Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_K14
(716 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 79 4e-15
SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 71 1e-12
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 49 4e-06
SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32) 39 0.004
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_20016| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3) 28 6.6
SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 28 8.7
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 79.0 bits (186), Expect = 4e-15
Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Frame = +2
Query: 134 LCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHA 313
+CY+ + + R + LP D++P L CTH++Y A I T K+ + N D
Sbjct: 401 VCYFTNWAQYRPDPVKFLPKDIDPLL--CTHIVYAFAKIDPATNKIGTYEWNDD-----R 453
Query: 314 NYRAITNLKRQFPQLRVFLTVGGDDDTEDP-QKYNPLLESPQARTAFTNSALLLAEQYGF 490
Y+ I +LK + P L+ L VGG + P ++ ++ S RT F +S L L+++Y F
Sbjct: 454 LYKEINDLKLKNPSLKTLLAVGGWNHESGPVSPFSQMVASKSNRTTFISSLLQLSDKYDF 513
Query: 491 DGIDLSWQLP 520
DG DL W+ P
Sbjct: 514 DGFDLDWEYP 523
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 79.0 bits (186), Expect = 4e-15
Identities = 44/142 (30%), Positives = 69/142 (48%)
Frame = +2
Query: 137 CYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHAN 316
CYY + S R P D++P L CTH+L+ A + T+K+ EN H
Sbjct: 25 CYYTNWSQYRPKGGTFWPEDIDPFL--CTHILFSFAKVNQTTHKLDIYEEN-----DHEL 77
Query: 317 YRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNPLLESPQARTAFTNSALLLAEQYGFDG 496
Y+ I LK+ P+L+ + VGG E ++ ++ + + R F SA+ +GFDG
Sbjct: 78 YQRINALKKINPKLKTQIAVGGWTHEEKNSPFSKMVATKEKRAIFIKSAIETLRTHGFDG 137
Query: 497 IDLSWQLPKRKPKKIRSSIGSF 562
+DL W+ P + +S G F
Sbjct: 138 LDLDWEYPGMRGGSPKSDKGRF 159
Score = 72.9 bits (171), Expect = 2e-13
Identities = 42/143 (29%), Positives = 69/143 (48%)
Frame = +2
Query: 134 LCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHA 313
+CYY + S R P D++P L CTH+++ + + T+ M +N D D
Sbjct: 409 VCYYTNWSQYRPKGGTFWPEDIDPHL--CTHVIHSFSKVNLTTHVMEKYEKN-DFDL--- 462
Query: 314 NYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNPLLESPQARTAFTNSALLLAEQYGFD 493
Y+ I LK+ P+L+ + VGG E ++ ++ + + R F SA+ GFD
Sbjct: 463 -YKRINALKKINPKLKTQIAVGGWTHEEKNSPFSKMVATKEKRAIFIKSAIETLRTNGFD 521
Query: 494 GIDLSWQLPKRKPKKIRSSIGSF 562
G+DL W+ P + +S G F
Sbjct: 522 GLDLDWEYPGMRGGSPKSDKGRF 544
>SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 270
Score = 70.5 bits (165), Expect = 1e-12
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Frame = +2
Query: 134 LCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGI-QADTYKMVSLNENLDIDRAH 310
+CY+ + S R+ +A+ P D+ PA CTHL+Y A I Q + M N+ D+ +
Sbjct: 22 VCYHTNWSQYRQGRAKFWPEDI-PA-DLCTHLMYSFAKINQKNELAMYEWND----DKLY 75
Query: 311 ANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNPLLESPQARTAFTNSALLLAEQYGF 490
+ A LK++ P+L+ L VGG + ++ ++++ R F +S + + +GF
Sbjct: 76 PRFNA---LKQKNPELKTLLAVGGWNHENANSPFSRMVKTAATRKVFIDSVIRILRTWGF 132
Query: 491 DGIDLSWQLP 520
DG+DL W+ P
Sbjct: 133 DGLDLDWEYP 142
>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 60.9 bits (141), Expect = 1e-09
Identities = 37/129 (28%), Positives = 64/129 (49%)
Frame = +2
Query: 134 LCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHA 313
+CYY + + R A+ P +++P+L CTH++Y A + AD K+ N A
Sbjct: 25 VCYYTNWAQYR-GLAKYTPDNIDPSL--CTHIVYAFAKMNADNSKLAMFEWN-----DAA 76
Query: 314 NYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNPLLESPQARTAFTNSALLLAEQYGFD 493
Y+ + +LK ++ L VGG + P + ++ + R F + A+L + FD
Sbjct: 77 MYKKVNDLKSS-SNMKTLLAVGGWNMGSGP--FQDMVSTASRRKIFIDDAILFLRNHMFD 133
Query: 494 GIDLSWQLP 520
G+DL W+ P
Sbjct: 134 GLDLDWEYP 142
>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 569
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +2
Query: 317 YRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNPLLESPQARTAFTNSALLLAEQYGFDG 496
Y+ +LK + P L+ L VGG + ++ ++ + +R F +S++ + Q+ FDG
Sbjct: 187 YKEFNDLKLKNPGLKTLLAVGGWNHENYKSPFSRMVRTAASRKVFIDSSIAMLRQWNFDG 246
Query: 497 IDLSWQLP 520
DL W+ P
Sbjct: 247 FDLDWEYP 254
>SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32)
Length = 561
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +2
Query: 317 YRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNPLLESPQARTAFTNSALLLAEQYGFDG 496
Y+ + +LK ++ L VGG + P + ++ + R F + A+L + FDG
Sbjct: 2 YKKVNDLKSS-SNMKTLLAVGGWNMGSGP--FQDMVSTASRRKIFIDDAILFLRNHMFDG 58
Query: 497 IDLSWQLP 520
+DL W+ P
Sbjct: 59 LDLDWEYP 66
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 599 VDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPN 712
+DDK++E +E FT V + + PN ++VI++L N
Sbjct: 703 LDDKKNEPQETFTVTVSSADSNIEISPN-EVVITILDN 739
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 599 VDDKESEHREGFTALVREMKQALNVKP 679
+DDKE E E FT + + +NVKP
Sbjct: 2157 IDDKEIEDLEAFTVTLSSDDKRVNVKP 2183
>SB_20016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 902
Score = 29.5 bits (63), Expect = 2.8
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = -3
Query: 714 TFGKTLITNCILGFTLSACFISRTRAVKPSLCSDSLS---STGVVP-NVFLMLCQKDPIL 547
TFG + +C G+T C I++ + V PSL + + T VP + ++ C K
Sbjct: 292 TFGNETVCDCNPGYTGQRCTINK-QCVVPSLNTGEIGGKYETERVPGSKMVLFCNKG--- 347
Query: 546 ERIFFGFLFGNCQDRSIPSKPYCS 475
I + FG C D S S PY S
Sbjct: 348 --ISLSWRFGVCVDGS--SSPYWS 367
>SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3)
Length = 769
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 60 PSPGYWR*RLRLPTTQHHLVAKAKSSATMTARAISENLKHVCCLRTW 200
P P R R PT H K + T T R ++ +KHV +RT+
Sbjct: 316 PEPTDKRRRDEPPTDIHERRRYRKVTKTKTIRTVTTTVKHVVTVRTY 362
>SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1670
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 60 PSPGYWR*RLRLPTTQHHLVAKAKSSATMTARAISENLKHVCCLRTW 200
P P R R PT H K + T T R ++ +KHV +RT+
Sbjct: 983 PEPTDKRRRDEPPTDIHERRRYRKVTKTKTIRTVTTTVKHVVTVRTY 1029
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 596 PVDDKESEHREGFTALVREM 655
P DDK +E R FT+L++EM
Sbjct: 1066 PEDDKPAEQRMSFTSLLKEM 1085
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,622,985
Number of Sequences: 59808
Number of extensions: 414387
Number of successful extensions: 1319
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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