Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_K02
(525 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 36 0.12
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 36 0.12
BC001940-1|AAH01940.2| 748|Homo sapiens hypothetical protein DK... 31 2.5
AK074809-1|BAC11221.1| 748|Homo sapiens protein ( Homo sapiens ... 31 2.5
AB162218-1|BAD36741.1| 748|Homo sapiens hFLEG1 protein. 31 2.5
L36531-1|AAA93514.1| 1025|Homo sapiens integrin alpha 8 subunit ... 31 3.3
AY371697-1|AAQ56848.2| 1063|Homo sapiens integrin, alpha 8 protein. 31 3.3
AL590636-1|CAI14955.1| 1063|Homo sapiens integrin, alpha 8 protein. 31 3.3
AL359645-1|CAH73424.1| 1063|Homo sapiens integrin, alpha 8 protein. 31 3.3
AF179681-1|AAF72107.1| 1156|Homo sapiens unknown protein. 30 5.7
BC113713-1|AAI13714.2| 420|Homo sapiens neuropeptide FF recepto... 29 7.6
BC101636-1|AAI01637.1| 420|Homo sapiens neuropeptide FF recepto... 29 7.6
AF330053-1|AAK94197.1| 420|Homo sapiens neuropeptide NPFF recep... 29 7.6
AF268899-1|AAG41398.1| 420|Homo sapiens neuropeptide FF recepto... 29 7.6
AF257210-1|AAF87078.1| 420|Homo sapiens G-protein coupled recep... 29 7.6
AF236083-1|AAK58513.1| 408|Homo sapiens G-protein-coupled recep... 29 7.6
AF119815-1|AAD22047.1| 522|Homo sapiens G-protein-coupled recep... 29 7.6
Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase... 29 10.0
AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 29 10.0
AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 29 10.0
AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 29 10.0
AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein. 29 10.0
AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein. 29 10.0
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 35.5 bits (78), Expect = 0.12
Identities = 24/79 (30%), Positives = 37/79 (46%)
Frame = -2
Query: 314 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPA 135
T PG S+ T T S +TP++++ + V + + F + ++ +TP
Sbjct: 313 TSHSTPGFTSSITTTE---TTSESTPSLSSSTIYSTVSTSTTAITSHFTT--SETAVTPT 367
Query: 134 PEVPSELSVRAPCASLRTL 78
P PS LS P SLRTL
Sbjct: 368 PVTPSSLSTDIPTTSLRTL 386
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 35.5 bits (78), Expect = 0.12
Identities = 24/79 (30%), Positives = 37/79 (46%)
Frame = -2
Query: 314 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPA 135
T PG S+ T T S +TP++++ + V + + F + ++ +TP
Sbjct: 313 TSHSTPGFTSSITTTE---TTSESTPSLSSSTIYSTVSTSTTAITSHFTT--SETAVTPT 367
Query: 134 PEVPSELSVRAPCASLRTL 78
P PS LS P SLRTL
Sbjct: 368 PVTPSSLSTDIPTTSLRTL 386
>BC001940-1|AAH01940.2| 748|Homo sapiens hypothetical protein
DKFZp762E1312 protein.
Length = 748
Score = 31.1 bits (67), Expect = 2.5
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 281 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 189
VR+TP P S A+PAV AP +C + K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202
>AK074809-1|BAC11221.1| 748|Homo sapiens protein ( Homo sapiens
cDNA FLJ90328 fis, clone NT2RP2001921. ).
Length = 748
Score = 31.1 bits (67), Expect = 2.5
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 281 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 189
VR+TP P S A+PAV AP +C + K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202
>AB162218-1|BAD36741.1| 748|Homo sapiens hFLEG1 protein.
Length = 748
Score = 31.1 bits (67), Expect = 2.5
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 281 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 189
VR+TP P S A+PAV AP +C + K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202
>L36531-1|AAA93514.1| 1025|Homo sapiens integrin alpha 8 subunit
protein.
Length = 1025
Score = 30.7 bits (66), Expect = 3.3
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Frame = +1
Query: 49 YEEPELLTSSRVRRDAHGALT----LNSDGTSGAGVKVPFAGNDKNIVSAIGSLDLTNRQ 216
+ +P++LT + A+ LN DG + + VPFAG D+ G + + N
Sbjct: 333 FRDPQILTGTETFGRFGSAMAHLGDLNQDGYNDIAIGVPFAGKDQR-----GKVLIYNGN 387
Query: 217 KLGAATAGVALDNVNGHGVSLTDTHIPGFGDKVTAAGKVNLFHNDXHDITAKAFAT 384
K G T + GV + GFG T G ++ ND D+ AF T
Sbjct: 388 KDGLNTKPSQV----LQGVWASHAVPSGFG--FTLRGDSDIDKNDYPDLIVGAFGT 437
>AY371697-1|AAQ56848.2| 1063|Homo sapiens integrin, alpha 8 protein.
Length = 1063
Score = 30.7 bits (66), Expect = 3.3
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Frame = +1
Query: 49 YEEPELLTSSRVRRDAHGALT----LNSDGTSGAGVKVPFAGNDKNIVSAIGSLDLTNRQ 216
+ +P++LT + A+ LN DG + + VPFAG D+ G + + N
Sbjct: 371 FRDPQILTGTETFGRFGSAMAHLGDLNQDGYNDIAIGVPFAGKDQR-----GKVLIYNGN 425
Query: 217 KLGAATAGVALDNVNGHGVSLTDTHIPGFGDKVTAAGKVNLFHNDXHDITAKAFAT 384
K G T + GV + GFG T G ++ ND D+ AF T
Sbjct: 426 KDGLNTKPSQV----LQGVWASHAVPSGFG--FTLRGDSDIDKNDYPDLIVGAFGT 475
>AL590636-1|CAI14955.1| 1063|Homo sapiens integrin, alpha 8 protein.
Length = 1063
Score = 30.7 bits (66), Expect = 3.3
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Frame = +1
Query: 49 YEEPELLTSSRVRRDAHGALT----LNSDGTSGAGVKVPFAGNDKNIVSAIGSLDLTNRQ 216
+ +P++LT + A+ LN DG + + VPFAG D+ G + + N
Sbjct: 371 FRDPQILTGTETFGRFGSAMAHLGDLNQDGYNDIAIGVPFAGKDQR-----GKVLIYNGN 425
Query: 217 KLGAATAGVALDNVNGHGVSLTDTHIPGFGDKVTAAGKVNLFHNDXHDITAKAFAT 384
K G T + GV + GFG T G ++ ND D+ AF T
Sbjct: 426 KDGLNTKPSQV----LQGVWASHAVPSGFG--FTLRGDSDIDKNDYPDLIVGAFGT 475
>AL359645-1|CAH73424.1| 1063|Homo sapiens integrin, alpha 8 protein.
Length = 1063
Score = 30.7 bits (66), Expect = 3.3
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Frame = +1
Query: 49 YEEPELLTSSRVRRDAHGALT----LNSDGTSGAGVKVPFAGNDKNIVSAIGSLDLTNRQ 216
+ +P++LT + A+ LN DG + + VPFAG D+ G + + N
Sbjct: 371 FRDPQILTGTETFGRFGSAMAHLGDLNQDGYNDIAIGVPFAGKDQR-----GKVLIYNGN 425
Query: 217 KLGAATAGVALDNVNGHGVSLTDTHIPGFGDKVTAAGKVNLFHNDXHDITAKAFAT 384
K G T + GV + GFG T G ++ ND D+ AF T
Sbjct: 426 KDGLNTKPSQV----LQGVWASHAVPSGFG--FTLRGDSDIDKNDYPDLIVGAFGT 475
>AF179681-1|AAF72107.1| 1156|Homo sapiens unknown protein.
Length = 1156
Score = 29.9 bits (64), Expect = 5.7
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -2
Query: 263 PFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKG-TLTPAPEVPSELSVRAPCASL 87
P T TP + PSF V + PI++ + P TL P P + + P S
Sbjct: 492 PLTSDPPTPPSSTPSFKPPVTRESPISMCVDSPPPLSFLTLLPVPSTGTSVITSKPMNST 551
Query: 86 RTLELVNSSGSS 51
+ V ++ S+
Sbjct: 552 SVISTVTTNASA 563
>BC113713-1|AAI13714.2| 420|Homo sapiens neuropeptide FF receptor 2
protein.
Length = 420
Score = 29.5 bits (63), Expect = 7.6
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -2
Query: 401 ISGIFLVAKAFAVMSWXSLWKRFTLPAAVTLSPNPGMCVSVRLTPWPFTLSSATPAV 231
I + +VA F ++SW LW L LSPN +++ + P+ L+ +V
Sbjct: 273 IKMLLIVALLF-ILSWLPLWTLMMLSDYADLSPNELQIINIYIYPFAHWLAFGNSSV 328
>BC101636-1|AAI01637.1| 420|Homo sapiens neuropeptide FF receptor 2
protein.
Length = 420
Score = 29.5 bits (63), Expect = 7.6
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -2
Query: 401 ISGIFLVAKAFAVMSWXSLWKRFTLPAAVTLSPNPGMCVSVRLTPWPFTLSSATPAV 231
I + +VA F ++SW LW L LSPN +++ + P+ L+ +V
Sbjct: 273 IKMLLIVALLF-ILSWLPLWTLMMLSDYADLSPNELQIINIYIYPFAHWLAFGNSSV 328
>AF330053-1|AAK94197.1| 420|Homo sapiens neuropeptide NPFF receptor
protein.
Length = 420
Score = 29.5 bits (63), Expect = 7.6
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -2
Query: 401 ISGIFLVAKAFAVMSWXSLWKRFTLPAAVTLSPNPGMCVSVRLTPWPFTLSSATPAV 231
I + +VA F ++SW LW L LSPN +++ + P+ L+ +V
Sbjct: 273 IKMLLIVALLF-ILSWLPLWTLMMLSDYADLSPNELQIINIYIYPFAHWLAFGNSSV 328
>AF268899-1|AAG41398.1| 420|Homo sapiens neuropeptide FF receptor 2
protein.
Length = 420
Score = 29.5 bits (63), Expect = 7.6
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -2
Query: 401 ISGIFLVAKAFAVMSWXSLWKRFTLPAAVTLSPNPGMCVSVRLTPWPFTLSSATPAV 231
I + +VA F ++SW LW L LSPN +++ + P+ L+ +V
Sbjct: 273 IKMLLIVALLF-ILSWLPLWTLMMLSDYADLSPNELQIINIYIYPFAHWLAFGNSSV 328
>AF257210-1|AAF87078.1| 420|Homo sapiens G-protein coupled receptor
HLWAR77 protein.
Length = 420
Score = 29.5 bits (63), Expect = 7.6
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -2
Query: 401 ISGIFLVAKAFAVMSWXSLWKRFTLPAAVTLSPNPGMCVSVRLTPWPFTLSSATPAV 231
I + +VA F ++SW LW L LSPN +++ + P+ L+ +V
Sbjct: 273 IKMLLIVALLF-ILSWLPLWTLMMLSDYADLSPNELQIINIYIYPFAHWLAFGNSSV 328
>AF236083-1|AAK58513.1| 408|Homo sapiens G-protein-coupled receptor
74 protein.
Length = 408
Score = 29.5 bits (63), Expect = 7.6
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -2
Query: 401 ISGIFLVAKAFAVMSWXSLWKRFTLPAAVTLSPNPGMCVSVRLTPWPFTLSSATPAV 231
I + +VA F ++SW LW L LSPN +++ + P+ L+ +V
Sbjct: 276 IKMLLIVALLF-ILSWLPLWTLMMLSDYADLSPNELQIINIYIYPFAHWLAFGNSSV 331
>AF119815-1|AAD22047.1| 522|Homo sapiens G-protein-coupled receptor
protein.
Length = 522
Score = 29.5 bits (63), Expect = 7.6
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -2
Query: 401 ISGIFLVAKAFAVMSWXSLWKRFTLPAAVTLSPNPGMCVSVRLTPWPFTLSSATPAV 231
I + +VA F ++SW LW L LSPN +++ + P+ L+ +V
Sbjct: 375 IKMLLIVALLF-ILSWLPLWTLMMLSDYADLSPNELQIINIYIYPFAHWLAFGNSSV 430
>Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase II
transcription factor protein.
Length = 1083
Score = 29.1 bits (62), Expect = 10.0
Identities = 27/76 (35%), Positives = 32/76 (42%)
Frame = -2
Query: 326 PAAVTLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGT 147
PAA+ P P +V TP PF ++A PA AAPS P A PA T
Sbjct: 220 PAALLPLPKPAAPGTVIQTP-PFVGAAAPPAPAAPSPPAAPAPAAPAAAPP-PPPPAPAT 277
Query: 146 LTPAPEVPSELSVRAP 99
L P P+ AP
Sbjct: 278 LARPPGHPAGPPTAAP 293
>AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 29.1 bits (62), Expect = 10.0
Identities = 27/76 (35%), Positives = 32/76 (42%)
Frame = -2
Query: 326 PAAVTLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGT 147
PAA+ P P +V TP PF ++A PA AAPS P A PA T
Sbjct: 222 PAALLPLPKPAAPGTVIQTP-PFVGAAAPPAPAAPSPPAAPAPAAPAAAPP-PPPPAPAT 279
Query: 146 LTPAPEVPSELSVRAP 99
L P P+ AP
Sbjct: 280 LARPPGHPAGPPTAAP 295
>AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 29.1 bits (62), Expect = 10.0
Identities = 27/76 (35%), Positives = 32/76 (42%)
Frame = -2
Query: 326 PAAVTLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGT 147
PAA+ P P +V TP PF ++A PA AAPS P A PA T
Sbjct: 222 PAALLPLPKPAAPGTVIQTP-PFVGAAAPPAPAAPSPPAAPAPAAPAAAPP-PPPPAPAT 279
Query: 146 LTPAPEVPSELSVRAP 99
L P P+ AP
Sbjct: 280 LARPPGHPAGPPTAAP 295
>AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 29.1 bits (62), Expect = 10.0
Identities = 27/76 (35%), Positives = 32/76 (42%)
Frame = -2
Query: 326 PAAVTLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGT 147
PAA+ P P +V TP PF ++A PA AAPS P A PA T
Sbjct: 222 PAALLPLPKPAAPGTVIQTP-PFVGAAAPPAPAAPSPPAAPAPAAPAAAPP-PPPPAPAT 279
Query: 146 LTPAPEVPSELSVRAP 99
L P P+ AP
Sbjct: 280 LARPPGHPAGPPTAAP 295
>AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein.
Length = 877
Score = 29.1 bits (62), Expect = 10.0
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2
Query: 146 LTPAPEVPSELSVRAPCASLRTL 78
+TP P PS LS P SLRTL
Sbjct: 24 VTPTPVTPSSLSTDIPTTSLRTL 46
>AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 29.1 bits (62), Expect = 10.0
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2
Query: 146 LTPAPEVPSELSVRAPCASLRTL 78
+TP P PS LS P SLRTL
Sbjct: 24 VTPTPVTPSSLSTDIPTTSLRTL 46
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.315 0.133 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,810,912
Number of Sequences: 237096
Number of extensions: 1817446
Number of successful extensions: 4151
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4151
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -