Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_K16
(349 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g17620.1 68415.m02038 cyclin, putative (CYC2a) similar to cyc... 31 0.21
At3g17750.1 68416.m02265 protein kinase family protein contains ... 30 0.49
At1g73460.1 68414.m08504 protein kinase family protein contains ... 29 1.1
At1g73450.1 68414.m08503 protein kinase, putative similar to nuc... 29 1.1
At5g54030.1 68418.m06720 DC1 domain-containing protein contains ... 28 1.5
At1g74580.1 68414.m08639 pentatricopeptide (PPR) repeat-containi... 27 2.6
At5g56050.1 68418.m06993 hypothetical protein 27 4.5
At3g61980.1 68416.m06961 serine protease inhibitor, Kazal-type f... 27 4.5
At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transfera... 26 6.0
At5g48690.1 68418.m06025 hypothetical protein 26 7.9
At4g30790.1 68417.m04362 expressed protein 26 7.9
At4g01575.1 68417.m00205 serine protease inhibitor, Kazal-type f... 26 7.9
At3g24000.1 68416.m03014 pentatricopeptide (PPR) repeat-containi... 26 7.9
>At2g17620.1 68415.m02038 cyclin, putative (CYC2a) similar to cyclin
2b protein [Arabidopsis thaliana] GI:509423; contains
Pfam profiles PF00134: Cyclin, N-terminal domain,
PF02984: Cyclin, C-terminal domain; identical to cDNA
cyc2a mRNA for cyclin 2a protein GI:728518
Length = 429
Score = 31.1 bits (67), Expect = 0.21
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 YSVTALPPPLCICGKIYSPVCGSDG-KTYENPCEFYC 250
Y + PP L +Y+ C DG + + + CEF+C
Sbjct: 336 YEMLRFPPSLLAATSVYTAQCTLDGSRKWNSTCEFHC 372
>At3g17750.1 68416.m02265 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 1138
Score = 29.9 bits (64), Expect = 0.49
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 218 YHLTRRRDYRFFRKYITAVAELLPSIL 138
YHL R DY +FR+++ V ELL + L
Sbjct: 887 YHLLRLYDYFYFREHLLIVCELLKANL 913
>At1g73460.1 68414.m08504 protein kinase family protein contains
protein kinase domain Pfam:PF00069
Length = 1169
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 218 YHLTRRRDYRFFRKYITAVAELLPSIL 138
YHL R DY ++R+++ V ELL + L
Sbjct: 918 YHLLRLYDYFYYREHLLIVCELLKANL 944
>At1g73450.1 68414.m08503 protein kinase, putative similar to
nuclear serine/threonine protein kinase GI:3582644 from
[Rattus norvegicus]
Length = 1152
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 218 YHLTRRRDYRFFRKYITAVAELLPSIL 138
YHL R DY ++R+++ V ELL + L
Sbjct: 901 YHLLRLYDYFYYREHLLIVCELLKANL 927
>At5g54030.1 68418.m06720 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 419
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +2
Query: 185 KIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGCEVGIPCYCTLEYAPV 346
K+Y+ + S G+ YEN C F C+ + + T C + + C P+
Sbjct: 83 KVYTHIFTSSGRIYENTCHF-CQ---SKLEFLFARCTICNLNVDIECLFALPPL 132
>At1g74580.1 68414.m08639 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535 PPR repeat
Length = 763
Score = 27.5 bits (58), Expect = 2.6
Identities = 9/32 (28%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +2
Query: 245 YCEKDKTHSNMTIVKNT---GCEVGIPCYCTL 331
+C+ + H+ + ++ N GCE+ + YCT+
Sbjct: 156 FCKTSRPHAALRLLNNMSSQGCEMNVVAYCTV 187
>At5g56050.1 68418.m06993 hypothetical protein
Length = 283
Score = 26.6 bits (56), Expect = 4.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +3
Query: 288 KTPDARWASPATVPWNMPP 344
+TP ++W SP PW P
Sbjct: 21 ETPSSKWYSPIYTPWRTTP 39
>At3g61980.1 68416.m06961 serine protease inhibitor, Kazal-type
family protein contains Pfam domain PF00050: Kazal-type
serine protease inhibitor domain
Length = 117
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 197 PVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGCEVG 310
PVCG+DG TY C D +VK C+ G
Sbjct: 53 PVCGTDGVTYWCGC-----PDAACHGARVVKKGACDTG 85
>At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transferase
family protein similar to UDP-glucose:salicylic acid
glucosyltransferase [Nicotiana tabacum] GI:7385017;
contains Pfam profiles PF00201: UDP-glucoronosyl and
UDP-glucosyl transferase, PF01535: PPR repeat
Length = 1184
Score = 26.2 bits (55), Expect = 6.0
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Frame = +2
Query: 188 IYSPVC----GSDGKTYENPCEFYCEKDKTHSNMTI---VKNTGCEVGIPCYCTL 331
IY +C G DGKTYEN + +C+ + +K G V + Y L
Sbjct: 1061 IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 1115
>At5g48690.1 68418.m06025 hypothetical protein
Length = 301
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 247 LRKGQDTQQYDNREKHRMRGGHPLL 321
LR+ Q+T++ REK R+R G L+
Sbjct: 75 LREEQETKREREREKERIRAGKELM 99
>At4g30790.1 68417.m04362 expressed protein
Length = 1148
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 224 YENPCEFYCEKDKTHSNMTIVKNTGCE 304
YE ++ K +T N T+VK+ CE
Sbjct: 135 YERQFRYHFHKGRTIYNCTVVKHENCE 161
>At4g01575.1 68417.m00205 serine protease inhibitor, Kazal-type
family protein contains Pfam domain PF00050: Kazal-type
serine protease inhibitor domain
Length = 144
Score = 25.8 bits (54), Expect = 7.9
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 197 PVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTGCEVG 310
PVCG D TY C D + +VK C+VG
Sbjct: 80 PVCGEDSVTYWCGC-----ADALCHGVRVVKQGACDVG 112
>At3g24000.1 68416.m03014 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 633
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 317 RGCPPRIRCFSRLSYCCVSCPFRSKIHTGS 228
RGC C +L CV C F S +H GS
Sbjct: 176 RGC-----CGHQLHGFCVKCGFDSNVHVGS 200
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,656,481
Number of Sequences: 28952
Number of extensions: 152695
Number of successful extensions: 379
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 429398688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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