Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_J07
(421 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70307-11|CAA94337.1| 488|Caenorhabditis elegans Hypothetical p... 31 0.33
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.44
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 29 1.0
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 1.0
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 29 1.0
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 29 1.0
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 29 1.4
Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical pr... 28 2.4
U42848-3|AAA83609.1| 693|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical pr... 27 4.1
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 27 5.5
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 27 7.2
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 27 7.2
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 27 7.2
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 27 7.2
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 27 7.2
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 27 7.2
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 26 9.5
AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical ... 26 9.5
>Z70307-11|CAA94337.1| 488|Caenorhabditis elegans Hypothetical
protein C39E9.10 protein.
Length = 488
Score = 31.1 bits (67), Expect = 0.33
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +1
Query: 82 CTWSIITLIIIQGRFTWW-TIVVFHRTA 162
CTW L+ + G +WW V+ H TA
Sbjct: 229 CTWGYTALVFVSGTLSWWEPTVIQHLTA 256
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 30.7 bits (66), Expect = 0.44
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 138 NSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNY-EPISTGPAYVDFNHPNYPPQAIRQPS 314
+SG PS + A+P P + PS PS +Y P P+Y ++P P ++ P+
Sbjct: 349 DSGYPSPAPQEP---AHPSPSYPSPSY-PSPSYPSPSYPSPSYPSPSYPAEPAYSVPPPA 404
Query: 315 RP 320
+P
Sbjct: 405 KP 406
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 29.5 bits (63), Expect = 1.0
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +3
Query: 81 VHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPF-FSQPSNGPSGN--YEPIST 251
V +D+ P VH + + GNS + +P+P +P++ P+ + P
Sbjct: 452 VRELDYRPYEKENGVHTPNAETNSTQGNSSPISTISPEPVTIVKPASTPATDSVSTPSVV 511
Query: 252 GPAYVDFNHPNYPPQAIRQP 311
GPA+ P PP R+P
Sbjct: 512 GPAF-GKKVPEQPPVNFRKP 530
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 1.0
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +3
Query: 180 IANPDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPSR 317
+A P P PS P+ + PISTGP+Y P P A PSR
Sbjct: 439 VAPPPP----PSAPPTIKF-PISTGPSYSSTTPPTTPKPAPPPPSR 479
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 29.5 bits (63), Expect = 1.0
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +3
Query: 81 VHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPF-FSQPSNGPSGN--YEPIST 251
V +D+ P VH + + GNS + +P+P +P++ P+ + P
Sbjct: 452 VRELDYRPYEKENGVHTPNAETNSTQGNSSPISTISPEPVTIVKPASTPATDSVSTPSVV 511
Query: 252 GPAYVDFNHPNYPPQAIRQP 311
GPA+ P PP R+P
Sbjct: 512 GPAF-GKKVPEQPPVNFRKP 530
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 29.5 bits (63), Expect = 1.0
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +3
Query: 81 VHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPF-FSQPSNGPSGN--YEPIST 251
V +D+ P VH + + GNS + +P+P +P++ P+ + P
Sbjct: 452 VRELDYRPYEKENGVHTPNAETNSTQGNSSPISTISPEPVTIVKPASTPATDSVSTPSVV 511
Query: 252 GPAYVDFNHPNYPPQAIRQP 311
GPA+ P PP R+P
Sbjct: 512 GPAF-GKKVPEQPPVNFRKP 530
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 29.1 bits (62), Expect = 1.4
Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
Frame = +3
Query: 84 HVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAY 263
H+ P ++P Q H G+P+ + ++ P P P G P G
Sbjct: 93 HLQQQQPQHSPQQGHPHPQQGLPAAHHRQQMMPPQAAPSPGGPMQPPHGFAPPPMGGGVP 152
Query: 264 VD-FNHPNYPPQAIRQPSRP 320
+ NH Y Q +Q +P
Sbjct: 153 PEMMNHQAYQAQMRQQQQQP 172
>Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical
protein T06E4.8 protein.
Length = 199
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 177 VIANPDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAI 302
V A P P F+ P+ P PI GPA+ P P +
Sbjct: 110 VFAAPRPVFASPALAPVAPMAPILRGPAFAYAPSPVLAPVGV 151
>U42848-3|AAA83609.1| 693|Caenorhabditis elegans Hypothetical
protein C31H1.1 protein.
Length = 693
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 143 TIVHHVNLPWIIIRVMIDHVHSVCGSHGQYGEEEKRESFHCRIV 12
T+VH +LP+ I+R M DH + G + +++ H I+
Sbjct: 54 TVVHQKSLPFEILRTMTDHFN--YGPRLNFNHLHQQQQLHSTII 95
>Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical
protein T06E4.9 protein.
Length = 212
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +3
Query: 177 VIANPDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAI 302
V A P P F+ P+ P P+ GPA+ P P +
Sbjct: 123 VFAAPRPVFAAPALAPVAPMAPVLRGPAFAYAPSPVLAPVGV 164
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 135 DNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPA 260
D SG P G DP +QPS GP G + P P+
Sbjct: 291 DPSGAPPSGGPPGPF----DPSGAQPSGGPPGPFNPSGAPPS 328
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -2
Query: 198 KDPGSQ*QRGHYCRPMEHHYCPPREPALDYNQGYDRPRALC 76
+ P S QRG C P PPR P D + P C
Sbjct: 1908 RSPDSS-QRGRVCEPPPPPSPPPRHPCQDPERNDCHPAGTC 1947
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -2
Query: 198 KDPGSQ*QRGHYCRPMEHHYCPPREPALDYNQGYDRPRALC 76
+ P S QRG C P PPR P D + P C
Sbjct: 2492 RSPDSS-QRGRVCEPPPPPSPPPRHPCQDPERNDCHPAGTC 2531
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -2
Query: 198 KDPGSQ*QRGHYCRPMEHHYCPPREPALDYNQGYDRPRALC 76
+ P S QRG C P PPR P D + P C
Sbjct: 1908 RSPDSS-QRGRVCEPPPPPSPPPRHPCQDPERNDCHPAGTC 1947
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -2
Query: 198 KDPGSQ*QRGHYCRPMEHHYCPPREPALDYNQGYDRPRALC 76
+ P S QRG C P PPR P D + P C
Sbjct: 2492 RSPDSS-QRGRVCEPPPPPSPPPRHPCQDPERNDCHPAGTC 2531
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 186 NPDPFFSQPS-NGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPSRPG 323
NP P PS NGPS +P GP+ N PN P P++PG
Sbjct: 939 NPGPGPGPPSPNGPSDPNKPSPNGPSP---NGPNGP----SDPNKPG 978
Score = 26.2 bits (55), Expect = 9.5
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = +3
Query: 102 PDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAYVDF-NH 278
P NPG + PSD N P P P NGP+G +P GP+ + +
Sbjct: 936 PKPNPGPGPGPPSPNGPSDPNK-------PSPNGPSP-NGPNGPSDPNKPGPSGPNGPSD 987
Query: 279 PNYP-PQAIRQPSRP 320
PN P P P +P
Sbjct: 988 PNKPSPNGPSDPVKP 1002
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -2
Query: 198 KDPGSQ*QRGHYCRPMEHHYCPPREPALDYNQGYDRPRALC 76
+ P S QRG C P PPR P D + P C
Sbjct: 2492 RSPDSS-QRGRVCEPPPPPSPPPRHPCQDPERNDCHPAGTC 2531
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 189 PDPFFSQPSNGPSGNYEPIS 248
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 189 PDPFFSQPSNGPSGNYEPIS 248
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 26.2 bits (55), Expect = 9.5
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 180 IANPDPFFSQPSNGPSGNYEPISTGPAYVDFNHPNYPPQAIRQPSR 317
+A P P PS P+ + PISTG +Y P P A PSR
Sbjct: 432 VAPPPP----PSAPPTIKF-PISTGTSYSSTTPPTTPKPAPPPPSR 472
>AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.4a protein.
Length = 527
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 159 GNSDHVVIANPDPFFSQPSNGPSG 230
GN D VI N DPF S G G
Sbjct: 476 GNDDIPVIPNGDPFSGSSSGGSGG 499
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,056,549
Number of Sequences: 27780
Number of extensions: 228694
Number of successful extensions: 623
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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