Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_K15
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF036702-7|AAB88372.1|  360|Caenorhabditis elegans Hypothetical ...    28   5.6  
AL031627-15|CAA20966.1|  318|Caenorhabditis elegans Hypothetical...    28   7.4  
AF016429-1|AAB65365.2|  518|Caenorhabditis elegans Hypothetical ...    28   7.4  

>AF036702-7|AAB88372.1|  360|Caenorhabditis elegans Hypothetical
           protein F33D4.4 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +3

Query: 261 LMNFKISSLLHYSTFMYTILYL*GFFFIFTVIILGSNNLFYSHFWQSKCYKFK 419
           L+N  I  L  +STF+YT      FFF+F  ++LG      +  + S+ Y FK
Sbjct: 188 LINVAIQLL--FSTFIYTQFGAKSFFFLFGGLVLGMGLHPCAGHFVSEHYVFK 238


>AL031627-15|CAA20966.1|  318|Caenorhabditis elegans Hypothetical
           protein Y102A5C.25 protein.
          Length = 318

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = -3

Query: 165 WINIYVCIVRTINNYNHSIVYISASVLFYISLQCNFIEF*N 43
           WIN+++CI  +IN+    +V+ISA  + YI +  +  +F N
Sbjct: 177 WINLFLCITCSINDV---LVFISA--ILYIPIVISIRKFVN 212


>AF016429-1|AAB65365.2|  518|Caenorhabditis elegans Hypothetical
           protein T21H3.4 protein.
          Length = 518

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -3

Query: 228 VVHKWKNFLTQLTNK*SLFHLWINIYVCIVRTINNYNHSIV 106
           V H+WK       N   +  L   +Y C+V   NN  ++I+
Sbjct: 287 VYHRWKCAAPLYENNRQMPMLIFKVYACVVHDENNRTYAII 327


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,984,529
Number of Sequences: 27780
Number of extensions: 242618
Number of successful extensions: 535
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)