1130 VIC 1132
Score = 36.3 bits (80), Expect = 0.006
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 179 CGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTG--CEVGIPCYCTLEYAPVC 349
C Y P+CG++G T+ N C E ++ ++ V TG C+ C +++PVC
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN----CPSDFSPVC 826
Score = 32.3 bits (70), Expect = 0.098
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +2
Query: 179 CGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMT----IVKNTGCEVGIPCYCTLE-YAP 343
C K YSPVC S+G+ N CE + +N+T +VK+ E C + ++P
Sbjct: 872 CPKEYSPVCASNGQNIVNECELDKIRCLVENNVTTGDKLVKDYDGECCRIENCDISVFSP 931
Query: 344 VC 349
VC
Sbjct: 932 VC 933
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 197 PVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGCE-VGIPCYCTLEYAP 343
P+C SD TYEN C+F +K + K E + PC E +P
Sbjct: 596 PICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSECLDSPCALPAENSP 645
Score = 29.9 bits (64), Expect = 0.52
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 179 CGKIYSPVCGSDGKTYENPCE---FYCEKDKTHSNMTIVKNTG 298
C K + PVC + +T++N C+ F C+ +K ++ + ++G
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSG 299
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 179 CGKIYSPVCGSDGKTYENPCEF 244
C K+ +P+C + G+T+ N C F
Sbjct: 66 CEKVGTPICDNFGETHINDCHF 87
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 188 IYSPVCGSDGKTYENPC---EFYCEKDKTHSNMTIVKNTGCEVGIPCYCTLEYAPVC 349
++SPVC ++G T+ N C + C + K + V G P C + PVC
Sbjct: 928 VFSPVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQCCNQP--CDEDKTPVC 982
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 40.7 bits (91), Expect = 3e-04
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 167 PLCICGKI---YSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGCE 304
P C+C + VCGSDGKTY N C N+ + N+ CE
Sbjct: 461 PKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACE 509
Score = 36.3 bits (80), Expect = 0.006
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 200 VCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGC-EVGIPC 319
VCG+DGKTY N C K ++ + K C E G PC
Sbjct: 330 VCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPC 370
Score = 36.3 bits (80), Expect = 0.006
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 179 CGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGCEVGI 313
C + PVC ++G+T++N CE + +T S + + C +G+
Sbjct: 397 CEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGV 441
Score = 29.5 bits (63), Expect = 0.69
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 167 PLCICGKIYSPVCGSDGKTYENPC 238
P C Y P+CGSDG Y N C
Sbjct: 684 PTCNLSSNY-PICGSDGIVYNNQC 706
Score = 29.5 bits (63), Expect = 0.69
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 200 VCGSDGKTYENPCE 241
VCGSDG TY N CE
Sbjct: 880 VCGSDGTTYSNLCE 893
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 194 SPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGCEVGIPCY 322
SPVC S G Y++ C ++ +N+T+ C+ PC+
Sbjct: 258 SPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCD---PCH 297
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 40.7 bits (91), Expect = 3e-04
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 167 PLCICGKI---YSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGCE 304
P C+C + VCGSDGKTY N C N+ + N+ CE
Sbjct: 469 PKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACE 517
Score = 36.3 bits (80), Expect = 0.006
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 200 VCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGC-EVGIPC 319
VCG+DGKTY N C K ++ + K C E G PC
Sbjct: 338 VCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPC 378
Score = 36.3 bits (80), Expect = 0.006
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 179 CGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGCEVGI 313
C + PVC ++G+T++N CE + +T S + + C +G+
Sbjct: 405 CEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGV 449
Score = 29.5 bits (63), Expect = 0.69
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 200 VCGSDGKTYENPCE 241
VCGSDG TY N CE
Sbjct: 819 VCGSDGTTYSNLCE 832
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 194 SPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGCEVGIPCY 322
SPVC S G Y++ C ++ +N+T+ C+ PC+
Sbjct: 266 SPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCD---PCH 305
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 35.9 bits (79), Expect = 0.008
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = +2
Query: 161 PPPLCICGKIYSPVCGSDGK---TYENPCEFYCEKDKTHSNMTIVKNTGCEVGIPCYCTL 331
P C C PVC +G TY N C F C ++ + + + + C YC +
Sbjct: 21 PNSTCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSAR---YCNM 77
Query: 332 EYAPVC 349
PVC
Sbjct: 78 FEQPVC 83
Score = 29.5 bits (63), Expect = 0.69
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 170 LCICGKIYSPVCGSDGKTYENPCEFYCEK 256
+C G+ VC S+G T+ + C FY K
Sbjct: 173 MCSAGQTSLTVCDSEGNTHTDICSFYIAK 201
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 179 CGKIYSPVCGSDGKTYENPCEFYCEK 256
C ++PVC G+T+ N C F K
Sbjct: 125 CPTEWNPVCDKKGQTHANFCTFLNSK 150
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +2
Query: 173 CICGKIYS-PVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGCE 304
C C + PVC +DG Y +PC C + + ++ CE
Sbjct: 528 CSCENAHLYPVCSADGTAYFSPCHAGCREATQFGSDPVIGFASCE 572
>U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical
protein K02G10.5 protein.
Length = 655
Score = 29.9 bits (64), Expect = 0.52
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 173 CICGKIYSPVCGSDGK-TYENPCEFYC 250
C C ++PVC D K T+ +PC C
Sbjct: 449 CHCDSFFNPVCSEDSKLTFLSPCHAGC 475
>U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical
protein F47E1.2 protein.
Length = 744
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +2
Query: 173 CICGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGCE 304
C ++Y PVC G Y +PC C + + + ++ T C+
Sbjct: 538 CENARLY-PVCDQTGFAYFSPCHAGCREAMQYGSDPVLDFTSCQ 580
>Z82288-1|CAB05322.2| 479|Caenorhabditis elegans Hypothetical
protein ZK896.1 protein.
Length = 479
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 345 TGAYSKVQ*QGMPTSHPVFFTIVILLCVLSF 253
TGA+ + Q TS+ + FTIV+ +C+ F
Sbjct: 448 TGAFVSFEFQKSATSNGILFTIVLTICMAIF 478
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = +2
Query: 188 IYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGCEVGIPCYCTLEYA 340
++ P+ S Y++P + S+ + V +G P Y T EY+
Sbjct: 316 VHEPISESSASAYDDPTRNHWNPQSATSDYSTVPTSGTSNVFPSYQTSEYS 366
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = +2
Query: 188 IYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGCEVGIPCYCTLEYA 340
++ P+ S Y++P + S+ + V +G P Y T EY+
Sbjct: 316 VHEPISESSASAYDDPTRNHWNPQSATSDYSTVPTSGTSNVFPSYQTSEYS 366
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = +2
Query: 188 IYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGCEVGIPCYCTLEYA 340
++ P+ S Y++P + S+ + V +G P Y T EY+
Sbjct: 316 VHEPISESSASAYDDPTRNHWNPQSATSDYSTVPTSGTSNVFPSYQTSEYS 366
>Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical
protein B0250.4 protein.
Length = 480
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 338 HIPRYSSRGCPPRIRCFSRLSYCCVSCPFRSKIHTGSRTSYH 213
HI Y C P + SR +Y C CP R T S ++H
Sbjct: 248 HIMMYHLYICHPEQKMESRPTYFCDRCPMR--FGTESALNFH 287
>AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical
protein T21D12.7 protein.
Length = 646
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 284 VKNTGCEVGIPCYCTLEYAPVC 349
+KN GC +G C + YA +C
Sbjct: 306 LKNEGCPMGFECLKSSPYASIC 327
>AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18b protein.
Length = 313
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 347 RRGHIPRYSSRGCPPRIRCFSR-LSYCCVS 261
RR + P + S PP+IRCF + CV+
Sbjct: 276 RRPNFPHFKSFLSPPKIRCFDLFFIFLCVT 305
>AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical
protein Y32F6B.1 protein.
Length = 758
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +2
Query: 173 CICGKI-YSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGCEV 307
C+C + PVC G Y +PC C N +I NT V
Sbjct: 516 CMCEQTPLYPVCDVSGSAYYSPCHAGCAMG--WKNYSIFDNTKATV 559
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,267,787
Number of Sequences: 27780
Number of extensions: 170865
Number of successful extensions: 497
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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