Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_J23
(280 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 27 0.65
SPAC26H5.06 |pot1||telomere end-binding protein Pot1 |Schizosacc... 26 1.1
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 26 1.1
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 24 3.5
SPAC2E1P5.04c |cwg2|orb7|geranylgeranyltransferase I beta subuni... 24 3.5
SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces pomb... 24 3.5
SPBC336.14c |ppk26||serine/threonine protein kinase Ppk26|Schizo... 24 4.6
SPBC947.06c |||spermidine family transporter |Schizosaccharomyce... 24 4.6
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 24 4.6
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 23 6.1
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 23 6.1
SPCC306.05c |ins1||INSIG domain protein|Schizosaccharomyces pomb... 23 6.1
SPBC16A3.10 |||membrane bound O-acyltransferase, MBOAT |Schizosa... 23 6.1
SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces ... 23 8.0
SPBPB21E7.07 |aes1|SPAPB21E7.07, SPAPB21E7.07|enhancer of RNA-me... 23 8.0
SPBC4F6.09 |str1||siderophore-iron transporter Str1 |Schizosacch... 23 8.0
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 26.6 bits (56), Expect = 0.65
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 106 TYRRFPSYGSHVREFPRCCISTADCKMWFI 17
++RRFP +G + RE C WFI
Sbjct: 467 SHRRFPDWGDYQREVTCCRNCVERSTTWFI 496
>SPAC26H5.06 |pot1||telomere end-binding protein Pot1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 555
Score = 25.8 bits (54), Expect = 1.1
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +2
Query: 176 SASERDTTIADPIPKIVRLGDK 241
S++ +DT P+P++++ GDK
Sbjct: 136 SSNSKDTLCPQPMPRLMKTGDK 157
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.8 bits (54), Expect = 1.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1
Query: 241 LIAKSDYLGNRISNCGISFG 182
LIAK ++LGNRIS S+G
Sbjct: 486 LIAKCEFLGNRISKGMASWG 505
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 24.2 bits (50), Expect = 3.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 155 LTAAHCSSASERDTTIAD 208
L AAHC+ E+ TT+ +
Sbjct: 799 LVAAHCNEKKEKSTTVQE 816
>SPAC2E1P5.04c |cwg2|orb7|geranylgeranyltransferase I beta subunit
Cwg2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 355
Score = 24.2 bits (50), Expect = 3.5
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 32 AIGGRDTTPGEFP 70
A+GG TPGEFP
Sbjct: 296 ALGGFSKTPGEFP 308
>SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1136
Score = 24.2 bits (50), Expect = 3.5
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 83 IGWKASIGTWIFKCGSSL-ISEKFVLTAAH-CSSASERDTTIADPIPKIVRLGD 238
I WK+++ T I KC SL E F +H S S + T D +P + GD
Sbjct: 365 IAWKSNLNTVIQKCNLSLDQDESFSCVWSHSLDSFSLIEKTFFD-VPTNMSSGD 417
>SPBC336.14c |ppk26||serine/threonine protein kinase
Ppk26|Schizosaccharomyces pombe|chr 2|||Manual
Length = 589
Score = 23.8 bits (49), Expect = 4.6
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 89 WKASIG--TWIFKCGSSLISEKFVLTAAHCSSASERDTTIADPIPKI 223
+K IG +W +KC SS+ +VL S + DT+ D + +
Sbjct: 230 YKEQIGFSSWTYKCTSSIDGNAYVLKRLQDCSIN-IDTSTVDKLKNV 275
>SPBC947.06c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 498
Score = 23.8 bits (49), Expect = 4.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 32 AIGGRDTTPGEFPHMGAIGWKASIGTWIF 118
A GG+ P M A+GW G ++F
Sbjct: 357 ANGGKPLPEQRLPLMMAVGWLMPAGIFVF 385
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 23.8 bits (49), Expect = 4.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 69 GNSPGVVSRPPIAKCGSLG 13
GN+PG + PPI K S+G
Sbjct: 540 GNTPGHRNVPPILKRSSIG 558
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 23.4 bits (48), Expect = 6.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 6 TEAPMNHILQSAVEIQHLGNSL 71
T+AP + SA+EI HL N L
Sbjct: 117 TKAPKCSLPTSALEIDHLNNFL 138
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 23.4 bits (48), Expect = 6.1
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +2
Query: 38 GGRDTTPGEFPHMGAIGWKASIGTWIFKCGSSLISEKFVLTAAH 169
GG+ P E ++G G A T I SS K VLT H
Sbjct: 473 GGKLAVPKEELYLGNAGTAARFLTGIAALVSSKDGAKVVLTGNH 516
>SPCC306.05c |ins1||INSIG domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 281
Score = 23.4 bits (48), Expect = 6.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 200 LWYLFRRHSNNGLLLEQTSHLLAN 129
+WY+F R S NG++L + +L +
Sbjct: 212 IWYIFDR-SRNGIILSTITSVLGS 234
>SPBC16A3.10 |||membrane bound O-acyltransferase, MBOAT
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 23.4 bits (48), Expect = 6.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 89 WKASIGTWIFKCGSSLISEKFVLTAAHCSS 178
W+ + +F GSS+ KF+LT SS
Sbjct: 222 WRGLLWLILFITGSSIYPLKFLLTPKFASS 251
>SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 501
Score = 23.0 bits (47), Expect = 8.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 264 LEPASKMFLSPSLTILGIGSAIVVSL 187
L+P + ++SPS + GS IV+ L
Sbjct: 85 LDPYNLNYVSPSTVVFQRGSVIVLEL 110
>SPBPB21E7.07 |aes1|SPAPB21E7.07, SPAPB21E7.07|enhancer of
RNA-mediated gene silencing |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 296
Score = 23.0 bits (47), Expect = 8.0
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -1
Query: 271 ISTRTRI*NVLIAKSDY-LGNRISNCGISFGGTRTMGCC 158
+S T + I K+DY L C +SF G T+G C
Sbjct: 45 LSETTFVQKPTIDKADYRLRIFTPECELSFAGHPTIGSC 83
>SPBC4F6.09 |str1||siderophore-iron transporter Str1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 612
Score = 23.0 bits (47), Expect = 8.0
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = -2
Query: 222 ILGIGSAIVVSLSEALEQWAAVRTNFSLISEL 127
I+GIG ++ +L Q NF++++ L
Sbjct: 469 IVGIGGGVIANLLTVAVQTVVSTENFAIVTAL 500
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,293,456
Number of Sequences: 5004
Number of extensions: 24074
Number of successful extensions: 59
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 61566900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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