Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_J07
         (421 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104445-1|AAI04446.1|  197|Homo sapiens transmembrane protein 5...    32   0.68 
AY358589-1|AAQ88952.1|  197|Homo sapiens PPAG583 protein.              32   0.68 
BC111855-1|AAI11856.1|  197|Homo sapiens transmembrane protein 5...    32   0.90 
BC104444-1|AAI04445.1|  197|Homo sapiens transmembrane protein 5...    32   0.90 
BC061908-1|AAH61908.1|  176|Homo sapiens TMEM58 protein protein.       32   0.90 
BC009558-1|AAH09558.1|  228|Homo sapiens TMEM58 protein protein.       32   0.90 
AL513217-1|CAH72277.1|  197|Homo sapiens transmembrane protein 5...    32   0.90 
Y13620-1|CAA73942.1| 1394|Homo sapiens B-cell CLL/lymphoma 9 pro...    30   3.6  
BC116451-1|AAI16452.1| 1426|Homo sapiens B-cell CLL/lymphoma 9 p...    30   3.6  
AL359207-1|CAI15198.1| 1426|Homo sapiens B-cell CLL/lymphoma 9 p...    30   3.6  
Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.        29   8.4  
U82130-1|AAC52083.1|  390|Homo sapiens tumor susceptibility prot...    29   8.4  
BC002487-1|AAH02487.1|  390|Homo sapiens tumor susceptibility ge...    29   8.4  
AK056597-1|BAB71229.1|  644|Homo sapiens protein ( Homo sapiens ...    29   8.4  
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi...    29   8.4  
AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein.             29   8.4  

>BC104445-1|AAI04446.1|  197|Homo sapiens transmembrane protein 58
           protein.
          Length = 197

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +3

Query: 183 ANPDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPSRPG 323
           A P P F  P +GP+  Y     GP    +N    PP    QPS PG
Sbjct: 152 APPQPGFMYPPSGPAPQYPLYPAGPPV--YNPAAPPPYMPPQPSYPG 196


>AY358589-1|AAQ88952.1|  197|Homo sapiens PPAG583 protein.
          Length = 197

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +3

Query: 183 ANPDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPSRPG 323
           A P P F  P +GP+  Y     GP    +N    PP    QPS PG
Sbjct: 152 APPQPGFMYPPSGPAPQYPLYPAGPPV--YNPAAPPPYMPPQPSYPG 196


>BC111855-1|AAI11856.1|  197|Homo sapiens transmembrane protein 58
           protein.
          Length = 197

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +3

Query: 183 ANPDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPSRPG 323
           A P P F  P +GP+  Y     GP    +N    PP    QPS PG
Sbjct: 152 APPQPGFIYPPSGPAPQYPLYPAGPPV--YNPAAPPPYMPPQPSYPG 196


>BC104444-1|AAI04445.1|  197|Homo sapiens transmembrane protein 58
           protein.
          Length = 197

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +3

Query: 183 ANPDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPSRPG 323
           A P P F  P +GP+  Y     GP    +N    PP    QPS PG
Sbjct: 152 APPQPGFIYPPSGPAPQYPLYPAGPPV--YNPAAPPPYMPPQPSYPG 196


>BC061908-1|AAH61908.1|  176|Homo sapiens TMEM58 protein protein.
          Length = 176

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +3

Query: 183 ANPDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPSRPG 323
           A P P F  P +GP+  Y     GP    +N    PP    QPS PG
Sbjct: 131 APPQPGFIYPPSGPAPQYPLYPAGPPV--YNPAAPPPYMPPQPSYPG 175


>BC009558-1|AAH09558.1|  228|Homo sapiens TMEM58 protein protein.
          Length = 228

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +3

Query: 183 ANPDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPSRPG 323
           A P P F  P +GP+  Y     GP    +N    PP    QPS PG
Sbjct: 183 APPQPGFIYPPSGPAPQYPLYPAGPPV--YNPAAPPPYMPPQPSYPG 227


>AL513217-1|CAH72277.1|  197|Homo sapiens transmembrane protein 58
           protein.
          Length = 197

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +3

Query: 183 ANPDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPSRPG 323
           A P P F  P +GP+  Y     GP    +N    PP    QPS PG
Sbjct: 152 APPQPGFIYPPSGPAPQYPLYPAGPPV--YNPAAPPPYMPPQPSYPG 196


>Y13620-1|CAA73942.1| 1394|Homo sapiens B-cell CLL/lymphoma 9 protein.
          Length = 1394

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = +3

Query: 141  SGVPSDG-NSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAYVDFN--HPNYPPQAIRQP 311
            + +P  G N+ +  I+ P+P    P+  P G  +P+S        N   PN PP  +  P
Sbjct: 1051 NNMPGMGINTQNPRISGPNPVVPMPTLSPMGMTQPLSHSNQMPSPNAVGPNIPPHGV--P 1108

Query: 312  SRPGVGR*MSH 344
              PG+   MSH
Sbjct: 1109 MGPGL---MSH 1116


>BC116451-1|AAI16452.1| 1426|Homo sapiens B-cell CLL/lymphoma 9
            protein.
          Length = 1426

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = +3

Query: 141  SGVPSDG-NSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAYVDFN--HPNYPPQAIRQP 311
            + +P  G N+ +  I+ P+P    P+  P G  +P+S        N   PN PP  +  P
Sbjct: 1051 NNMPGMGINTQNPRISGPNPVVPMPTLSPMGMTQPLSHSNQMPSPNAVGPNIPPHGV--P 1108

Query: 312  SRPGVGR*MSH 344
              PG+   MSH
Sbjct: 1109 MGPGL---MSH 1116


>AL359207-1|CAI15198.1| 1426|Homo sapiens B-cell CLL/lymphoma 9
            protein.
          Length = 1426

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = +3

Query: 141  SGVPSDG-NSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAYVDFN--HPNYPPQAIRQP 311
            + +P  G N+ +  I+ P+P    P+  P G  +P+S        N   PN PP  +  P
Sbjct: 1051 NNMPGMGINTQNPRISGPNPVVPMPTLSPMGMTQPLSHSNQMPSPNAVGPNIPPHGV--P 1108

Query: 312  SRPGVGR*MSH 344
              PG+   MSH
Sbjct: 1109 MGPGL---MSH 1116


>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
          Length = 3851

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +3

Query: 189  PDPFFSQPSNGPSGNYEPISTGPAY---VDFNHPNYPPQAIRQPSRPGV 326
            P P +S  S GP+ N  P    P Y     +  P +PP A   P+ PG+
Sbjct: 2984 PAPQYSAGSGGPTQNGFPAHQAPTYPGPSTYPAPAFPPGA-SYPAEPGL 3031


>U82130-1|AAC52083.1|  390|Homo sapiens tumor susceptibility protein
           protein.
          Length = 390

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 15/45 (33%), Positives = 18/45 (40%)
 Frame = +3

Query: 189 PDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPSRPG 323
           P  +   PS  P   Y P    PA     +P+ PP     PSR G
Sbjct: 175 PSGYPPNPSGYPGCPYPPGGPYPATTSSQYPSQPPVTTVGPSRDG 219


>BC002487-1|AAH02487.1|  390|Homo sapiens tumor susceptibility gene
           101 protein.
          Length = 390

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 15/45 (33%), Positives = 18/45 (40%)
 Frame = +3

Query: 189 PDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPSRPG 323
           P  +   PS  P   Y P    PA     +P+ PP     PSR G
Sbjct: 175 PSGYPPNPSGYPGCPYPPGGPYPATTSSQYPSQPPVTTVGPSRDG 219


>AK056597-1|BAB71229.1|  644|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32035 fis, clone NTONG2000363. ).
          Length = 644

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 20/81 (24%), Positives = 31/81 (38%)
 Frame = +3

Query: 81  VHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPA 260
           V V  HNP +        ++    +D +      A+ +    QP  GP     P+   P+
Sbjct: 396 VPVYPHNPWFQEAPAAQNESDCTCTDAHFPMQTEASVNGQMPQPEIGPPTFSSPLVIPPS 455

Query: 261 YVDFNHPNYPPQAIRQPSRPG 323
            V  +H   P QA  +   PG
Sbjct: 456 QVSESHGQLPYQADLESETPG 476


>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc finger
            protein protein.
          Length = 3926

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +3

Query: 189  PDPFFSQPSNGPSGNYEPISTGPAY---VDFNHPNYPPQAIRQPSRPGV 326
            P P +S  S GP+ N  P    P Y     +  P +PP A   P+ PG+
Sbjct: 3059 PAPQYSAGSGGPTQNGFPAHQAPTYPGPSTYPAPAFPPGA-SYPAEPGL 3106


>AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein.
          Length = 1571

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +3

Query: 189 PDPFFSQPSNGPSGNYEPISTGPAY---VDFNHPNYPPQAIRQPSRPGV 326
           P P +S  S GP+ N  P    P Y     +  P +PP A   P+ PG+
Sbjct: 704 PAPQYSAGSGGPTQNGFPAHQAPTYPGPSTYPAPAFPPGA-SYPAEPGL 751


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,505,360
Number of Sequences: 237096
Number of extensions: 1515413
Number of successful extensions: 3442
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3441
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)