Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_K08
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.6  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   8.1  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   8.1  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   8.1  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   8.1  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   8.1  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 495 YLVNVFYIITMIYG*RYKEKAY 430
           +++NV Y++T+ Y   Y  + Y
Sbjct: 105 FVINVLYVLTLCYAVYYWRQQY 126


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 598  FSCTLYKIIYFTTV 557
            F+C  Y +IY+ TV
Sbjct: 999  FNCLKYGVIYYVTV 1012


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 598  FSCTLYKIIYFTTV 557
            F+C  Y +IY+ TV
Sbjct: 999  FNCLKYGVIYYVTV 1012


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 138 CPPFPIYHQPTLLVVVSNICSRTRSVHQ 221
           C  F +     L VVV N   RT  +H+
Sbjct: 280 CIMFMVASSVVLTVVVLNYHHRTADIHE 307


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 138 CPPFPIYHQPTLLVVVSNICSRTRSVHQ 221
           C  F +     L VVV N   RT  +H+
Sbjct: 280 CIMFMVASSVVLTVVVLNYHHRTADIHE 307


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 138 CPPFPIYHQPTLLVVVSNICSRTRSVHQ 221
           C  F +     L VVV N   RT  +H+
Sbjct: 280 CIMFMVASSVVLTVVVLNYHHRTADIHE 307


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 138 CPPFPIYHQPTLLVVVSNICSRTRSVHQ 221
           C  F +     L VVV N   RT  +H+
Sbjct: 280 CIMFMVASSVVLTVVVLNYHHRTADIHE 307


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 138 CPPFPIYHQPTLLVVVSNICSRTRSVHQ 221
           C  F +     L VVV N   RT  +H+
Sbjct: 280 CIMFMVASSVVLTVVVLNYHHRTADIHE 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,290
Number of Sequences: 336
Number of extensions: 3277
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)