Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_K12
(632 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 131 3e-31
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 131 3e-31
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 46 2e-05
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 45 5e-05
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 45 5e-05
Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical p... 29 3.7
AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical ... 29 3.7
AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical ... 29 3.7
AF098996-6|AAC68709.1| 481|Caenorhabditis elegans Hypothetical ... 29 3.7
Z50016-14|CAI06050.2| 177|Caenorhabditis elegans Hypothetical p... 28 4.8
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 28 6.4
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 27 8.4
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 131 bits (317), Expect = 3e-31
Identities = 59/72 (81%), Positives = 64/72 (88%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCG 180
SDYNIQKESTLHLVLRLRGG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCG
Sbjct: 57 SDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCG 116
Query: 181 HTNNLRPKKKIK 216
H++ LR KKK+K
Sbjct: 117 HSSELRIKKKLK 128
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 131 bits (317), Expect = 3e-31
Identities = 59/72 (81%), Positives = 64/72 (88%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCG 180
SDYNIQKESTLHLVLRLRGG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCG
Sbjct: 57 SDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCG 116
Query: 181 HTNNLRPKKKIK 216
H++ LR KKK+K
Sbjct: 117 HSSELRIKKKLK 128
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGGTI 66
SDYNIQKESTLHLVLRLRGG I
Sbjct: 817 SDYNIQKESTLHLVLRLRGGDI 838
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 57 SDYNIQKESTLHLVLRLRGG 76
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 133 SDYNIQKESTLHLVLRLRGG 152
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 209 SDYNIQKESTLHLVLRLRGG 228
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 285 SDYNIQKESTLHLVLRLRGG 304
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 361 SDYNIQKESTLHLVLRLRGG 380
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 437 SDYNIQKESTLHLVLRLRGG 456
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 513 SDYNIQKESTLHLVLRLRGG 532
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 589 SDYNIQKESTLHLVLRLRGG 608
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 665 SDYNIQKESTLHLVLRLRGG 684
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 741 SDYNIQKESTLHLVLRLRGG 760
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 57 SDYNIQKESTLHLVLRLRGG 76
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 133 SDYNIQKESTLHLVLRLRGG 152
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 209 SDYNIQKESTLHLVLRLRGG 228
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 285 SDYNIQKESTLHLVLRLRGG 304
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 361 SDYNIQKESTLHLVLRLRGG 380
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 437 SDYNIQKESTLHLVLRLRGG 456
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 57 SDYNIQKESTLHLVLRLRGG 76
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 133 SDYNIQKESTLHLVLRLRGG 152
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 209 SDYNIQKESTLHLVLRLRGG 228
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 285 SDYNIQKESTLHLVLRLRGG 304
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 361 SDYNIQKESTLHLVLRLRGG 380
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 437 SDYNIQKESTLHLVLRLRGG 456
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 513 SDYNIQKESTLHLVLRLRGG 532
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 589 SDYNIQKESTLHLVLRLRGG 608
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 665 SDYNIQKESTLHLVLRLRGG 684
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
SDYNIQKESTLHLVLRLRGG
Sbjct: 741 SDYNIQKESTLHLVLRLRGG 760
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGGTI 66
SDYNIQK+STLHLVLRLRGG I
Sbjct: 817 SDYNIQKQSTLHLVLRLRGGDI 838
>Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical
protein R13H4.2a protein.
Length = 225
Score = 31.1 bits (67), Expect = 0.69
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 418 LTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEXYYNFYQQLTTRY 564
L +D ++ YYY+ + ++ S RY + Y+N Y TRY
Sbjct: 71 LYDDYWYDKYYYFSPLYRSTYYPSRRYSYSDYLPNPYYWNNYGSYWTRY 119
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 118 CRKCYARLHPRATNCRKTKCGHT 186
CR CY H + R +CGHT
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHT 85
>Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 126 VLCSSPSSCNQLQEDQVWTHKQPPPQEE 209
++ S+P++ +D+VWT +PPP E
Sbjct: 188 LVTSTPTTVFDHSDDEVWTPYRPPPNRE 215
>Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 126 VLCSSPSSCNQLQEDQVWTHKQPPPQEE 209
++ S+P++ +D+VWT +PPP E
Sbjct: 188 LVTSTPTTVFDHSDDEVWTPYRPPPNRE 215
>AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 126 VLCSSPSSCNQLQEDQVWTHKQPPPQEE 209
++ S+P++ +D+VWT +PPP E
Sbjct: 188 LVTSTPTTVFDHSDDEVWTPYRPPPNRE 215
>AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 126 VLCSSPSSCNQLQEDQVWTHKQPPPQEE 209
++ S+P++ +D+VWT +PPP E
Sbjct: 188 LVTSTPTTVFDHSDDEVWTPYRPPPNRE 215
>AF098996-6|AAC68709.1| 481|Caenorhabditis elegans Hypothetical
protein T11F1.2 protein.
Length = 481
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 374 EQYVYYANYSRVFFFFFYHWKLLILVAKLTFSCYM 270
+Q V AN+S VF FF + + +L+ L SC M
Sbjct: 16 KQLVVSANFSHVFSFFNQNCSIKMLLITLFLSCVM 50
>Z50016-14|CAI06050.2| 177|Caenorhabditis elegans Hypothetical
protein T21C12.8 protein.
Length = 177
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -1
Query: 374 EQYVYYANYSRVFFFFFYHWKLLILVAKLT 285
++YVY+ + + FF F+ + + +L A LT
Sbjct: 136 KRYVYFYSVGKTFFITFFVFSMFLLFASLT 165
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 1 SDYNIQKESTLHLVLRLRGG 60
+DY + S LHLVL LRGG
Sbjct: 57 ADYKVLGGSVLHLVLALRGG 76
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 190 CLCVHTWSSCNWLHEDGDEHSTCDKSFSHS 101
CL H++ +C + E D+ +CD+S SHS
Sbjct: 486 CLGKHSFQTCRRV-ESHDQSRSCDRSPSHS 514
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,289,718
Number of Sequences: 27780
Number of extensions: 293218
Number of successful extensions: 747
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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