Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_K11
(181 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic int... 31 0.14
U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate fi... 31 0.14
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 28 0.76
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 27 1.3
U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonin... 27 1.3
U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase ... 27 1.3
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 27 1.3
AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical ... 27 1.3
Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical pr... 27 1.8
AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical ... 27 1.8
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 27 2.3
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 27 2.3
Z81536-9|CAB04362.1| 733|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z71267-2|CAA95849.1| 311|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 26 3.1
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical pr... 26 3.1
X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic int... 26 3.1
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 26 3.1
U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical p... 26 3.1
Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical p... 26 4.1
Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical pr... 26 4.1
U41558-1|AAK39248.1| 333|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z82284-5|CAB05291.1| 418|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 25 5.4
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 25 5.4
U50311-5|AAX22295.1| 299|Caenorhabditis elegans Serpentine rece... 25 5.4
U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine rece... 25 5.4
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 25 5.4
U28971-2|AAA68377.1| 180|Caenorhabditis elegans Hypothetical pr... 25 5.4
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 25 5.4
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 25 7.1
AL032631-1|CAB63336.1| 453|Caenorhabditis elegans Hypothetical ... 25 7.1
AF043702-6|AAK21497.2| 306|Caenorhabditis elegans Hypothetical ... 25 7.1
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 25 7.1
Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical p... 25 9.4
Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical p... 25 9.4
Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical pr... 25 9.4
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 25 9.4
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 25 9.4
AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical ... 25 9.4
AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical ... 25 9.4
>X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 575
Score = 30.7 bits (66), Expect = 0.14
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 26 QEVNTRALKQCYRE--AREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEE 172
QE++T+ + C + AREE+ LRT + + ++ D + L ++ +E+
Sbjct: 308 QEIHTQNSRNCLEQNYAREEVKRLRTTLGDMRGKMADLEGRNLLLEKQIED 358
>U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate
filament, a protein 4 protein.
Length = 558
Score = 30.7 bits (66), Expect = 0.14
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 26 QEVNTRALKQCYRE--AREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEE 172
QE++T+ + C + AREE+ LRT + + ++ D + L ++ +E+
Sbjct: 291 QEIHTQNSRNCLEQNYAREEVKRLRTTLGDMRGKMADLEGRNLLLEKQIED 341
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 28.3 bits (60), Expect = 0.76
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 17 AFEQEVN-TRALKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQQ 160
A E +V +L + +E EE++ LR +K+ ND++ D + + AQQ
Sbjct: 743 ASEDKVKQVESLLENLKEPLEELNNLRANLKDSNDKILDLQSQLELAQQ 791
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/59 (22%), Positives = 28/59 (47%)
Frame = +2
Query: 5 SKEQAFEQEVNTRALKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEEQRR 181
S Q+ +NT A + R+EI++L+ + Q ++L ++++ E+ R
Sbjct: 150 SNYQSTSSVINTNATANLENDQRDEIEKLKAEIARQTEKLMTAEQALKESEKAAAEKER 208
>U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonine
kinase protein.
Length = 982
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 17 AFEQEVNTRA--LKQCYREAREEIDELRTLMKEQ 112
A E+ + TR L+Q E RE++ E+R L KEQ
Sbjct: 906 ALEERIGTRRAMLEQKIIEEREQMGEMRRLKKEQ 939
>U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase
protein 18, isoforma protein.
Length = 982
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 17 AFEQEVNTRA--LKQCYREAREEIDELRTLMKEQ 112
A E+ + TR L+Q E RE++ E+R L KEQ
Sbjct: 906 ALEERIGTRRAMLEQKIIEEREQMGEMRRLKKEQ 939
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/59 (22%), Positives = 28/59 (47%)
Frame = +2
Query: 5 SKEQAFEQEVNTRALKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEEQRR 181
S Q+ +NT A + R+EI++L+ + Q ++L ++++ E+ R
Sbjct: 150 SNYQSTSSVINTNATANLENDQRDEIEKLKAEIARQTEKLMTAEQALKESEKAAAEKER 208
>AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical
protein Y45F10D.9 protein.
Length = 492
Score = 27.5 bits (58), Expect = 1.3
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +2
Query: 2 GSKEQAFEQEVNTRALKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEEQR 178
G KE+ E + L+ +EE + +R L++++ D++ D + Q+ +EE +
Sbjct: 216 GVKEEFEEMSEKFKELEDEVELVKEERENIRLLVEDKEDEVADLKQDTESLQKQLEENQ 274
>Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 35 NTRALKQCYREAREEIDELR---TLMKEQNDQLQDYRVKYLQAQQLVEEQRR 181
NT A ++C + + + D+L T + +N+ + +R++ L VEEQ R
Sbjct: 118 NTEAARRCREKIKRKTDDLETELTRLTARNEVMNQHRIRLLSQ---VEEQMR 166
>AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 35 NTRALKQCYREAREEIDELR---TLMKEQNDQLQDYRVKYLQAQQLVEEQRR 181
NT A ++C + + + D+L T + +N+ + +R++ L VEEQ R
Sbjct: 118 NTEAARRCREKIKRKTDDLETELTRLTARNEVMNQHRIRLLSQ---VEEQMR 166
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 26.6 bits (56), Expect = 2.3
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 5 SKEQAFEQEVNTRALKQCYREAREEIDELRTL--MKEQNDQLQDYRVKYLQAQQLVEEQR 178
+K + + VN A +Q R E D L+ + K Q D LQ VKY AQQL E +R
Sbjct: 188 NKVEDLNKHVNDLA-QQRQRLQAENNDLLKEVHDQKVQLDNLQ--HVKYTLAQQLEEARR 244
Query: 179 R 181
R
Sbjct: 245 R 245
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 26.6 bits (56), Expect = 2.3
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 5 SKEQAFEQEVNTRALKQCYREAREEIDELRTL--MKEQNDQLQDYRVKYLQAQQLVEEQR 178
+K + + VN A +Q R E D L+ + K Q D LQ VKY AQQL E +R
Sbjct: 188 NKVEDLNKHVNDLA-QQRQRLQAENNDLLKEVHDQKVQLDNLQ--HVKYTLAQQLEEARR 244
Query: 179 R 181
R
Sbjct: 245 R 245
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 26.6 bits (56), Expect = 2.3
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 5 SKEQAFEQEVNTRALKQCYREAREEIDELRTL--MKEQNDQLQDYRVKYLQAQQLVEEQR 178
+K + + VN A +Q R E D L+ + K Q D LQ VKY AQQL E +R
Sbjct: 204 NKVEDLNKHVNDLA-QQRQRLQAENNDLLKEVHDQKVQLDNLQ--HVKYTLAQQLEEARR 260
Query: 179 R 181
R
Sbjct: 261 R 261
>Z81536-9|CAB04362.1| 733|Caenorhabditis elegans Hypothetical
protein F40D4.12 protein.
Length = 733
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 83 DELRTLMKEQNDQLQDYRVKYLQAQQLVEEQ 175
D+L TL+ +++QL + VK+ + EE+
Sbjct: 78 DDLETLLNSESEQLDKFSVKFCICEDEEEEE 108
>Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 26 QEVNTRALKQCYRE--AREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEE 172
QE+ T++ +Q + A+EE+ LRT + + +L D + ++ ++E
Sbjct: 299 QEIQTQSARQNMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQE 349
>Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 26 QEVNTRALKQCYRE--AREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEE 172
QE+ T++ +Q + A+EE+ LRT + + +L D + ++ ++E
Sbjct: 307 QEIQTQSARQNMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQE 357
>Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 26 QEVNTRALKQCYRE--AREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEE 172
QE+ T++ +Q + A+EE+ LRT + + +L D + ++ ++E
Sbjct: 307 QEIQTQSARQNMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQE 357
>Z71267-2|CAA95849.1| 311|Caenorhabditis elegans Hypothetical
protein W01A8.5 protein.
Length = 311
Score = 26.2 bits (55), Expect = 3.1
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 2 GSKEQAFEQEVNTRALKQCYREAREEIDELRTLMKEQNDQL--QDYRVKYLQA 154
G+K +A K+ E + +IDE+R ++KE + + + Y+ K+++A
Sbjct: 63 GTKIEAINYIHRNIVKKRSIEEIKAKIDEIREIIKEHKEIILPECYKNKWIEA 115
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 EQAFEQEVNTRALKQCYR-EAREEIDELRTLMKEQNDQLQ 127
E E E +R+ R E + E+DEL + EQN QL+
Sbjct: 1126 EDELEHERQSRSKADRARAELQRELDELNERLDEQNKQLE 1165
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 EQAFEQEVNTRALKQCYR-EAREEIDELRTLMKEQNDQLQ 127
E E E +R+ R E + E+DEL + EQN QL+
Sbjct: 1126 EDELEHERQSRSKADRARAELQRELDELNERLDEQNKQLE 1165
>Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 26 QEVNTRALKQCYRE--AREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEE 172
QE+ T++ +Q + A+EE+ LRT + + +L D + ++ ++E
Sbjct: 299 QEIQTQSARQNMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQE 349
>Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 26 QEVNTRALKQCYRE--AREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEE 172
QE+ T++ +Q + A+EE+ LRT + + +L D + ++ ++E
Sbjct: 307 QEIQTQSARQNMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQE 357
>Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 26 QEVNTRALKQCYRE--AREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEE 172
QE+ T++ +Q + A+EE+ LRT + + +L D + ++ ++E
Sbjct: 307 QEIQTQSARQNMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQE 357
>X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 592
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 26 QEVNTRALKQCYRE--AREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEE 172
QE+ T++ +Q + A+EE+ LRT + + +L D + ++ ++E
Sbjct: 326 QEIQTQSARQNMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQE 376
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 EQAFEQEVNTRALKQCYR-EAREEIDELRTLMKEQNDQLQ 127
E E E +R+ R E + E+DEL + EQN QL+
Sbjct: 1126 EDELEHERQSRSKADRARAELQRELDELNERLDEQNKQLE 1165
>U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical
protein C05D11.13 protein.
Length = 270
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +2
Query: 23 EQEVNTRALKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEEQRR 181
E+E R +Q R+ E + E + + ++R +YLQ + + Q R
Sbjct: 110 EEEYRERLKRQAERKKMERMQESEDQANNRRIKAAEHRRQYLQRESFEKAQER 162
>Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical
protein R107.4d protein.
Length = 817
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 47 LKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQ 157
L+ YR+ ++ I E L+++ +++D +YLQAQ
Sbjct: 637 LRSNYRKLQDMISECVDLLEKPFQEMKDTVNRYLQAQ 673
>Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical
protein R107.4c protein.
Length = 816
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 47 LKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQ 157
L+ YR+ ++ I E L+++ +++D +YLQAQ
Sbjct: 637 LRSNYRKLQDMISECVDLLEKPFQEMKDTVNRYLQAQ 673
>Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical
protein R107.4b protein.
Length = 820
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 47 LKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQ 157
L+ YR+ ++ I E L+++ +++D +YLQAQ
Sbjct: 637 LRSNYRKLQDMISECVDLLEKPFQEMKDTVNRYLQAQ 673
>Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical
protein R107.4a protein.
Length = 754
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 47 LKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQ 157
L+ YR+ ++ I E L+++ +++D +YLQAQ
Sbjct: 637 LRSNYRKLQDMISECVDLLEKPFQEMKDTVNRYLQAQ 673
>U41558-1|AAK39248.1| 333|Caenorhabditis elegans Hypothetical
protein K02B2.3 protein.
Length = 333
Score = 25.8 bits (54), Expect = 4.1
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Frame = +2
Query: 5 SKEQAFEQEVNTRALKQC-----YREAREEIDELRTLMKEQNDQL-QDYRVKYL 148
++E+ + ++ RA KQ Y E+DELR +K D L Q V YL
Sbjct: 273 ARERVYTKQFYRRAQKQNFDIEKYNRLVTEVDELRNQLKRMRDPLFQHLPVSYL 326
>Z82284-5|CAB05291.1| 418|Caenorhabditis elegans Hypothetical
protein T27E7.6 protein.
Length = 418
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +2
Query: 8 KEQAFEQEVNTRALKQCYREAREEI----DELRTLMKEQNDQLQDYRVKYLQAQQLVEEQ 175
+E E+E+ + RE +I +E + +MKE++D+L+ Y + + + +E+
Sbjct: 149 EEHRKEKEIAQEKMDAAKREGSMKIALVEEEKQKIMKERSDELEKYTREMNEMAKNHQEE 208
Query: 176 RR 181
R+
Sbjct: 209 RK 210
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 8 KEQAFEQEVNTRALKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEEQR 178
K+Q + N + ++ E++ K +ND LQ R + L+A Q ++E+R
Sbjct: 992 KDQVEVLKSNVETSVKGMKDEAEKLKARWEQFKPRNDALQGDREEMLKAIQFIKEKR 1048
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
protein T28C6.9 protein.
Length = 1861
Score = 25.4 bits (53), Expect = 5.4
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 23 EQEVNTRALKQCYREAR-EEIDELRTLMKEQNDQLQD-YRVKYLQAQQL 163
E E N R + +E R EEI++ T + E +QLQ+ Y Y Q L
Sbjct: 759 ENESNQRMAECLEKETRREEIEKAYTRLNEYYNQLQEAYNNVYAQLAAL 807
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 17 AFEQEVNTRALKQCYREARE-EIDELRTLMKEQNDQLQDY 133
A +QE RA ++ + E + ELR EQ+ QLQD+
Sbjct: 1250 ALDQEAKLRADQERIAKGYEVQTSELRLKADEQSRQLQDF 1289
>U50311-5|AAX22295.1| 299|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform c protein.
Length = 299
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 118 IILFFHQGSQFIDFFSCLPVTLLQGSRVYFLFKRLFL 8
++LF G Q ++ ++ +PV + S + F+F R+ L
Sbjct: 224 VVLFVLYGKQIVNMYAGIPVNIACASNI-FVFYRINL 259
>U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform b protein.
Length = 589
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 118 IILFFHQGSQFIDFFSCLPVTLLQGSRVYFLFKRLFL 8
++LF G Q ++ ++ +PV + S + F+F R+ L
Sbjct: 514 VVLFVLYGKQIVNMYAGIPVNIACASNI-FVFYRINL 549
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 44 ALKQCYREAREEIDELRTLMKEQNDQLQDYRVK 142
A ++ REA E + + R ++ +ND+L++ R K
Sbjct: 1684 AEREQLREANEGLMQARKQLELENDELEELRAK 1716
>U28971-2|AAA68377.1| 180|Caenorhabditis elegans Hypothetical
protein B0244.9 protein.
Length = 180
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 71 VPPCNIASGLSCLLLVQTLVPWI 3
VP I GLSC L++ TL WI
Sbjct: 47 VPTKFIMFGLSCFLVILTLSLWI 69
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 71 REEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEEQRR 181
REE+ E R + QLQD + L+AQ L E R
Sbjct: 189 REELIETRAAKEHTEQQLQD-EITVLRAQILEERAHR 224
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical
protein C29A12.4 protein.
Length = 1560
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 26 QEVNTRALKQCYREAREEIDELRTLMKEQNDQ 121
+EVN + + C ++ R +ID R L+ DQ
Sbjct: 411 KEVNRVSFRGCMKKVRYDIDATRILLVNLADQ 442
>AL032631-1|CAB63336.1| 453|Caenorhabditis elegans Hypothetical
protein Y106G6H.1 protein.
Length = 453
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 68 AREEIDELRTLMKEQNDQLQDYRVKYL 148
A EID L +LM DQ++ Y + L
Sbjct: 44 ASREIDRLVSLMSNSKDQIKGYNAEKL 70
>AF043702-6|AAK21497.2| 306|Caenorhabditis elegans Hypothetical
protein W03D8.2 protein.
Length = 306
Score = 25.0 bits (52), Expect = 7.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -1
Query: 88 FIDFFSCLPVTLLQGSRVY 32
FID F+C+P+ + G +V+
Sbjct: 116 FIDTFNCMPLAAVIGGKVF 134
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 11 EQAFEQEVNTRALKQCYREAREEIDELRTLMKEQNDQLQDYRVK 142
++ F++E+ +Q +E EE+ + TLMK + ++ Q + K
Sbjct: 136 QRNFKEEIEA-IRRQLEKEVNEEVKQKATLMKTEREKHQKSQEK 178
>Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 74 EEIDELRTLMKEQNDQLQDYR 136
+EI ELR +K D+L YR
Sbjct: 569 QEIKELRITLKSSEDELHRYR 589
>Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 74 EEIDELRTLMKEQNDQLQDYR 136
+EI ELR +K D+L YR
Sbjct: 569 QEIKELRITLKSSEDELHRYR 589
>Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical
protein C14B1.6 protein.
Length = 793
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 65 EAREEIDELRTLMKEQNDQLQDYRVKYLQAQQLVEEQR 178
E EE E L+KE+ ++ + + +YL+ + E QR
Sbjct: 17 EDEEERQERARLLKEKEEEREACKKRYLERIEREEAQR 54
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 100 QGSQFIDFFSCLPVTLLQGSRVY 32
QGS++I F L + L+GSR+Y
Sbjct: 6449 QGSKYIKQFLTLSLPPLEGSRMY 6471
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 24.6 bits (51), Expect = 9.4
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 29 EVNTRALKQCYREAREEIDELRTLMKEQNDQLQDYRVKYLQ-AQQLVEEQR 178
EV R K R +EE DE R L KE+ D Q + + ++ +QL+ + +
Sbjct: 1102 EVKEREEKSLARHEKEEEDEKRRL-KEEEDVKQLNKERAMEREEQLIGDMK 1151
>AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 74 EEIDELRTLMKEQNDQLQDYR 136
+EI ELR +K D+L YR
Sbjct: 569 QEIKELRITLKSSEDELHRYR 589
>AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 74 EEIDELRTLMKEQNDQLQDYR 136
+EI ELR +K D+L YR
Sbjct: 569 QEIKELRITLKSSEDELHRYR 589
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,497,266
Number of Sequences: 27780
Number of extensions: 47058
Number of successful extensions: 293
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 12,740,198
effective HSP length: 40
effective length of database: 11,628,998
effective search space used: 220950962
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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