Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_J10
         (577 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   7.1  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   9.4  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   9.4  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   9.4  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = -1

Query: 124  VFHNCCSELR*RHISSYLRLPRIQITKQKLGTSSQATGYFD 2
            +F NCC+ +     + Y +L R +  +  LG  +    Y D
Sbjct: 1069 LFTNCCNHISDAIDAIYKQLSRNEAAQAYLGPDNPEEPYLD 1109


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 569 ISWCSPTAINLVLVSANSVIGSICP 495
           +S CSP +       ++S  GS+CP
Sbjct: 235 VSSCSPLSTASSASCSSSAAGSLCP 259


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 370 CNRTCKLHLCLRDKLCGRYCPQ 305
           C R C  HL   +  C R CP+
Sbjct: 261 CVRKCPEHLLKDNGACVRKCPK 282


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 333 SRRQRWSLHVRLHYQE 380
           S R+RWSL  +LH+++
Sbjct: 26  SVRRRWSLCQKLHFRD 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,554
Number of Sequences: 2352
Number of extensions: 12034
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)