Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_K11
(181 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 0.33
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 25 1.0
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 25 1.0
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 25 1.8
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 25 1.8
SPAC19B12.10 |sst2||human AMSH protein homolog|Schizosaccharomyc... 25 1.8
SPCC1672.02c |sap1||switch-activating protein Sap1|Schizosacchar... 24 2.3
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 24 2.3
SPAC9E9.04 |||bcap family homolog|Schizosaccharomyces pombe|chr ... 24 2.3
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 24 2.3
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 24 2.3
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 24 2.3
SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subuni... 24 3.1
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 23 4.0
SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 23 4.0
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 23 4.0
SPBC16D10.09 |pcn1|pcn|PCNA |Schizosaccharomyces pombe|chr 2|||M... 23 5.3
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 23 5.3
SPBC409.08 |||spermine family transporter |Schizosaccharomyces p... 23 7.1
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 23 7.1
SPAC139.06 |hat1|SPAC23C4.01|histone acetyltransferase Hat1|Schi... 23 7.1
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 23 7.1
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 23 7.1
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 23 7.1
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 22 9.3
SPAC8C9.15c |tif225||translation initiation factor eIF2B epsilon... 22 9.3
SPCC16A11.11 |mrpl31||mitochondrial ribosomal protein subunit L3... 22 9.3
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 22 9.3
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 27.1 bits (57), Expect = 0.33
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 47 LKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEEQRR 181
+ + Y E+REEI+ L E+ Q K L+ +++++E+ R
Sbjct: 361 VSKSYEESREEIEALHETFTEEVTSFQS--TKRLKEEKIIQEKSR 403
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 25.4 bits (53), Expect = 1.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 65 EAREEIDELRTLMKEQNDQLQDYRVKYLQAQQLV 166
+A +DEL+ M + L+D RVK ++A ++V
Sbjct: 250 QAGSIVDELKKTMALKASVLRDGRVKEIEASEIV 283
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 8 KEQAFEQEVNTRALKQCYREAREEIDELRTLMKEQNDQLQDYRV 139
+EQ E + + ++ + EE+ ELR L++EQ Q R+
Sbjct: 494 QEQNNEFDRQLKEQEEDLQNKEEELTELRKLLREQTQDSQKLRL 537
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 24.6 bits (51), Expect = 1.8
Identities = 10/52 (19%), Positives = 25/52 (48%)
Frame = +2
Query: 23 EQEVNTRALKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEEQR 178
E + R + + IDEL ++ ++ Q+ + + ++ + ++EQR
Sbjct: 1006 EHKSRLREFENALWDINSSIDELVKFIEFESKQMNSVKAERIELENQIQEQR 1057
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 24.6 bits (51), Expect = 1.8
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +2
Query: 47 LKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEEQ 175
LK C +++EE+ +L +++ N + + L+ + VEE+
Sbjct: 476 LKLCLSDSQEELLQLNAKLEKANIVIDELNSAKLKLSKQVEEE 518
>SPAC19B12.10 |sst2||human AMSH protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 24.6 bits (51), Expect = 1.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 53 QCYREAREEIDELRTLMKEQNDQLQ 127
Q R A EEI+ ++ ++KEQ +Q Q
Sbjct: 89 QGVRNALEEIELIKPIVKEQYEQYQ 113
>SPCC1672.02c |sap1||switch-activating protein
Sap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 254
Score = 24.2 bits (50), Expect = 2.3
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 14 QAFEQEVNTRALKQCYREAREEIDELRTLMKEQNDQLQDYRVKYL 148
+ +EQ + R +E+D+L K + +LQ YR K+L
Sbjct: 90 RVYEQRLAHRQPGMKTTPEEDELDQLCDEWKARLSELQQYREKFL 134
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 24.2 bits (50), Expect = 2.3
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 79 FFSCLPVTLLQGSRVYF 29
FFS LP T++ G+R ++
Sbjct: 270 FFSLLPSTIIAGARAFY 286
>SPAC9E9.04 |||bcap family homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 188
Score = 24.2 bits (50), Expect = 2.3
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = +2
Query: 65 EAREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEEQR 178
+A EE++ LRT ++ ++ + + KY + VE+++
Sbjct: 149 KAVEELETLRTKLETRDKEYETLAEKYAAVTKTVEKKK 186
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 24.2 bits (50), Expect = 2.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 129 TTELSTFKHNS*WKSN 176
TT S F+H + WKSN
Sbjct: 192 TTPFSLFEHEAVWKSN 207
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 24.2 bits (50), Expect = 2.3
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +2
Query: 14 QAFEQEVNTRALKQCYREAREEIDELRTLMKEQNDQLQD 130
Q E++ + ++ ++ RE++D+L+ ++E +LQD
Sbjct: 513 QDIEEDYENKLMRM-EQQWREDVDQLQEYVEEITQELQD 550
Score = 22.6 bits (46), Expect = 7.1
Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 14 QAFEQEV--NTRALKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEEQRR 181
+ FE+ + N ++ E + DE+ L + ND+ ++ + Q L EE +
Sbjct: 581 EKFEKTIRENEESISLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENNK 638
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 24.2 bits (50), Expect = 2.3
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 65 EAREEIDELRTLMKEQNDQLQDYRVKYLQ-AQQLVEEQRR 181
+A E ID+L +++E +DQL+ Y +K + LV+E +
Sbjct: 604 KANETIDQLTKMLEEVSDQLR-YSLKERDFFRSLVQENEK 642
>SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subunit
8|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 23.8 bits (49), Expect = 3.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 2 GSKEQAFEQEVNTRALKQCYREAREEIDELR 94
GSKE +++ RA + YREA + ++L+
Sbjct: 129 GSKEAMQQKKKEKRAALKHYREASDNEEDLK 159
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 23.4 bits (48), Expect = 4.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 32 VNTRALKQCYREAREEIDELRTLMKEQNDQLQD 130
+NT+ ++ E+ DE +KE+N+ LQD
Sbjct: 119 LNTKQEHLDIKKRLEKSDETVCKLKEENENLQD 151
>SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 350
Score = 23.4 bits (48), Expect = 4.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 31 SKHESPEAMLQGGTRRNR*TENLDERT 111
S + P A + GTR+ ENLD+R+
Sbjct: 89 STTDLPSAAMARGTRQLSYNENLDQRS 115
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 23.4 bits (48), Expect = 4.0
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +2
Query: 5 SKEQAFEQEVNTRALKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQ 157
+K++ + E + R + Y E+ EE ++ +KE + V+ LQ Q
Sbjct: 160 AKKEESKLEEDLRNARAKYEESLEEFEDRMVQLKELEPDRVENVVRLLQMQ 210
>SPBC16D10.09 |pcn1|pcn|PCNA |Schizosaccharomyces pombe|chr
2|||Manual
Length = 260
Score = 23.0 bits (47), Expect = 5.3
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +2
Query: 74 EEIDELRTLM--KEQNDQLQDYRVKYLQAQQ 160
E+ E+ L+ E+ND++ DY VK + Q
Sbjct: 93 EDTPEVLNLVFESEKNDRISDYDVKLMDIDQ 123
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 23.0 bits (47), Expect = 5.3
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +2
Query: 5 SKEQAFEQEVNTRALKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEEQRR 181
++E+ Q+ R ++ R+ RE+ +LR K ++++ + +L E+QRR
Sbjct: 85 AQEERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKERIRLQEQQRR 143
>SPBC409.08 |||spermine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 539
Score = 22.6 bits (46), Expect = 7.1
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -3
Query: 65 PCNIASGLSCLLLVQ 21
PC +A ++CLL+V+
Sbjct: 183 PCALAPNIACLLIVR 197
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 22.6 bits (46), Expect = 7.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 25 TRSKHESPEAMLQGGTRRNR*TENLDERT 111
T S+H+ PE Q G EN++E++
Sbjct: 123 TSSQHQKPETSSQIGKDNAAPVENVNEKS 151
>SPAC139.06 |hat1|SPAC23C4.01|histone acetyltransferase
Hat1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 22.6 bits (46), Expect = 7.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 127 LQLIILFFHQGSQFID 80
LQ+ LFF +G FID
Sbjct: 140 LQIFSLFFIEGGSFID 155
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 22.6 bits (46), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 14 QAFEQEVNTRALKQCYREAREEIDELRTLMKE 109
Q ++ + T LKQ RE +E+D L+ E
Sbjct: 444 QRHKEYLLTEQLKQIKRELGQELDSKEALVTE 475
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 22.6 bits (46), Expect = 7.1
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 23 EQEVNTRALKQCYREAREEI---DELRTLMKEQNDQLQDYRVKYL 148
E++ NT++ K A I D L +K ND D+R YL
Sbjct: 3 ERDFNTQSPKFKDENANSVISQSDFLGKSLKNNNDDYSDFRGSYL 47
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 22.6 bits (46), Expect = 7.1
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2
Query: 140 KYLQAQQLVEEQR 178
+YLQA QLVE++R
Sbjct: 546 QYLQALQLVEDER 558
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 22.2 bits (45), Expect = 9.3
Identities = 9/49 (18%), Positives = 26/49 (53%)
Frame = +2
Query: 26 QEVNTRALKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEE 172
++ N L++ + ++RE+++ + QLQ+ V Q ++ +++
Sbjct: 177 KDTNLTNLEKLFADSREQLETKCKELAAAEQQLQELSVHNQQLEESIKQ 225
>SPAC8C9.15c |tif225||translation initiation factor eIF2B epsilon
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 678
Score = 22.2 bits (45), Expect = 9.3
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = -3
Query: 119 DHSVLSSRFSVHRFLLVPPCNIASGLSCLLLVQTLV 12
D ++L+ FS R + ++ SC++ +TL+
Sbjct: 298 DSNLLNQTFSYQRHQIYKEEDVVLARSCIIKARTLI 333
>SPCC16A11.11 |mrpl31||mitochondrial ribosomal protein subunit
L31|Schizosaccharomyces pombe|chr 3|||Manual
Length = 115
Score = 22.2 bits (45), Expect = 9.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 50 KQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEEQ 175
+Q R E +D LRT ++E+N + R++ A E Q
Sbjct: 32 RQRLRAVDEVVDVLRTALQEKNQSCK--RIESFVANHQPESQ 71
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 22.2 bits (45), Expect = 9.3
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 50 KQCYREARE-EIDELRTLMKEQNDQLQDYRVKYLQAQQLVEEQR 178
K+ Y E E+D++ T ++ +QL+ + + + +EE R
Sbjct: 365 KEAYSTNNEGELDDILTTLESDREQLRRHEEHSQKLLKFIEEIR 408
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,250
Number of Sequences: 5004
Number of extensions: 8271
Number of successful extensions: 57
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 2,362,478
effective HSP length: 40
effective length of database: 2,162,318
effective search space used: 41084042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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