Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_K15
         (698 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens ...    30   6.9  
AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    30   6.9  

>AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26336 fis, clone HRT02842. ).
          Length = 236

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 171 HLWINIYVCIVRTINNYNHSIVYISASVLFYISLQCNFI 55
           H++I+IY+CI   + +Y H   YI      Y  L  N +
Sbjct: 183 HVYIHIYICIHICVYSYIHMYTYIHTYTYTYTQLFFNHL 221


>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +3

Query: 78  YKIIHLH*YKQLNDYNYLLFELYIHIYLSIDEIVTICLLVVL 203
           Y  I+++ Y  +  Y Y+ F ++ +IYL I   + ICL + L
Sbjct: 20  YIFIYIYIYVYVYIYLYIYFYIFTYIYLYIFIYIYICLYIYL 61


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,656,503
Number of Sequences: 237096
Number of extensions: 1487174
Number of successful extensions: 1570
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1565
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)