Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_J19
(563 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032658-4|CAA21746.1| 283|Caenorhabditis elegans Hypothetical ... 28 5.3
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 27 9.3
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z74043-5|CAA98544.1| 588|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 27 9.3
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 27 9.3
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 9.3
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 9.3
>AL032658-4|CAA21746.1| 283|Caenorhabditis elegans Hypothetical
protein Y76A2B.5 protein.
Length = 283
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 285 RRNSSRCPNISNYPYDCLVNFASSPCMLR 199
R+NS PN S YP+ V+FA P +R
Sbjct: 40 RQNSLLGPNDSQYPFQGDVSFAHKPLSIR 68
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 27.1 bits (57), Expect = 9.3
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +2
Query: 143 SADQPGDNPAHRYSDL*DERSMHGDDAKFTRQSYG*FEILGHRDEFRRRWQRESLRRFWM 322
SA + + + SD D HGDDAK + Q Y FE +D+ W +S ++
Sbjct: 186 SAKEYFEQAKEKASDALDSAQKHGDDAKESAQGY--FE--QAKDKSSEIW--DSAKKHGE 239
Query: 323 ASRRSAHDRLQQ 358
+ SA D +Q
Sbjct: 240 EASDSAKDYFEQ 251
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 27.1 bits (57), Expect = 9.3
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +2
Query: 143 SADQPGDNPAHRYSDL*DERSMHGDDAKFTRQSYG*FEILGHRDEFRRRWQRESLRRFWM 322
SA + + + SD D HGDDAK + Q Y FE +D+ W +S ++
Sbjct: 186 SAKEYFEQAKEKASDALDSAQKHGDDAKESAQGY--FE--QAKDKSSEIW--DSAKKHGE 239
Query: 323 ASRRSAHDRLQQ 358
+ SA D +Q
Sbjct: 240 EASDSAKDYFEQ 251
>Z74043-5|CAA98544.1| 588|Caenorhabditis elegans Hypothetical
protein T19B10.9 protein.
Length = 588
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 237 NHMDNLKYWDIGMNFVVGGNGKVYEGSGWLHVG 335
N ++ W +G N + + V EGSG+L+VG
Sbjct: 453 NESMSVSPWQLGSNRIGNPHTGVREGSGFLYVG 485
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 27.1 bits (57), Expect = 9.3
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +2
Query: 143 SADQPGDNPAHRYSDL*DERSMHGDDAKFTRQSYG*FEILGHRDEFRRRWQRESLRRFWM 322
SA + + + SD D HGDDAK + Q Y FE +D+ W +S ++
Sbjct: 186 SAKEYFEQAKEKASDALDSAQKHGDDAKESAQGY--FE--QAKDKSSEIW--DSAKKHGE 239
Query: 323 ASRRSAHDRLQQ 358
+ SA D +Q
Sbjct: 240 EASDSAKDYFEQ 251
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 27.1 bits (57), Expect = 9.3
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +2
Query: 143 SADQPGDNPAHRYSDL*DERSMHGDDAKFTRQSYG*FEILGHRDEFRRRWQRESLRRFWM 322
SA + + + SD D HGDDAK + Q Y FE +D+ W +S ++
Sbjct: 186 SAKEYFEQAKEKASDALDSAQKHGDDAKESAQGY--FE--QAKDKSSEIW--DSAKKHGE 239
Query: 323 ASRRSAHDRLQQ 358
+ SA D +Q
Sbjct: 240 EASDSAKDYFEQ 251
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 9.3
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 120 PVHIEYLPRPISLVIIQHTVTPTCETNEACMVTMRSLQDNHMD-NLKYWD 266
P + Y RP +II + P TNE M+ +RSL D +D + +WD
Sbjct: 31 PKPMSYQSRPSHRIIIFYL--PIECTNEEIMLIIRSLSDRIVDICVDWWD 78
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 9.3
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 120 PVHIEYLPRPISLVIIQHTVTPTCETNEACMVTMRSLQDNHMD-NLKYWD 266
P + Y RP +II + P TNE M+ +RSL D +D + +WD
Sbjct: 322 PKPMSYQSRPSHRIIIFYL--PIECTNEEIMLIIRSLSDRIVDICVDWWD 369
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 9.3
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 120 PVHIEYLPRPISLVIIQHTVTPTCETNEACMVTMRSLQDNHMD-NLKYWD 266
P + Y RP +II + P TNE M+ +RSL D +D + +WD
Sbjct: 337 PKPMSYQSRPSHRIIIFYL--PIECTNEEIMLIIRSLSDRIVDICVDWWD 384
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 9.3
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 120 PVHIEYLPRPISLVIIQHTVTPTCETNEACMVTMRSLQDNHMD-NLKYWD 266
P + Y RP +II + P TNE M+ +RSL D +D + +WD
Sbjct: 337 PKPMSYQSRPSHRIIIFYL--PIECTNEEIMLIIRSLSDRIVDICVDWWD 384
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 9.3
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 120 PVHIEYLPRPISLVIIQHTVTPTCETNEACMVTMRSLQDNHMD-NLKYWD 266
P + Y RP +II + P TNE M+ +RSL D +D + +WD
Sbjct: 31 PKPMSYQSRPSHRIIIFYL--PIECTNEEIMLIIRSLSDRIVDICVDWWD 78
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 9.3
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 120 PVHIEYLPRPISLVIIQHTVTPTCETNEACMVTMRSLQDNHMD-NLKYWD 266
P + Y RP +II + P TNE M+ +RSL D +D + +WD
Sbjct: 322 PKPMSYQSRPSHRIIIFYL--PIECTNEEIMLIIRSLSDRIVDICVDWWD 369
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 9.3
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 120 PVHIEYLPRPISLVIIQHTVTPTCETNEACMVTMRSLQDNHMD-NLKYWD 266
P + Y RP +II + P TNE M+ +RSL D +D + +WD
Sbjct: 337 PKPMSYQSRPSHRIIIFYL--PIECTNEEIMLIIRSLSDRIVDICVDWWD 384
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 9.3
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 120 PVHIEYLPRPISLVIIQHTVTPTCETNEACMVTMRSLQDNHMD-NLKYWD 266
P + Y RP +II + P TNE M+ +RSL D +D + +WD
Sbjct: 337 PKPMSYQSRPSHRIIIFYL--PIECTNEEIMLIIRSLSDRIVDICVDWWD 384
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,950,298
Number of Sequences: 27780
Number of extensions: 304218
Number of successful extensions: 786
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -