Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_J17
         (268 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070498-1|AAL47969.1|  471|Drosophila melanogaster GH07816p pro...    27   2.7  
AE014134-3366|AAF53981.2|  471|Drosophila melanogaster CG8678-PA...    27   2.7  
U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type ...    26   6.3  
AE014296-656|AAN11565.1|  717|Drosophila melanogaster CG12010-PB...    26   6.3  
AE014296-655|AAF47769.1|  736|Drosophila melanogaster CG12010-PA...    26   6.3  

>AY070498-1|AAL47969.1|  471|Drosophila melanogaster GH07816p
           protein.
          Length = 471

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -2

Query: 144 SSVPGSVEARARRCSGGVSAGKRHHRCNCYYVSDIIFL*ISGSRLSV 4
           SS+   V A+   C   +   K+   CNC+Y S+I+ + ++  RL V
Sbjct: 55  SSLVVLVTAQKPNCLKMLHFKKKQDICNCFYPSEILCVRMNRQRLIV 101


>AE014134-3366|AAF53981.2|  471|Drosophila melanogaster CG8678-PA
           protein.
          Length = 471

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -2

Query: 144 SSVPGSVEARARRCSGGVSAGKRHHRCNCYYVSDIIFL*ISGSRLSV 4
           SS+   V A+   C   +   K+   CNC+Y S+I+ + ++  RL V
Sbjct: 55  SSLVVLVTAQKPNCLKMLHFKKKQDICNCFYPSEILCVRMNRQRLIV 101


>U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type IV
            alpha 2 protein.
          Length = 1761

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 240  CFAADNHVNGMTSFYRADSCSDGVRRWYCL 151
            C    N     T+  RAD+ S GV RW+CL
Sbjct: 1732 CRRRGNSFVARTAKSRADA-SSGVHRWFCL 1760


>AE014296-656|AAN11565.1|  717|Drosophila melanogaster CG12010-PB,
           isoform B protein.
          Length = 717

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 102 SGGVSAGKRHHRCNCYYVS 46
           SG +S   R H CNC+Y++
Sbjct: 234 SGLLSEFLRRHSCNCFYIT 252


>AE014296-655|AAF47769.1|  736|Drosophila melanogaster CG12010-PA,
           isoform A protein.
          Length = 736

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 102 SGGVSAGKRHHRCNCYYVS 46
           SG +S   R H CNC+Y++
Sbjct: 234 SGLLSEFLRRHSCNCFYIT 252


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,244,477
Number of Sequences: 53049
Number of extensions: 248162
Number of successful extensions: 572
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 24,988,368
effective HSP length: 67
effective length of database: 21,434,085
effective search space used: 450115785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)