Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_J03
(601 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearl... 34 0.083
At5g43990.2 68418.m05382 SET domain-containing protein identical... 31 0.58
At5g43990.1 68418.m05383 SET domain-containing protein identical... 31 0.58
At3g54790.1 68416.m06063 armadillo/beta-catenin repeat family pr... 31 0.77
At5g16910.1 68418.m01982 cellulose synthase family protein simil... 29 1.8
At4g28570.1 68417.m04087 alcohol oxidase-related low similarity ... 29 1.8
At5g51180.2 68418.m06346 expressed protein 29 2.4
At5g51180.1 68418.m06345 expressed protein 29 2.4
At2g23200.1 68415.m02771 protein kinase family protein contains ... 28 4.1
At3g57030.1 68416.m06348 strictosidine synthase family protein s... 28 5.4
At5g40480.1 68418.m04909 expressed protein ; expression supporte... 27 7.2
At4g21270.1 68417.m03074 kinesin-like protein A (KATA) 27 7.2
At4g11130.1 68417.m01805 RNA-dependent RNA polymerase, putative ... 27 7.2
At1g68100.1 68414.m07779 IAA-alanine resistance protein 1, putat... 27 7.2
At5g64360.3 68418.m08085 DNAJ heat shock N-terminal domain-conta... 27 9.5
At5g64360.2 68418.m08084 DNAJ heat shock N-terminal domain-conta... 27 9.5
At5g64360.1 68418.m08083 DNAJ heat shock N-terminal domain-conta... 27 9.5
At5g52140.1 68418.m06472 zinc finger protein-related 27 9.5
At3g46660.1 68416.m05065 UDP-glucoronosyl/UDP-glucosyl transfera... 27 9.5
At2g20810.1 68415.m02448 glycosyl transferase family 8 protein c... 27 9.5
>At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearly
identical to ubiquitin-protein ligase 1 [Arabidopsis
thaliana] GI:7108521; E3, HECT-domain protein family;
similar to GI:7108521, GB:AAF36454 from [Arabidopsis
thaliana]
Length = 3891
Score = 33.9 bits (74), Expect = 0.083
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +1
Query: 61 ASTAGTCSLKSLATTSNSMMISRSSGATPGCAGKRVLS-LSTLTVP 195
AS+ + +++ LAT S+ +SRS+G+ G + RVL LS+LT P
Sbjct: 3290 ASSLSSSTVRELATLSSKQKMSRSTGSMAGASILRVLQVLSSLTSP 3335
>At5g43990.2 68418.m05382 SET domain-containing protein identical to
SET domain protein SUVR2 [Arabidopsis thaliana]
GI:15290521; contains Pfam profiles PF00856: SET domain,
PF05033: Pre-SET motif; identical to cDNA SET domain
protein SUVR2 GI:15290520
Length = 740
Score = 31.1 bits (67), Expect = 0.58
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 141 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAGLAYDN 320
N V +AG +DGT+ I + +HKL+A +++ ++L ++ +G N
Sbjct: 220 NGHVEEKAGETVSTADGTTNDISPTTVARFSDHKLAA--TIEEPPALELASSASGEVKIN 277
Query: 321 VNGHGAT-LTNTHIP 362
++ AT +N H+P
Sbjct: 278 LSFAPATGGSNPHLP 292
>At5g43990.1 68418.m05383 SET domain-containing protein identical to
SET domain protein SUVR2 [Arabidopsis thaliana]
GI:15290521; contains Pfam profiles PF00856: SET domain,
PF05033: Pre-SET motif; identical to cDNA SET domain
protein SUVR2 GI:15290520
Length = 717
Score = 31.1 bits (67), Expect = 0.58
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 141 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAGLAYDN 320
N V +AG +DGT+ I + +HKL+A +++ ++L ++ +G N
Sbjct: 197 NGHVEEKAGETVSTADGTTNDISPTTVARFSDHKLAA--TIEEPPALELASSASGEVKIN 254
Query: 321 VNGHGAT-LTNTHIP 362
++ AT +N H+P
Sbjct: 255 LSFAPATGGSNPHLP 269
>At3g54790.1 68416.m06063 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 760
Score = 30.7 bits (66), Expect = 0.77
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = -3
Query: 503 SATNSVEIGNLRNAGHVLSSESLCAEVMVIIVEQVDFASGGQLVTETRDVSVCKSRSVSI 324
++ +S+E GN + S SLC E +E + S GQ T +R SVC S S+
Sbjct: 353 TSRSSLETGNGFEKLKINVSASLCGESQSKDLEIFELLSPGQSYTHSRSESVCSVVS-SV 411
Query: 323 DIV 315
D V
Sbjct: 412 DYV 414
>At5g16910.1 68418.m01982 cellulose synthase family protein similar
to gi:2827143 cellulose synthase catalytic subunit,
Arabidopsis thaliana, gi:9622886 cellulose synthase-7
from Zea mays
Length = 1145
Score = 29.5 bits (63), Expect = 1.8
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = -1
Query: 460 GMFLVAKAFALRSWLSLWNRLTLPAAVSLSPKPGM*VFVRVAPCPLTLSYANPAVAAPNF 281
GM + A+ R W L +L +PA V +SP + +F+R+ L L++ P+
Sbjct: 266 GMGMEAQDLMSRPWRPLTRKLKIPAGV-ISPY-RLLIFIRIVVLALFLTW-RVKHQNPDA 322
Query: 280 IWLVRSTEPRALSLWFSL 227
+WL + LWF+L
Sbjct: 323 VWLWGMSV--VCELWFAL 338
>At4g28570.1 68417.m04087 alcohol oxidase-related low similarity to
long chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]
Length = 748
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 509 VQSATNSVEIGNLRNAGHVLSSESLCAEVMVIIVEQVDFASG 384
V A +VE+G R+ G + E++ E M +++VD G
Sbjct: 623 VSVAAGAVEVGTYRSDGQKMKCEAITKEAMEEFLDEVDAVGG 664
>At5g51180.2 68418.m06346 expressed protein
Length = 357
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -3
Query: 350 VCKSRSV--SIDIVVCQSSCSGSQLHLVSEING 258
+CK+ SV S+D+ CQ+S S S HLV ++G
Sbjct: 10 LCKAESVDGSLDVWSCQNSDSSSADHLVVMVHG 42
>At5g51180.1 68418.m06345 expressed protein
Length = 357
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -3
Query: 350 VCKSRSV--SIDIVVCQSSCSGSQLHLVSEING 258
+CK+ SV S+D+ CQ+S S S HLV ++G
Sbjct: 10 LCKAESVDGSLDVWSCQNSDSSSADHLVVMVHG 42
>At2g23200.1 68415.m02771 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 834
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +3
Query: 315 DNVNGHGATLTNTHIPGFGDKLTAAGKVNLFHNDNHDLSAKAFATKNMPSIPQVPDFNTV 494
D++ H L + + D LTA V+ NH L K+F+ +N+ + P+V +F +
Sbjct: 105 DSLGLHFVRLHFSVVFSRADLLTARFTVSATSGSNHHL--KSFSPQNLTNTPRVEEFLLM 162
Query: 495 GGGLDY 512
L++
Sbjct: 163 MNSLEF 168
>At3g57030.1 68416.m06348 strictosidine synthase family protein
similar to strictosidine synthase [Rauvolfia
serpentina][SP|P15324]
Length = 374
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 319 LSYANPAVAAPN--FIWLVRSTEPRALSLWFSLPVIGTLTIAPEVP 188
L++AN + + F+ +V +T + L LW S P GT + E+P
Sbjct: 218 LAFANGVALSKDRSFVLVVETTTCKILRLWLSGPNAGTHQVFAELP 263
>At5g40480.1 68418.m04909 expressed protein ; expression supported by
MPSS
Length = 1919
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 321 VNGHGATLTNTHIPGFGDKLTAAGKVNLFHNDNH 422
V+ G TLTN H+P G K + N F H
Sbjct: 1610 VDSPGETLTNVHVPAEGYKFPVKFRENKFAVTEH 1643
>At4g21270.1 68417.m03074 kinesin-like protein A (KATA)
Length = 793
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 380 QLVTETRDVSVCKSRSVSIDIVVCQSSCSGSQLHLVSEING-AKSTELVVF 231
++ ET + +R+ S+D+V S SG Q + ++NG ++L +F
Sbjct: 568 EIYNETIRDLLSTNRTTSMDLVRADSGTSGKQYTITHDVNGHTHVSDLTIF 618
>At4g11130.1 68417.m01805 RNA-dependent RNA polymerase, putative
similar to RNA-directed RNA polymerase [Lycopersicon
esculentum] gi|4038592|emb|CAA71421
Length = 1133
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 465 IPQVPDFNTVGGGLDYMFKDKIGASATA 548
+ Q+PD G DY F D IG + A
Sbjct: 536 VEQIPDIEVTTDGADYCFSDGIGKISLA 563
>At1g68100.1 68414.m07779 IAA-alanine resistance protein 1, putative
similar to IAA-alanine resistance protein 1 [Arabidopsis
thaliana] SWISS-PROT:Q9M647; contains ZIP Zinc
transporter domain, Pfam:PF02535; identical to cDNA
IAA-alanine resistance protein 1 mRNA GI:6942042
Length = 469
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +3
Query: 3 SSKHSKMFTKLFLVSVLLVGVNSRYVLVEEPGYYIEQYDDQPEQWGNSRVRRQAGALTIN 182
S HS L + +L G+ ++LVE+ Y+E+ WG+ AG+ +
Sbjct: 191 SPSHSHSIQDLSVGLSVLAGIVV-FLLVEKLVRYVEENSSGSNTWGHHHHHHHAGSKKLK 249
Query: 183 SDG 191
+G
Sbjct: 250 DEG 252
>At5g64360.3 68418.m08085 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226 DnaJ domain
Length = 464
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -1
Query: 265 STEPRALSLWFSLPVIGTLTIAPEVPSELIVRAPACRRTLE 143
S +P A S W + P L P+ E ++ CRR +
Sbjct: 187 SADPMATSFWTACPYCFVLFEYPKAYEECTLKCQECRRAFQ 227
>At5g64360.2 68418.m08084 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226 DnaJ domain
Length = 464
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -1
Query: 265 STEPRALSLWFSLPVIGTLTIAPEVPSELIVRAPACRRTLE 143
S +P A S W + P L P+ E ++ CRR +
Sbjct: 187 SADPMATSFWTACPYCFVLFEYPKAYEECTLKCQECRRAFQ 227
>At5g64360.1 68418.m08083 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226 DnaJ domain
Length = 422
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -1
Query: 265 STEPRALSLWFSLPVIGTLTIAPEVPSELIVRAPACRRTLE 143
S +P A S W + P L P+ E ++ CRR +
Sbjct: 187 SADPMATSFWTACPYCFVLFEYPKAYEECTLKCQECRRAFQ 227
>At5g52140.1 68418.m06472 zinc finger protein-related
Length = 277
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/40 (25%), Positives = 24/40 (60%)
Frame = -3
Query: 398 DFASGGQLVTETRDVSVCKSRSVSIDIVVCQSSCSGSQLH 279
D+A G ++ + ++ S+C +++++I + +C S LH
Sbjct: 29 DYAIGREIQQQYQNKSICNDAAIALEIQKEEEACVHSCLH 68
>At3g46660.1 68416.m05065 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 458
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 473 SSRFQHCWWRIGLHVQGQ-DWCISDRRTHRL 562
++R+ C W+IG+ V+G+ D + +R RL
Sbjct: 384 NARYLECVWKIGIQVEGELDRGVVERAVKRL 414
>At2g20810.1 68415.m02448 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 536
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 323 DIVVCQSSCSGSQLHLVSEINGAKSTELVVFVASYRYLDYS 201
D+VV + S + L +NGA T + F ++YL+YS
Sbjct: 365 DVVVQKDLSSLFSIDLNKNVNGAVETCMETFHRYHKYLNYS 405
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,000,068
Number of Sequences: 28952
Number of extensions: 299918
Number of successful extensions: 873
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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