Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_J18
         (406 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_1123| Best HMM Match : SKIP_SNW (HMM E-Value=1.9)                   28   2.5  
SB_18871| Best HMM Match : RVT_1 (HMM E-Value=0)                       28   2.5  
SB_23471| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.3  
SB_57169| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.4  
SB_45960| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.4  
SB_28020| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.4  
SB_19657| Best HMM Match : APC8 (HMM E-Value=4.9)                      27   4.4  
SB_55567| Best HMM Match : Ribosomal_L17 (HMM E-Value=1.8)             27   4.4  
SB_50615| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.4  
SB_46850| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.4  
SB_30867| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.4  
SB_24630| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.4  
SB_22009| Best HMM Match : Vicilin_N (HMM E-Value=0.6)                 27   4.4  
SB_17277| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.4  
SB_17276| Best HMM Match : E-MAP-115 (HMM E-Value=0.57)                27   4.4  

>SB_1123| Best HMM Match : SKIP_SNW (HMM E-Value=1.9)
          Length = 204

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 244 PRLLSLVMHLYQYFLGCVSGKLQSSNRNLLFCYILKHSYSW 366
           P  +SL  H   YFL    G+ + S  N +F  +   +Y W
Sbjct: 18  PSKVSLFRHFQHYFLRPYDGQKRISGNNEMFDKLNTENYKW 58


>SB_18871| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 546

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 244 PRLLSLVMHLYQYFLGCVSGKLQSSNRNLLFCYILKHSYSW 366
           P  +SL  H   YFL    G+ + S  N +F  +   +Y W
Sbjct: 8   PSKVSLFRHFPHYFLRLYDGQKRISGNNEMFDKLNTENYKW 48


>SB_23471| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 73

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 244 PRLLSLVMHLYQYFLGCVSGKLQSSNRNLLFCYILKHSYSW 366
           P  +SL  H  +YFL    G+ + S  N +F  +   +Y W
Sbjct: 8   PSKVSLFRHFPRYFLRPYDGQKRISGNNEMFDKLNTENYKW 48


>SB_57169| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 148

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 244 PRLLSLVMHLYQYFLGCVSGKLQSSNRNLLFCYILKHSYSW 366
           P  +SL  H   YFL    G+ + S  N +F  +   +Y W
Sbjct: 8   PSKVSLFRHFPHYFLRPYDGQKRISGNNEMFDKLNTENYKW 48


>SB_45960| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 147

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 244 PRLLSLVMHLYQYFLGCVSGKLQSSNRNLLFCYILKHSYSW 366
           P  +SL  H   YFL    G+ + S  N +F  +   +Y W
Sbjct: 7   PSKVSLFRHFPHYFLRPYDGQKRISENNEMFDKLNTENYKW 47


>SB_28020| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 158

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 244 PRLLSLVMHLYQYFLGCVSGKLQSSNRNLLFCYILKHSYSW 366
           P  +SL  H   YFL    G+ + S  N +F  +   +Y W
Sbjct: 18  PSKVSLFRHFPHYFLRPYDGQKRISGNNEMFDKLNTENYKW 58


>SB_19657| Best HMM Match : APC8 (HMM E-Value=4.9)
          Length = 274

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 244 PRLLSLVMHLYQYFLGCVSGKLQSSNRNLLFCYILKHSYSW 366
           P  +SL  H   YFL    G+ + S  N +F  +   +Y W
Sbjct: 134 PSKVSLFRHFPHYFLRPYDGQKRISGNNEMFDKLNTENYKW 174


>SB_55567| Best HMM Match : Ribosomal_L17 (HMM E-Value=1.8)
          Length = 204

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 244 PRLLSLVMHLYQYFLGCVSGKLQSSNRNLLFCYILKHSYSW 366
           P  +SL  H   YFL    G+ + S  N +F  +   +Y W
Sbjct: 18  PSKVSLFRHFPHYFLRPYDGQKRISGNNEMFDKLNTENYKW 58


>SB_50615| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 148

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 244 PRLLSLVMHLYQYFLGCVSGKLQSSNRNLLFCYILKHSYSW 366
           P  +SL  H   YFL    G+ + S  N +F  +   +Y W
Sbjct: 8   PSKVSLFRHFPHYFLRPYDGQKRISGNNEMFDKLNTENYKW 48


>SB_46850| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 148

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 244 PRLLSLVMHLYQYFLGCVSGKLQSSNRNLLFCYILKHSYSW 366
           P  +SL  H   YFL    G+ + S  N +F  +   +Y W
Sbjct: 8   PSKVSLFRHFPHYFLRPYDGQKRISGNNEMFDKLNTENYKW 48


>SB_30867| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 148

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 244 PRLLSLVMHLYQYFLGCVSGKLQSSNRNLLFCYILKHSYSW 366
           P  +SL  H   YFL    G+ + S  N +F  +   +Y W
Sbjct: 8   PSKVSLFRHFPHYFLRPYDGQKRISGNNEMFDKLNTENYKW 48


>SB_24630| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 218

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 244 PRLLSLVMHLYQYFLGCVSGKLQSSNRNLLFCYILKHSYSW 366
           P  +SL  H   YFL    G+ + S  N +F  +   +Y W
Sbjct: 8   PSKVSLFRHFPHYFLRPYDGQKRISGNNEMFDKLNTENYKW 48


>SB_22009| Best HMM Match : Vicilin_N (HMM E-Value=0.6)
          Length = 208

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 244 PRLLSLVMHLYQYFLGCVSGKLQSSNRNLLFCYILKHSYSW 366
           P  +SL  H   YFL    G+ + S  N +F  +   +Y W
Sbjct: 18  PSKVSLFRHFPHYFLRPYDGQKRISGNNEMFDKLNTENYKW 58


>SB_17277| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 290

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 244 PRLLSLVMHLYQYFLGCVSGKLQSSNRNLLFCYILKHSYSW 366
           P  +SL  H   YFL    G+ + S  N +F  +   +Y W
Sbjct: 150 PSKVSLFRHFPHYFLRPYDGQKRISGNNEMFDKLNTENYKW 190


>SB_17276| Best HMM Match : E-MAP-115 (HMM E-Value=0.57)
          Length = 618

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 244 PRLLSLVMHLYQYFLGCVSGKLQSSNRNLLFCYILKHSYSW 366
           P  +SL  H   YFL    G+ + S  N +F  +   +Y W
Sbjct: 7   PSKVSLFRHFPHYFLRPYDGQKRISENNEMFDKLNTENYKW 47


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,709,362
Number of Sequences: 59808
Number of extensions: 211037
Number of successful extensions: 330
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 727815563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)