Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_K15
         (698 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g55340.1 68418.m06896 long-chain-alcohol O-fatty-acyltransfer...    30   1.3  
At3g27220.1 68416.m03403 kelch repeat-containing protein contain...    30   1.3  

>At5g55340.1 68418.m06896 long-chain-alcohol O-fatty-acyltransferase
           family protein / wax synthase family protein contains
           similarity to wax synthase similarity to wax synthase
           wax synthase - Simmondsia chinensis, PID:g5020219
           similar to wax synthase [gi:5020219] from Simmondsia
           chinensis
          Length = 333

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 84  IIHLH*YKQLNDYNYLLFELYIHIYLSIDEIVTICLLVV 200
           ++HL+ Y+Q      LL   ++H+YL I+ I+T   +VV
Sbjct: 129 LLHLYSYRQNLSPTILLGLYFVHLYLEIEIILTFVKVVV 167


>At3g27220.1 68416.m03403 kelch repeat-containing protein contains
           Pfam PF01344: Kelch motif (4 repeats); contains Prosite
           PS00334: Myb DNA-binding domain repeat signature 2;
           similar to Male enhanced Antigen-1 (peas) (GI:20513270)
           [Mus musculus]
          Length = 426

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 499 YVFNGFNYRNYIYSYIDHVNFTSQE 573
           YVF+G+   +Y++S++D  NFT  +
Sbjct: 125 YVFSGYGSLDYVHSHVDVFNFTDNK 149


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,495,016
Number of Sequences: 28952
Number of extensions: 194809
Number of successful extensions: 309
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 309
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)