Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_J17
(268 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0319 + 2503963-2504176,2504316-2504376,2504691-2504769,250... 29 0.67
07_03_0105 + 13455906-13457198 28 1.2
09_04_0078 + 14379720-14379786,14379903-14379974,14381093-143814... 27 2.1
02_03_0200 - 16282220-16282255,16283662-16284126,16284491-16284595 27 2.1
10_08_0295 - 16581014-16583071 26 3.6
08_02_0830 - 21617485-21618198 26 3.6
05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663 26 3.6
03_05_0252 - 22403504-22404676 26 3.6
01_06_0486 - 29729333-29729356,29729856-29730106,29730364-297304... 26 3.6
06_03_0065 - 16135582-16136001,16136308-16136376 26 4.8
04_04_1032 - 30259180-30260519,30260650-30260720,30261099-302621... 26 4.8
03_01_0608 + 4471738-4472115 26 4.8
02_04_0253 + 21310082-21310094,21310606-21311135 26 4.8
02_04_0249 + 21283004-21283016,21283526-21284055 26 4.8
02_04_0247 + 21273978-21273990,21274500-21275029 26 4.8
02_04_0245 + 21262645-21262754,21262851-21262997,21263100-212631... 26 4.8
01_05_0597 - 23526705-23526749,23526794-23526905,23527068-235271... 26 4.8
11_01_0031 + 248264-248513,248519-249007,249178-249445,249631-24... 25 6.3
10_03_0046 + 7357777-7357992 25 6.3
07_03_0730 + 21030123-21030338 25 6.3
06_03_0729 + 23927656-23927661,23927774-23927923,23928316-239285... 25 6.3
01_06_1064 + 34237919-34238155 25 6.3
01_05_0006 + 17008799-17009417,17010035-17010162,17010425-170106... 25 6.3
04_03_0558 + 17111138-17111996,17112474-17112564,17112647-171132... 25 8.3
03_05_0611 + 26113798-26114261,26114451-26114597,26114784-26115405 25 8.3
03_02_0182 - 6216991-6217238,6218076-6218197,6218412-6218497,621... 25 8.3
>05_01_0319 +
2503963-2504176,2504316-2504376,2504691-2504769,
2504861-2504940,2505046-2505140,2505748-2505847,
2506647-2506716,2507657-2507758,2507972-2508053,
2508257-2508304,2508841-2509009,2509089-2509314,
2509961-2510131,2510200-2510438,2510600-2510684,
2510778-2510876,2510954-2511153,2511232-2511307,
2511463-2511675,2511763-2511815,2511999-2512151,
2512474-2512606
Length = 915
Score = 28.7 bits (61), Expect = 0.67
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 68 RWWRL-PALTPPEHRLARASTDPGTLLMFR 154
RW RL PA PP R A A+ GT+++F+
Sbjct: 89 RWTRLHPAGEPPSPRAAHAAAAVGTMVVFQ 118
>07_03_0105 + 13455906-13457198
Length = 430
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -2
Query: 183 CSDGVRRWYCLNISSVPGSVEARARRCSGGVSAG 82
CS RRW L P ++A RC GG G
Sbjct: 71 CSQNARRWSRLVGLHQPSGLDAETCRCVGGTRDG 104
>09_04_0078 +
14379720-14379786,14379903-14379974,14381093-14381497,
14382835-14382911,14383016-14383135,14383227-14383997,
14384933-14385146,14385269-14385735
Length = 730
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = -2
Query: 168 RRWYCLNISSVPGSVEAR-----ARRCSGGVSAGKR 76
RRW L I SVPG+ R RC+ GV G+R
Sbjct: 89 RRWVGLEIDSVPGNEGQRDIVNYYLRCATGVGNGER 124
>02_03_0200 - 16282220-16282255,16283662-16284126,16284491-16284595
Length = 201
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 132 GSVEARARRCSGGVSAGKRHHRCN 61
G+VEA+ +GG G+ HHR N
Sbjct: 135 GAVEAKKGGAAGGGDDGRHHHRHN 158
>10_08_0295 - 16581014-16583071
Length = 685
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 264 DAGHFVFGCFAADNHVNGMTSFYRADSCSDGVRRWYCLNISSVPG 130
D G F ++AD HV+ ++R C +G+ + Y N + + G
Sbjct: 100 DGGRFTITPWSADRHVHHPNWWFRVRLCLEGLPQ-YAWNRAGLEG 143
>08_02_0830 - 21617485-21618198
Length = 237
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 195 RADSCSDGVRRWYCLNISSVPGSVEARARRCSGGVSAGK 79
RADSC RW GS + + R GG+S G+
Sbjct: 90 RADSCE----RWDAHKNKKAGGSAASSSSRARGGISPGR 124
>05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663
Length = 741
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 264 DAGHFVFGCFAADNHVNGMTSFYRADSCSDGVRRWYCLNISSVPG 130
D G F ++AD HV+ ++R C +G+ + Y N + + G
Sbjct: 450 DGGRFTITPWSADRHVHHPNWWFRVRLCLEGLPQ-YAWNRAGLEG 493
>03_05_0252 - 22403504-22404676
Length = 390
Score = 26.2 bits (55), Expect = 3.6
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 69 GGGAYQRLPHRSTA*RVLRLIPARC*CSDSTSALHH---HYSCQLGKSWSFH 215
GGG + R R+ R+L C + AL Y CQLG++ +FH
Sbjct: 41 GGGDFGRAVARAAVARMLEAAGFVCAHRSAVDALVDVLLRYICQLGRAATFH 92
>01_06_0486 -
29729333-29729356,29729856-29730106,29730364-29730466,
29730571-29730663,29730773-29730905,29731184-29731272,
29731385-29731553,29731930-29732016,29732388-29732506,
29732554-29732706
Length = 406
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -2
Query: 201 FYRADSCSDGVRRWYCLNISSVPGSVEARARRCSG 97
F+ + +G R +YC + + G R R C G
Sbjct: 319 FFCSKCGQEGHRSFYCPTVREISGRAHFRCRLCGG 353
>06_03_0065 - 16135582-16136001,16136308-16136376
Length = 162
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 189 DSCSDGVRRWYCLNISSVPGSVEARARRCSGGVSAGKR 76
++CS G RW I + EA R GG G+R
Sbjct: 84 ENCSSGKDRWKVFLIHVGGSTGEALGRGAHGGARPGRR 121
>04_04_1032 -
30259180-30260519,30260650-30260720,30261099-30262118,
30263886-30264121
Length = 888
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 144 SSVPGSVEARARRCSGGVSAGKRHHR 67
+S GS ++ R +S GKRHHR
Sbjct: 800 NSKKGSSSSQKVRALSSISIGKRHHR 825
>03_01_0608 + 4471738-4472115
Length = 125
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 189 DSCSDGVRRWYCLNISSVPGSVEARARRC 103
D+C+D R C+N VP + +RC
Sbjct: 85 DACADACARTVCVNQHQVPNWNDVCLKRC 113
>02_04_0253 + 21310082-21310094,21310606-21311135
Length = 180
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = -2
Query: 195 RADSCSDGVRRWYCLNISSVPGSVEARARRCSGGVS 88
R D D R++ + +PG V RRC S
Sbjct: 6 RTDVDEDAARKYVLEKVDELPGEVADMVRRCDAASS 41
>02_04_0249 + 21283004-21283016,21283526-21284055
Length = 180
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = -2
Query: 195 RADSCSDGVRRWYCLNISSVPGSVEARARRCSGGVS 88
R D D R++ + +PG V RRC S
Sbjct: 6 RTDVDEDAARKYVLEKVDELPGEVADMVRRCDAASS 41
>02_04_0247 + 21273978-21273990,21274500-21275029
Length = 180
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = -2
Query: 195 RADSCSDGVRRWYCLNISSVPGSVEARARRCSGGVS 88
R D D R++ + +PG V RRC S
Sbjct: 6 RTDVDEDAARKYVLEKVDELPGEVADMVRRCDAASS 41
>02_04_0245 +
21262645-21262754,21262851-21262997,21263100-21263156,
21263256-21263442,21264700-21264925,21265474-21266003
Length = 418
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = -2
Query: 195 RADSCSDGVRRWYCLNISSVPGSVEARARRCSGGVS 88
R D D R++ + +PG V RRC S
Sbjct: 244 RTDVDEDAARKYVLEKVDELPGEVADMVRRCDAASS 279
>01_05_0597 -
23526705-23526749,23526794-23526905,23527068-23527134,
23527439-23527566,23527638-23527750,23527827-23527972,
23528419-23528525,23528667-23528873,23530878-23531129,
23531324-23531406
Length = 419
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 165 RWYCLNISSVPGSVEARARRCSGGVSAG 82
RW + VP + E R RC+ VS+G
Sbjct: 65 RWEKGSTRRVPAASERRVERCAAAVSSG 92
>11_01_0031 +
248264-248513,248519-249007,249178-249445,249631-249718
Length = 364
Score = 25.4 bits (53), Expect = 6.3
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3
Query: 42 CHLRSSSCIGGGAYQRL 92
C +++CIGGGA+ R+
Sbjct: 216 CAANNATCIGGGAFARI 232
>10_03_0046 + 7357777-7357992
Length = 71
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 189 DSCSDGVRRWYCLNISSVPGSVEARARRCSGGVSAGK 79
D DG+RRW+C S S E + R GG G+
Sbjct: 23 DGGGDGLRRWWCRPASG--RSTERVSGREVGGFGGGE 57
>07_03_0730 + 21030123-21030338
Length = 71
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 189 DSCSDGVRRWYCLNISSVPGSVEARARRCSGGVSAGK 79
D DG+RRW+C S S E + R GG G+
Sbjct: 23 DGGGDGLRRWWCRPASG--RSTERVSGREVGGFGGGE 57
>06_03_0729 +
23927656-23927661,23927774-23927923,23928316-23928567,
23929072-23929209,23931213-23932730
Length = 687
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 83 PALTPPEHRLARASTDPGTLL 145
PAL PPE R+ A D TLL
Sbjct: 430 PALGPPEVRVTGAGADRDTLL 450
>01_06_1064 + 34237919-34238155
Length = 78
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 189 DSCSDGVRRWYCLNISSVPGSVEARARRCSGGVSAGK 79
D DG+RRW+C S S E + R GG G+
Sbjct: 23 DGGGDGLRRWWCRPASG--RSTERVSGREVGGFGGGE 57
>01_05_0006 +
17008799-17009417,17010035-17010162,17010425-17010650,
17010792-17010925,17010988-17011161,17011234-17012238
Length = 761
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 117 VLRLIPARC*CSDSTSALHHHYSCQLGKSWSFH*RGYQRQNTRRQNG 257
++ + P RC S+ + + +C +G S H R+N + NG
Sbjct: 579 LIEMYPDRCGNSEQSPDVPEALTCLMGSSDEIHELETMRRNCKHLNG 625
>04_03_0558 +
17111138-17111996,17112474-17112564,17112647-17113268,
17113378-17113457,17113871-17113937,17114138-17114263,
17114333-17114415,17115334-17115777,17115834-17115927,
17116038-17116124,17116474-17116594,17116671-17116709,
17116828-17116997
Length = 960
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 106 PPSACFD*SRHAADVQTVPAPYTITTAVSSVK 201
P C +R + +P P T+TTA+ ++K
Sbjct: 125 PEQPCTPPARSERQILRLPPPATVTTAIVALK 156
>03_05_0611 + 26113798-26114261,26114451-26114597,26114784-26115405
Length = 410
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = +2
Query: 68 RWW-RLPALTPPEHRLARAST 127
RWW RLP PP + R ST
Sbjct: 118 RWWARLPPRPPPREDMERWST 138
>03_02_0182 -
6216991-6217238,6218076-6218197,6218412-6218497,
6219105-6219218
Length = 189
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 111 RRCSGGVSAGKRHHRCNCYYVSD 43
RR G SAG+RH RC ++D
Sbjct: 56 RRSYWGFSAGERHVRCRPMVLAD 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,391,244
Number of Sequences: 37544
Number of extensions: 160025
Number of successful extensions: 446
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 14,793,348
effective HSP length: 67
effective length of database: 12,277,900
effective search space used: 257835900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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