Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_J07
(421 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0146 - 953957-956278,956468-956786,957185-957213 32 0.22
03_05_0517 - 25118232-25118730,25119002-25119273 31 0.28
09_02_0511 - 10079180-10079355,10079656-10079722,10080144-100801... 31 0.50
12_02_0216 + 15804110-15804284,15804341-15804351 29 2.0
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257... 29 2.0
02_05_0425 - 28845707-28846189,28846262-28846403,28846496-288469... 28 3.5
11_01_0532 + 4201374-4201401,4201475-4202652,4204316-4204670,420... 27 4.6
08_02_0218 - 14405739-14406096,14406322-14406326 27 6.1
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 27 6.1
07_03_0817 - 21735283-21735358,21735719-21735796,21735885-217359... 27 6.1
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 27 6.1
03_05_0899 - 28619081-28619208,28619309-28619369,28619936-286200... 27 6.1
02_04_0186 + 20754045-20754692,20754772-20755057,20756160-20756668 27 6.1
12_01_1022 - 10435409-10435564,10435950-10436219,10436820-104371... 27 8.1
12_01_0495 - 3935395-3937110 27 8.1
10_08_0654 - 19616426-19616656,19617046-19617249,19617654-196178... 27 8.1
07_03_0380 + 17460078-17460782,17461194-17461252,17461388-174614... 27 8.1
05_02_0114 + 6753868-6754126,6754225-6754592,6754704-6754992,675... 27 8.1
04_03_0961 + 21263735-21263773,21264157-21264279,21266774-212668... 27 8.1
04_03_0742 + 19200045-19200053,19200158-19200437,19201331-192015... 27 8.1
03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591... 27 8.1
03_02_0260 - 6924532-6924757,6925443-6925546,6925729-6926007,692... 27 8.1
01_05_0233 - 19641309-19641871,19650741-19650892,19651193-19651308 27 8.1
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 27 8.1
>05_01_0146 - 953957-956278,956468-956786,957185-957213
Length = 889
Score = 31.9 bits (69), Expect = 0.22
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 210 PSNGPSG-NYEPISTG-PAYVDFNHPNYPPQAIRQPSRPGVGR 332
PS SG N PIS G P+ NH P +I +PS PG R
Sbjct: 6 PSKSRSGPNESPISRGRPSTPSSNHRPSTPSSIHRPSTPGATR 48
>03_05_0517 - 25118232-25118730,25119002-25119273
Length = 256
Score = 31.5 bits (68), Expect = 0.28
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 192 DPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPS 314
D FF++ P GN T P VD P P +A Q S
Sbjct: 37 DWFFTRKGESPQGNISKEETAPTGVDVTDPGRPGRAFTQDS 77
>09_02_0511 -
10079180-10079355,10079656-10079722,10080144-10080181,
10080255-10080336
Length = 120
Score = 30.7 bits (66), Expect = 0.50
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 81 VHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNG 221
V+ V + +PG +++N+G S GN ++ N PFF SNG
Sbjct: 41 VYDVTSYVEEHPGGDEILNNAGATSKGNYALILPVNEFPFFLVYSNG 87
>12_02_0216 + 15804110-15804284,15804341-15804351
Length = 61
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 141 SGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAY 263
SG P+ +H V FF+ SN SGNY + G +
Sbjct: 12 SGSPAPPYKNHTVAGADGWFFNATSNTTSGNYSDWAAGETF 52
>08_02_1277 +
25823835-25825113,25825201-25825418,25825501-25825724,
25826468-25827080,25827735-25827775,25830549-25831191,
25832595-25834012,25834110-25834251,25834415-25834522,
25835346-25835558,25835643-25835753,25836099-25836293,
25836555-25836695,25836835-25836909
Length = 1806
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 195 PFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPSR 317
P + +P+ P EP+ Y+ ++ P+YP + ++P+R
Sbjct: 152 PPYDRPNYPPPSPQEPVRNS-YYMSYDRPSYPAASPQEPTR 191
>02_05_0425 -
28845707-28846189,28846262-28846403,28846496-28846971,
28848817-28848848,28849429-28849572,28849770-28849841,
28850281-28850296
Length = 454
Score = 27.9 bits (59), Expect = 3.5
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +3
Query: 129 VVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQ 308
++D SG SDG + + + + +G ST NH ++ P+ IR
Sbjct: 129 IIDESGFTSDGAGEAYT-------YMRTTTASAGARAAPSTWDLPPKVNHRSFQPRVIRS 181
Query: 309 PSRPGV 326
PS GV
Sbjct: 182 PSASGV 187
>11_01_0532 +
4201374-4201401,4201475-4202652,4204316-4204670,
4204791-4204864,4206965-4207056,4207500-4207573,
4207680-4207822,4207889-4207909
Length = 654
Score = 27.5 bits (58), Expect = 4.6
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +3
Query: 93 DHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGP 257
DH+ D + V+ D+S VP D + D + DP + EP+S P
Sbjct: 40 DHSDDSDSAAVNEDDDSAVPEDAD-DETLAGAEDPVLDLREAEVLPSAEPVSAFP 93
>08_02_0218 - 14405739-14406096,14406322-14406326
Length = 120
Score = 27.1 bits (57), Expect = 6.1
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 138 NSGVP-SDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPS 314
N +P S G D + ++ FS PS+G + P +D H Y + P+
Sbjct: 31 NYALPLSVGAPDLIPLSLTSSLFSLPSHGKWQPHHRSYLPPCQLDRFHQPYNLVGLHMPN 90
Query: 315 RPGVGR 332
+ GVG+
Sbjct: 91 KCGVGK 96
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 27.1 bits (57), Expect = 6.1
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 195 PFFSQPSNGPSGNYEPISTGPAYVDFN--HPNYPPQAIRQPSRPG 323
P +SQPS S ++G D++ PNY P P+ PG
Sbjct: 1788 PSYSQPSPSYSPTSPYTTSGGPSPDYSPTSPNYSPSGSYSPTAPG 1832
>07_03_0817 -
21735283-21735358,21735719-21735796,21735885-21735945,
21736038-21736069,21736144-21736221,21738046-21738213,
21738711-21738897,21740019-21740160
Length = 273
Score = 27.1 bits (57), Expect = 6.1
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = +3
Query: 189 PDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPSRPGVGR*MSHKDXRF 359
P PF S P G Y+PI GP V P + P + RP G +H D F
Sbjct: 216 PVPFGGPGSVPPGGRYDPI--GPPDV----PGFEPSRFVRRPRPPAG--TTHPDLEF 264
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +3
Query: 195 PFFSQPSNGPSGNYEPISTG--PAYVDFNHPNYPPQAIRQPSRPGVGR 332
P+ P P G+Y P+ G P Y + P P ++ P P G+
Sbjct: 418 PYMGAPPPPPPGSYAPVPWGQPPPYASYPPPP-PGSSMYNPPPPAPGQ 464
>03_05_0899 -
28619081-28619208,28619309-28619369,28619936-28620095,
28620200-28620237,28620341-28620394,28620562-28620636,
28620744-28620872,28621172-28621259,28621340-28621446,
28621547-28621595,28621683-28621786,28622019-28622133,
28622517-28622596
Length = 395
Score = 27.1 bits (57), Expect = 6.1
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 210 PSNGPSGNYEPISTGPAYVDFNHPNYPPQAI-RQPSRPG 323
PS P N++ STG A D + PQAI R P R G
Sbjct: 74 PSKLPKWNFDGSSTGQATGDDSEVILHPQAIFRDPFRKG 112
>02_04_0186 + 20754045-20754692,20754772-20755057,20756160-20756668
Length = 480
Score = 27.1 bits (57), Expect = 6.1
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +1
Query: 88 WSIITLIIIQGRFTWWTIVVFHR 156
W+ I + I+ G W+T++V H+
Sbjct: 317 WAAIVMGILSGSIPWYTMMVLHK 339
>12_01_1022 -
10435409-10435564,10435950-10436219,10436820-10437125,
10437932-10438057,10439825-10439893,10440443-10440487,
10440717-10440776,10441527-10441589,10442186-10442266,
10442494-10442916
Length = 532
Score = 26.6 bits (56), Expect = 8.1
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +3
Query: 162 NSDHVVIANPDPFFSQPSNGPSGNYEPIS-TGPAYVDFNHPNYPP 293
N HV P P +S P G Y P G V N P YPP
Sbjct: 357 NEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLN-PYYPP 400
>12_01_0495 - 3935395-3937110
Length = 571
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +3
Query: 93 DHNPDYNPGQVHVVDNSGVPSDGNSD--HVVIANPDP 197
DH Y+ HVVD P G D HV +A P P
Sbjct: 342 DHYLGYHSHDAHVVDAEATPEQGYHDDAHVAVA-PAP 377
>10_08_0654 -
19616426-19616656,19617046-19617249,19617654-19617824,
19619617-19620411
Length = 466
Score = 26.6 bits (56), Expect = 8.1
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 177 VIANPDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPSRPGV 326
+ ANP S P PS P++ A + H PPQ +Q +PG+
Sbjct: 42 ITANP----SSPDPAPSAPLPPLAPREADLVAPHLPPPPQQQQQQQQPGI 87
>07_03_0380 +
17460078-17460782,17461194-17461252,17461388-17461492,
17461732-17461867,17461919-17461939
Length = 341
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 84 HVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIA 185
H+V+ P + G+ V + VP DG +H+V++
Sbjct: 282 HIVERKP-FRCGRYPPVVRTAVPVDGRFEHIVLS 314
>05_02_0114 +
6753868-6754126,6754225-6754592,6754704-6754992,
6755838-6755909,6757440-6757666
Length = 404
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 213 SNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPS-RPGVGR 332
S +GN+ S G + FNH Y R+P+ RP GR
Sbjct: 40 SYSDTGNFVLQSAGLPSIPFNHSPYGDTFFRRPTGRPSDGR 80
>04_03_0961 +
21263735-21263773,21264157-21264279,21266774-21266847,
21266939-21267095,21267554-21267694,21267739-21267823,
21268810-21268903,21269041-21269239,21269515-21269549,
21270076-21270631,21270722-21270882,21271704-21271718,
21273078-21273330,21273439-21273562,21273688-21273788,
21274870-21274938,21275060-21275191,21275270-21275404,
21275489-21275551,21275636-21275881,21276007-21276285
Length = 1026
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/54 (20%), Positives = 24/54 (44%)
Frame = +3
Query: 87 VVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPIS 248
++ P+ G + + N+G+P +S N +P + + N EP++
Sbjct: 340 LIKDEPNTQDGNNNTIQNTGIPIIASSSEFTPMNVEPSIASSNEFTPMNVEPLN 393
>04_03_0742 +
19200045-19200053,19200158-19200437,19201331-19201545,
19201705-19201792,19202277-19202842
Length = 385
Score = 26.6 bits (56), Expect = 8.1
Identities = 19/62 (30%), Positives = 22/62 (35%)
Frame = +3
Query: 135 DNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPS 314
D D D IA + + P Y P G AY P+YPP QPS
Sbjct: 301 DGEEKDKDKEKDPAAIAAANLYLHYPRFAFPAGYYPPGPGYAYPPPYPPSYPPP--YQPS 358
Query: 315 RP 320
P
Sbjct: 359 YP 360
>03_06_0327 -
33158131-33158315,33158586-33158639,33159149-33159180,
33159275-33159369,33159466-33159539,33159643-33159778,
33159874-33159937,33160017-33160079,33160160-33160299,
33160487-33160627,33160747-33160868,33160947-33161112,
33161194-33161313,33161580-33161651,33161787-33161843,
33162036-33162152,33162231-33162369,33162794-33162900,
33162972-33163081,33163172-33163305,33163397-33163546,
33163635-33163840,33166123-33166818
Length = 1059
Score = 26.6 bits (56), Expect = 8.1
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +3
Query: 96 HNPDYNPGQVHVVDNSGVPSDG---NSDHVVIANPDPFFSQPSNGPSGNYEPISTGPA 260
H Y PG V+ + GVP G S V I P P S+ P+ Y+P + PA
Sbjct: 83 HQGAYQPGGVYRAPSPGVPVIGGYARSTPVTIRAPPP---SHSSAPA-PYQPAAAAPA 136
>03_02_0260 -
6924532-6924757,6925443-6925546,6925729-6926007,
6926093-6926368,6926460-6926678,6926758-6926926,
6927208-6927382,6927489-6927600,6929566-6929820
Length = 604
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 129 VVDNSGVPSDGNSDHVVIANPDPFFSQP 212
V++N +P N HVV+ANP P P
Sbjct: 248 VLENCQLPH-ANHGHVVLANPSPILFYP 274
>01_05_0233 - 19641309-19641871,19650741-19650892,19651193-19651308
Length = 276
Score = 26.6 bits (56), Expect = 8.1
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +3
Query: 117 GQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGP---SGNYE-PISTGPAYVDFNHPN 284
G ++ VD+ + + + +I P P SQP P SG + P +TG H
Sbjct: 40 GDLYEVDSEDMNHEKFWNGSIIELPQPSLSQPKGAPWSKSGEEKIPSATGAVPGYLQHLR 99
Query: 285 YPPQAIR 305
P A+R
Sbjct: 100 VSPDAVR 106
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 26.6 bits (56), Expect = 8.1
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 141 SGVPSD-GNSDHVVIANPDPFF-SQPSNGPSGNYEPIST 251
SG PS GN+ + ++P PF S PS+G SGNY + T
Sbjct: 464 SGSPSHRGNAG--MKSSPSPFAPSGPSSGGSGNYGRLPT 500
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,203,048
Number of Sequences: 37544
Number of extensions: 271691
Number of successful extensions: 720
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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