Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_J01
(587 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16631| Best HMM Match : BCNT (HMM E-Value=2.3) 45 4e-05
SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_55969| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099) 37 0.011
SB_45362| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05) 36 0.032
SB_23827| Best HMM Match : DUF809 (HMM E-Value=9.1) 35 0.043
SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 32 0.30
SB_38138| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_25003| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2) 31 0.53
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 0.70
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31) 31 0.70
SB_26644| Best HMM Match : Collagen (HMM E-Value=0) 30 1.2
SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024) 30 1.2
SB_45304| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_29755| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07) 29 2.1
SB_30949| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8) 29 2.8
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 29 2.8
SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10) 29 3.7
SB_51325| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_8542| Best HMM Match : PT (HMM E-Value=4) 28 4.9
SB_24257| Best HMM Match : DUF583 (HMM E-Value=0.16) 28 4.9
SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 27 8.6
SB_50003| Best HMM Match : PAN (HMM E-Value=0.044) 27 8.6
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 27 8.6
SB_6496| Best HMM Match : Collagen (HMM E-Value=0) 27 8.6
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 27 8.6
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_16631| Best HMM Match : BCNT (HMM E-Value=2.3)
Length = 197
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/89 (33%), Positives = 46/89 (51%)
Frame = -3
Query: 273 VDSHDYFPTFPQCLDIHGFLLKTGVH*FLQVYFHCRLQIIHQTMGIRDYLLTMDIRGYHP 94
VD DY + +DI +L K + L+ ++ + + IRDYL +DIR Y
Sbjct: 72 VDIRDYL----EKVDIRDYLEKVDIRDHLE---KVDIRDYLEKVDIRDYLEKVDIRDYLE 124
Query: 93 TMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ IRDY + IRDY + + IRDY + +
Sbjct: 125 KVDIRDYLEEVDIRDYLEKVDIRDYLEKV 153
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/89 (33%), Positives = 46/89 (51%)
Frame = -3
Query: 273 VDSHDYFPTFPQCLDIHGFLLKTGVH*FLQVYFHCRLQIIHQTMGIRDYLLTMDIRGYHP 94
VD DY + +DI L K + +L+ ++ + + IRDYL +DIR Y
Sbjct: 81 VDIRDYL----EKVDIRDHLEKVDIRDYLE---KVDIRDYLEKVDIRDYLEKVDIRDYLE 133
Query: 93 TMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ IRDY + IRDY + + IRDY + +
Sbjct: 134 EVDIRDYLEKVDIRDYLEKVDIRDYLEEV 162
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = -3
Query: 234 LDIHGFLLKTGVH*FLQVYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGI 55
+DI +L K + +L+ ++ + + IRDYL +DIR Y + IRDY + I
Sbjct: 99 VDIRDYLEKVDIRDYLE---KVDIRDYLEKVDIRDYLEEVDIRDYLEKVDIRDYLEKVDI 155
Query: 54 RDYHQTMGIRDYHQTI 7
RDY + + IRD+ + +
Sbjct: 156 RDYLEEVDIRDHLEKV 171
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ + IRDYL +DIR Y + IRD+ + IRDY + + IRDY + +
Sbjct: 70 EKVDIRDYLEKVDIRDYLEKVDIRDHLEKVDIRDYLEKVDIRDYLEKV 117
Score = 41.5 bits (93), Expect = 5e-04
Identities = 28/84 (33%), Positives = 44/84 (52%)
Frame = -3
Query: 273 VDSHDYFPTFPQCLDIHGFLLKTGVH*FLQVYFHCRLQIIHQTMGIRDYLLTMDIRGYHP 94
VD DY + +DI +L K + +L+ ++ + + IRDYL +DIR Y
Sbjct: 99 VDIRDYL----EKVDIRDYLEKVDIRDYLE---KVDIRDYLEEVDIRDYLEKVDIRDYLE 151
Query: 93 TMGIRDYHPTMGIRDYHQTMGIRD 22
+ IRDY + IRD+ + + IRD
Sbjct: 152 KVDIRDYLEEVDIRDHLEKVDIRD 175
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ + IRD+L +DIR Y + IRDY + IRD+ + + IRDY + +
Sbjct: 7 EKVDIRDHLKEVDIRDYLEKVDIRDYLEKVDIRDHLEKVDIRDYLEKV 54
Score = 40.7 bits (91), Expect = 9e-04
Identities = 24/76 (31%), Positives = 42/76 (55%)
Frame = -3
Query: 234 LDIHGFLLKTGVH*FLQVYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGI 55
+DI +L K + +L+ ++ + + IRDYL +DIR + + IRD+ + I
Sbjct: 18 VDIRDYLEKVDIRDYLE---KVDIRDHLEKVDIRDYLEKVDIRDHLEKVDIRDHLEKVDI 74
Query: 54 RDYHQTMGIRDYHQTI 7
RDY + + IRDY + +
Sbjct: 75 RDYLEKVDIRDYLEKV 90
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ + IRD+L +DIR Y + IRDY + IRD+ + + IRDY + +
Sbjct: 61 EKVDIRDHLEKVDIRDYLEKVDIRDYLEKVDIRDHLEKVDIRDYLEKV 108
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = -3
Query: 138 IRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
IRDYL +DIR + + IRDY + IRDY + + IRD+ + +
Sbjct: 2 IRDYLEKVDIRDHLKEVDIRDYLEKVDIRDYLEKVDIRDHLEKV 45
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/89 (30%), Positives = 45/89 (50%)
Frame = -3
Query: 273 VDSHDYFPTFPQCLDIHGFLLKTGVH*FLQVYFHCRLQIIHQTMGIRDYLLTMDIRGYHP 94
VD DY + +DI +L K + +L+ ++ + + IRDYL +DIR Y
Sbjct: 108 VDIRDYL----EKVDIRDYLEKVDIRDYLE---EVDIRDYLEKVDIRDYLEKVDIRDYLE 160
Query: 93 TMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ IRD+ + IRD + + RDY + +
Sbjct: 161 EVDIRDHLEKVDIRDNLEKVDTRDYLEEV 189
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/89 (30%), Positives = 46/89 (51%)
Frame = -3
Query: 273 VDSHDYFPTFPQCLDIHGFLLKTGVH*FLQVYFHCRLQIIHQTMGIRDYLLTMDIRGYHP 94
VD DY + +DI +L K + L+ ++ + + IRD+L +DIR +
Sbjct: 18 VDIRDYL----EKVDIRDYLEKVDIRDHLE---KVDIRDYLEKVDIRDHLEKVDIRDHLE 70
Query: 93 TMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ IRDY + IRDY + + IRD+ + +
Sbjct: 71 KVDIRDYLEKVDIRDYLEKVDIRDHLEKV 99
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/85 (30%), Positives = 43/85 (50%)
Frame = -3
Query: 273 VDSHDYFPTFPQCLDIHGFLLKTGVH*FLQVYFHCRLQIIHQTMGIRDYLLTMDIRGYHP 94
VD DY + +DI +L + + +L+ ++ + + IRDYL +DIR +
Sbjct: 117 VDIRDYL----EKVDIRDYLEEVDIRDYLE---KVDIRDYLEKVDIRDYLEEVDIRDHLE 169
Query: 93 TMGIRDYHPTMGIRDYHQTMGIRDY 19
+ IRD + RDY + + IRDY
Sbjct: 170 KVDIRDNLEKVDTRDYLEEVDIRDY 194
>SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1892
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ + IRDYL +DIR Y + IRDY + IRDY + + IRDY + +
Sbjct: 636 EKVDIRDYLEKVDIRDYLEKVDIRDYLEKVDIRDYLEKVDIRDYLEKV 683
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ + IRDYL +DIR Y + IRDY + IRDY + + IRDY + +
Sbjct: 645 EKVDIRDYLEKVDIRDYLEKVDIRDYLEKVDIRDYLEKVDIRDYLEEV 692
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = -3
Query: 234 LDIHGFLLKTGVH*FLQVYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGI 55
+DI +L K + +L+ ++ + + IRDYL +DIR Y + IRDY + I
Sbjct: 638 VDIRDYLEKVDIRDYLE---KVDIRDYLEKVDIRDYLEKVDIRDYLEKVDIRDYLEEVDI 694
Query: 54 RDYHQTMGIRDYHQTI 7
RD+ + + IRDY + +
Sbjct: 695 RDHLEKVDIRDYVEKV 710
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = -3
Query: 186 QVYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDY 19
+++FH +Q IRDYL +DIR Y + IRDY + IRDY + + IRD+
Sbjct: 422 RIHFHRPIQA-----NIRDYLEKVDIRDYLEKVDIRDYLEKVDIRDYLEKVDIRDH 472
Score = 41.1 bits (92), Expect = 7e-04
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Frame = -3
Query: 273 VDSHDYFPTFPQCLDIHGFLLKTGVH*FLQ-VYFHCRLQIIH-----QTMGIRDYLLTMD 112
VD DY + +DI L+K + +L+ V F L + + + IRD+L +D
Sbjct: 458 VDIRDYL----EKVDIRDHLVKVDIKDYLEKVDFRDYLDKVDIRDHLEKVDIRDHLEKVD 513
Query: 111 IRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
IR Y + IR++ + IRDY + + IRDY + +
Sbjct: 514 IRDYQEKVDIREHLEKVDIRDYLEKVDIRDYLEKV 548
Score = 41.1 bits (92), Expect = 7e-04
Identities = 25/76 (32%), Positives = 41/76 (53%)
Frame = -3
Query: 234 LDIHGFLLKTGVH*FLQVYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGI 55
+DI +L K + +L+ ++ + + IRD L +DIR Y + IRDY + I
Sbjct: 602 VDIRDYLEKVDIRDYLE---KVDIRDHLEKVDIRDNLEKVDIRDYLEKVDIRDYLEKVDI 658
Query: 54 RDYHQTMGIRDYHQTI 7
RDY + + IRDY + +
Sbjct: 659 RDYLEKVDIRDYLEKV 674
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ + IRDYL +DIR Y + IRDY + IRD+ + I+DY + +
Sbjct: 438 EKVDIRDYLEKVDIRDYLEKVDIRDYLEKVDIRDHLVKVDIKDYLEKV 485
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/85 (31%), Positives = 44/85 (51%)
Frame = -3
Query: 273 VDSHDYFPTFPQCLDIHGFLLKTGVH*FLQVYFHCRLQIIHQTMGIRDYLLTMDIRGYHP 94
VD DY + +DI +L K + +L+ ++ + + IRDYL +DIR Y
Sbjct: 638 VDIRDYL----EKVDIRDYLEKVDIRDYLE---KVDIRDYLEKVDIRDYLEKVDIRDYLE 690
Query: 93 TMGIRDYHPTMGIRDYHQTMGIRDY 19
+ IRD+ + IRDY + + I D+
Sbjct: 691 EVDIRDHLEKVDIRDYVEKVDIWDH 715
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDY 19
+ + IRDYL +DIR Y + IRD+ + I+DY + + RDY
Sbjct: 447 EKVDIRDYLEKVDIRDYLEKVDIRDHLVKVDIKDYLEKVDFRDY 490
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ + IRDYL +DIR + + IRD + IRDY + + IRDY + +
Sbjct: 573 EKVDIRDYLEKVDIRDHLEKVDIRDNLEKVDIRDYLEKVDIRDYLEKV 620
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ + IRDYL +DIR Y + IRD+ + IRD + + IRDY + +
Sbjct: 600 EKVDIRDYLEKVDIRDYLEKVDIRDHLEKVDIRDNLEKVDIRDYLEKV 647
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ + IRDYL +DIR + + IRDY + IR++ + + IRDY + +
Sbjct: 537 EKVDIRDYLEKVDIREHLEKVDIRDYLEKVDIREHLEKVDIRDYLEKV 584
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ + IR++L +DIR Y + IRDY + IR++ + + IRDY + +
Sbjct: 519 EKVDIREHLEKVDIRDYLEKVDIRDYLEKVDIREHLEKVDIRDYLEKV 566
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ + IRDYL +DIR Y + IR++ + IRDY + + IR++ + +
Sbjct: 528 EKVDIRDYLEKVDIRDYLEKVDIREHLEKVDIRDYLEKVDIREHLEKV 575
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = -3
Query: 234 LDIHGFLLKTGVH*FLQVYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGI 55
+DI +L K + +L+ R + + + IRDYL +DIR + + IRDY + I
Sbjct: 530 VDIRDYLEKVDIRDYLEKV-DIREHL--EKVDIRDYLEKVDIREHLEKVDIRDYLEKVDI 586
Query: 54 RDYHQTMGIRD 22
RD+ + + IRD
Sbjct: 587 RDHLEKVDIRD 597
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ + IRD+L +DIR + IRDY + IRDY + + IRD+ + +
Sbjct: 582 EKVDIRDHLEKVDIRDNLEKVDIRDYLEKVDIRDYLEKVDIRDHLEKV 629
Score = 36.3 bits (80), Expect = 0.019
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ + IRDYL +DIR + + I+DY + RDY + IRD+ + +
Sbjct: 456 EKVDIRDYLEKVDIRDHLVKVDIKDYLEKVDFRDYLDKVDIRDHLEKV 503
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ + IRDY +DIR + + IRDY + IRDY + + IR++ + +
Sbjct: 510 EKVDIRDYQEKVDIREHLEKVDIRDYLEKVDIRDYLEKVDIREHLEKV 557
Score = 35.9 bits (79), Expect = 0.025
Identities = 26/89 (29%), Positives = 45/89 (50%)
Frame = -3
Query: 273 VDSHDYFPTFPQCLDIHGFLLKTGVH*FLQVYFHCRLQIIHQTMGIRDYLLTMDIRGYHP 94
VD DY + +DI +L K + L+ ++ + + IR++L +DIR Y
Sbjct: 530 VDIRDYL----EKVDIRDYLEKVDIREHLE---KVDIRDYLEKVDIREHLEKVDIRDYLE 582
Query: 93 TMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+ IRD+ + IRD + + IRDY + +
Sbjct: 583 KVDIRDHLEKVDIRDNLEKVDIRDYLEKV 611
Score = 35.5 bits (78), Expect = 0.032
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRD 22
+ + IRD L +DIR Y + IRDY + IRD+ + + IRD
Sbjct: 591 EKVDIRDNLEKVDIRDYLEKVDIRDYLEKVDIRDHLEKVDIRD 633
Score = 35.1 bits (77), Expect = 0.043
Identities = 25/84 (29%), Positives = 42/84 (50%)
Frame = -3
Query: 273 VDSHDYFPTFPQCLDIHGFLLKTGVH*FLQVYFHCRLQIIHQTMGIRDYLLTMDIRGYHP 94
VD DY + +DI +L K + +L+ ++ + + IRDYL +DIR +
Sbjct: 647 VDIRDYL----EKVDIRDYLEKVDIRDYLE---KVDIRDYLEKVDIRDYLEEVDIRDHLE 699
Query: 93 TMGIRDYHPTMGIRDYHQTMGIRD 22
+ IRDY + I D+ + +RD
Sbjct: 700 KVDIRDYVEKVDIWDHLEEADVRD 723
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -3
Query: 114 DIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+IR Y + IRDY + IRDY + + IRDY + +
Sbjct: 432 NIRDYLEKVDIRDYLEKVDIRDYLEKVDIRDYLEKV 467
>SB_55969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/81 (20%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = -3
Query: 240 QCLDIHGFLLKTGVH*FLQ---VYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYH 70
+C D+H L VH L+ V++ + +H ++ +D +++ + H ++ +D H
Sbjct: 10 ECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVH 69
Query: 69 PTMGIRDYHQTMGIRDYHQTI 7
++ +D H ++ +D H ++
Sbjct: 70 YSLECKDVHYSLECKDVHYSL 90
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/81 (20%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = -3
Query: 240 QCLDIHGFLLKTGVH*FLQ---VYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYH 70
+C D+H L VH L+ V++ + +H ++ +D +++ + H ++ +D H
Sbjct: 19 ECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVH 78
Query: 69 PTMGIRDYHQTMGIRDYHQTI 7
++ +D H ++ +D H ++
Sbjct: 79 YSLECKDVHYSLECKDVHYSL 99
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/81 (20%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = -3
Query: 240 QCLDIHGFLLKTGVH*FLQ---VYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYH 70
+C D+H L VH L+ V++ + +H ++ +D +++ + H ++ +D H
Sbjct: 28 ECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVH 87
Query: 69 PTMGIRDYHQTMGIRDYHQTI 7
++ +D H ++ +D H ++
Sbjct: 88 YSLECKDVHYSLECKDVHYSL 108
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/81 (20%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = -3
Query: 240 QCLDIHGFLLKTGVH*FLQ---VYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYH 70
+C D+H L VH L+ V++ + +H ++ +D +++ + H ++ +D H
Sbjct: 37 ECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVH 96
Query: 69 PTMGIRDYHQTMGIRDYHQTI 7
++ +D H ++ +D H ++
Sbjct: 97 YSLECKDVHYSLECKDVHYSL 117
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/81 (20%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = -3
Query: 240 QCLDIHGFLLKTGVH*FLQ---VYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYH 70
+C D+H L VH L+ V++ + +H ++ +D +++ + H ++ +D H
Sbjct: 46 ECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVH 105
Query: 69 PTMGIRDYHQTMGIRDYHQTI 7
++ +D H ++ +D H ++
Sbjct: 106 YSLECKDVHYSLECKDVHYSL 126
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = -3
Query: 240 QCLDIHGFLLKTGVH*FLQ---VYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYH 70
+C D+H L VH L+ V++ + +H ++ +D +++ + H ++ +D H
Sbjct: 73 ECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDAH 132
Query: 69 PTMGIRDYHQTMGIRDYH 16
++ +D H ++ RD H
Sbjct: 133 YSLECKDVHYSLECRDVH 150
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/81 (20%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = -3
Query: 240 QCLDIHGFLLKTGVH*FLQ---VYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYH 70
+C D+H L VH L+ V++ + +H ++ +D +++ + H ++ +D H
Sbjct: 55 ECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVH 114
Query: 69 PTMGIRDYHQTMGIRDYHQTI 7
++ +D H ++ +D H ++
Sbjct: 115 YSLECKDVHYSLECKDAHYSL 135
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/81 (20%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = -3
Query: 240 QCLDIHGFLLKTGVH*FLQ---VYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYH 70
+C D+H L VH L+ V++ + +H ++ +D +++ + H ++ +D H
Sbjct: 64 ECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVH 123
Query: 69 PTMGIRDYHQTMGIRDYHQTI 7
++ +D H ++ +D H ++
Sbjct: 124 YSLECKDAHYSLECKDVHYSL 144
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/80 (21%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = -3
Query: 237 CLDIHGFLLKTGVH*FLQ---VYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHP 67
C D+H L VH L+ V++ + +H ++ +D +++ + H ++ +D H
Sbjct: 2 CKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHY 61
Query: 66 TMGIRDYHQTMGIRDYHQTI 7
++ +D H ++ +D H ++
Sbjct: 62 SLECKDVHYSLECKDVHYSL 81
>SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099)
Length = 2489
Score = 37.1 bits (82), Expect = 0.011
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = -3
Query: 156 IHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYH 16
+H + +R+ + +R HP+ +R+ HP+ +R+ H + +R+ H
Sbjct: 1774 MHPSRPVREMHPSRPVREMHPSKPVREMHPSSPVREMHSSRAVREMH 1820
Score = 37.1 bits (82), Expect = 0.011
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = -3
Query: 156 IHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYH 16
+H + +R+ + +R HP+ +R+ HP+ +R+ H + +R+ H
Sbjct: 1810 MHSSRAVREMHPSRPVREMHPSSPVREMHPSRPVREMHPSKPVREMH 1856
Score = 35.9 bits (79), Expect = 0.025
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = -3
Query: 156 IHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYH 16
+H + +R+ + +R HP+ +R+ HP+ +R+ H + +R+ H
Sbjct: 1801 MHPSSPVREMHSSRAVREMHPSRPVREMHPSSPVREMHPSRPVREMH 1847
Score = 35.9 bits (79), Expect = 0.025
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = -3
Query: 156 IHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYH 16
+H + +R+ + +R HP+ +R+ HP+ +R+ H + +R+ H
Sbjct: 1819 MHPSRPVREMHPSSPVREMHPSRPVREMHPSKPVREMHPSRPVREMH 1865
Score = 35.9 bits (79), Expect = 0.025
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = -3
Query: 156 IHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYH 16
+H + +R+ + +R HP+ +R+ HP+ +R+ H + +R+ H
Sbjct: 1828 MHPSSPVREMHPSRPVREMHPSKPVREMHPSRPVREMHPSRPVREMH 1874
Score = 34.7 bits (76), Expect = 0.057
Identities = 12/49 (24%), Positives = 28/49 (57%)
Frame = -3
Query: 156 IHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQT 10
+H + +R+ + +R HP+ +R+ HP+ +R+ H + +R+ + T
Sbjct: 1837 MHPSRPVREMHPSKPVREMHPSRPVREMHPSRPVREMHPSRPVREMNPT 1885
Score = 33.9 bits (74), Expect = 0.099
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = -3
Query: 138 IRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQT 10
+R+ + +R HP+ +R+ HP+ +R+ H + +R+ H +
Sbjct: 1771 VREMHPSRPVREMHPSRPVREMHPSKPVREMHPSSPVREMHSS 1813
>SB_45362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/80 (21%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = -3
Query: 237 CLDIHGFLLKTGVH*FLQ---VYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHP 67
C D+H L VH L+ V++ + +H ++ +D +++ + H ++ +D H
Sbjct: 2 CKDVHYSLEYKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHY 61
Query: 66 TMGIRDYHQTMGIRDYHQTI 7
++ +D H ++ +D H ++
Sbjct: 62 SLECKDVHYSLECKDVHYSL 81
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/78 (20%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = -3
Query: 231 DIHGFLLKTGVH*FLQ---VYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTM 61
D+H L VH L+ V++ + +H ++ +D +++ + H ++ +D H ++
Sbjct: 13 DVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSLECKDVHYSL 72
Query: 60 GIRDYHQTMGIRDYHQTI 7
+D H ++ +D H ++
Sbjct: 73 ECKDVHYSLECKDAHYSL 90
>SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 132 DYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTIH 4
DY M R Y M RDY + RDY + + RDY + ++
Sbjct: 121 DYDRVMSYRDYDRVMSYRDYERVVSYRDYERVLYYRDYERVLY 163
Score = 35.9 bits (79), Expect = 0.025
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDY 19
+ M RDY M R Y + RDY + RDY + + RDY
Sbjct: 124 RVMSYRDYDRVMSYRDYERVVSYRDYERVLYYRDYERVLYYRDY 167
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 35.5 bits (78), Expect = 0.032
Identities = 22/64 (34%), Positives = 23/64 (35%)
Frame = +3
Query: 189 GTNGHPSSGGNHGYPGTGGMSGNNHGYQPKKPAVYQYNPPQQIRYTPVGGGSPVNYPVYR 368
G G P GG GY G G G GY Y Y Y GG +Y Y
Sbjct: 436 GGRGGPRGGGPRGYDGGYGQGGGYEGYSGGYRDDYGYGGGSYDHYDSYYGGGYDDY--YG 493
Query: 369 GSPP 380
G PP
Sbjct: 494 GGPP 497
>SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05)
Length = 346
Score = 35.5 bits (78), Expect = 0.032
Identities = 27/68 (39%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 189 GTNGHPSSGGNHGYPGTGGMSGNNHGYQPKKPAVYQYNPPQQIRYTPVGGGSPVNYPVYR 368
GT G P G G PG+ G+SG GY P P +PP P G P P YR
Sbjct: 45 GTEGPPGPQGTKGPPGSQGLSG-VQGY-PGAPGPRGRSPP-----GPPGIPGPRGLPGYR 97
Query: 369 G--SPPTY 386
G PP Y
Sbjct: 98 GPKGPPGY 105
>SB_23827| Best HMM Match : DUF809 (HMM E-Value=9.1)
Length = 159
Score = 35.1 bits (77), Expect = 0.043
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 153 HQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQT 10
H T + Y +T + YH T + YH T + YH T + YH T
Sbjct: 39 HVTYYVTPYHVTYCVTPYHVTYCVTPYHVTYYVTPYHVTYSVTLYHVT 86
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -3
Query: 153 HQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQT 10
H T + Y +T + YH + YH T + YH T + YH T
Sbjct: 12 HMTYYVTSYHVTYCMTPYHVPDCVTPYHVTYYVTPYHVTYCVTPYHVT 59
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -3
Query: 138 IRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQT 10
+ Y +T + YH T + YH T + YH T + YH T
Sbjct: 35 VTPYHVTYYVTPYHVTYCVTPYHVTYCVTPYHVTYYVTPYHVT 77
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -3
Query: 153 HQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTIH 4
H T + Y + + YH T + YH T + YH T + YH T +
Sbjct: 21 HVTYCMTPYHVPDCVTPYHVTYYVTPYHVTYCVTPYHVTYCVTPYHVTYY 70
Score = 30.7 bits (66), Expect = 0.92
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 153 HQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDY 19
H T + Y +T + YH T + YH T + YH T + Y
Sbjct: 48 HVTYCVTPYHVTYCVTPYHVTYYVTPYHVTYSVTLYHVTYCVTPY 92
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -3
Query: 138 IRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQT 10
+ Y +T + YH T + YH + YH T + YH T
Sbjct: 8 VTSYHMTYYVTSYHVTYCMTPYHVPDCVTPYHVTYYVTPYHVT 50
>SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/40 (47%), Positives = 20/40 (50%)
Frame = +3
Query: 189 GTNGHPSSGGNHGYPGTGGMSGNNHGYQPKKPAVYQYNPP 308
G NG P G HG PGT G SGN+ G K A PP
Sbjct: 35 GKNGIPGIPGVHGKPGTPGKSGND-GRNGKPGAPGPKGPP 73
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +3
Query: 183 PGGTNGHPSSGGNHGYPGTGGMSGNNHGYQPKKPAVYQYNPPQQIRY 323
P G G P + +G P T G G P +P+ YN P Y
Sbjct: 83 PSGQYGAPPTSQPYGAPPTSGYPGYQQHPPPPQPSAQSYNAPPPAGY 129
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 183 PGGTNGHPSSGGNHGYPGTGGMS-GNNHGYQPKKPAVYQYNPPQQIRYTPVGGGSPVNYP 359
P G+P + G GYP +GG GY P +P Y PP +GG P
Sbjct: 31 PPAPGGYPPAPG--GYPPSGGYGYPPAGGYPPPQPG-YAGGPPPPGIAPGIGGPPPSG-- 85
Query: 360 VYRGSPPT 383
G+PPT
Sbjct: 86 -QYGAPPT 92
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/54 (38%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Frame = +3
Query: 225 GYP--GTGGMSGNNHGYQPKKPAVYQYNPPQQIRYTPVGGGSPVNYPVYRGSPP 380
GYP GG GY P P Y PP P GG P P Y G PP
Sbjct: 21 GYPPAAPGGYPPAPGGYPPA-PGGY---PPSGGYGYPPAGGYPPPQPGYAGGPP 70
>SB_38138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 568
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/59 (28%), Positives = 35/59 (59%)
Frame = -3
Query: 183 VYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
VY +Q ++QT+ I+ T+ I+ + T+ I+ + T+ I+ +QT+ I+ +QT+
Sbjct: 88 VYQTVSIQYVYQTVSIQYAYRTVSIQYAYRTVSIQYAYRTVSIQYVYQTVSIQYAYQTV 146
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/53 (26%), Positives = 33/53 (62%)
Frame = -3
Query: 165 LQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+Q ++QT+ I+ T+ I+ + T+ I+ + T+ I+ +QT+ I+ ++T+
Sbjct: 58 IQYVYQTVSIQYAYQTVSIQYAYRTVSIQYVYQTVSIQYVYQTVSIQYAYRTV 110
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/59 (27%), Positives = 34/59 (57%)
Frame = -3
Query: 183 VYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
VY +Q ++T+ I+ T+ I+ + T+ I+ + T+ I+ +QT+ I+ +QT+
Sbjct: 97 VYQTVSIQYAYRTVSIQYAYRTVSIQYAYRTVSIQYVYQTVSIQYAYQTVSIQFAYQTV 155
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/58 (25%), Positives = 34/58 (58%)
Frame = -3
Query: 180 YFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
Y+ +Q +QT+ I+ T+ I+ + T+ I+ + T+ I+ +QT+ I+ ++T+
Sbjct: 413 YWTVSIQYAYQTVSIQYAYQTVSIQYAYRTVSIQYAYQTVSIQFAYQTVSIQYVYRTV 470
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/53 (28%), Positives = 32/53 (60%)
Frame = -3
Query: 165 LQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+Q +QT+ I+ T+ I+ + T+ I+ + T+ I+ +QT+ I+ +QT+
Sbjct: 445 IQYAYQTVSIQFAYQTVSIQYVYRTVSIQYAYRTVSIQFAYQTVSIQYAYQTV 497
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/53 (26%), Positives = 32/53 (60%)
Frame = -3
Query: 165 LQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+Q ++T+ I+ T+ I+ + T+ I+ + T+ I+ +QT+ I+ +QT+
Sbjct: 49 IQYAYRTVSIQYVYQTVSIQYAYQTVSIQYAYRTVSIQYVYQTVSIQYVYQTV 101
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/53 (28%), Positives = 32/53 (60%)
Frame = -3
Query: 165 LQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+Q +QT+ I+ T+ I+ + T+ I+ + T+ I+ +QT+ I+ +QT+
Sbjct: 301 IQYAYQTVSIQYVYRTVSIQYAYRTVSIQYAYWTVSIQFAYQTVSIQYAYQTV 353
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = -3
Query: 180 YFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
Y+ +Q +QT+ I+ T+ I+ + + I+ + T+ I+ +QT+ I+ QT+
Sbjct: 332 YWTVSIQFAYQTVSIQYAYQTVSIQYAYQAVSIQYAYQTVSIQYAYQTVSIQYAFQTV 389
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/53 (26%), Positives = 33/53 (62%)
Frame = -3
Query: 165 LQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+Q ++QT+ I+ T+ I+ + T+ I+ + T+ I+ +QT+ I+ ++T+
Sbjct: 391 IQYVYQTVSIQYAYQTVSIQYAYWTVSIQYAYQTVSIQYAYQTVSIQYAYRTV 443
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/53 (28%), Positives = 31/53 (58%)
Frame = -3
Query: 165 LQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+Q QT+ I+ T+ I+ + T+ I+ + T+ I+ +QT+ I+ +QT+
Sbjct: 382 IQYAFQTVSIQYVYQTVSIQYAYQTVSIQYAYWTVSIQYAYQTVSIQYAYQTV 434
>SB_25003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 31.5 bits (68), Expect = 0.53
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 195 NGHPSSGGNHGYPGTGGMSGNNHGYQPKKPA-VYQYN-PPQQIRYTPVGGGSPVNYPVYR 368
+GHP+ GYP SG+ +GYQ YQY+ P +Y+ G P Y Y
Sbjct: 74 SGHPNGYQYSGYPNGYQYSGHPNGYQYSGHLNGYQYSGHPNGYQYS----GHPNGYQ-YS 128
Query: 369 GSPPTYVYQVKDSG 410
G P Y Y +G
Sbjct: 129 GHPNGYQYSGHPNG 142
Score = 31.1 bits (67), Expect = 0.70
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Frame = +3
Query: 186 GGTNGHPSSGGNHGYPGTGGM-----SGNNHGYQ-PKKPAVYQYN-PPQQIRYTPVGGGS 344
G NG+ SG +GY +G + SG+ +GYQ P YQY+ P +Y+ G
Sbjct: 84 GYPNGYQYSGHPNGYQYSGHLNGYQYSGHPNGYQYSGHPNGYQYSGHPNGYQYS----GH 139
Query: 345 PVNYPVYRGSPPTYVYQVKDSG 410
P Y Y G P Y Y +G
Sbjct: 140 PNGYQ-YSGHPNGYQYSGHPNG 160
>SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2)
Length = 352
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 198 GHPSSGGNHGYPGTGGMSGNNHGY 269
G+PS+G N GYPG GNN GY
Sbjct: 249 GYPSNG-NMGYPGNRNGMGNNMGY 271
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +3
Query: 189 GTNGHPSSGGNHGYPGTGGMS--GNNHGYQPKKPAVYQYNPPQQIRYTPVGGGSPVNYP 359
G G+PS+ N GYP G M GN +G N + Y P G + YP
Sbjct: 237 GNMGYPSNNNNMGYPSNGNMGYPGNRNGMGNNMGYPSNGNGNGNMGY-PSNGNGNMGYP 294
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 186 GGTNGHPSSGGNHGYPGTGG-MSGNNHG 266
GG NG ++GGN G GG GNN+G
Sbjct: 544 GGNNGGSNNGGNDGSNNNGGNTGGNNNG 571
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 186 GGTNGHPSSGGNHGYPGTGGMSGNNHG 266
GG +G ++GGN G GG +G N+G
Sbjct: 553 GGNDGSNNNGGNTGGNNNGGNTGGNNG 579
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 180 KPGGTNGHPSSGGNHGYPGTGG-MSGNNHG 266
K G TNG ++GGN+G GG G+N+G
Sbjct: 422 KGGNTNGGNNNGGNNGGNNNGGNTGGDNNG 451
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 186 GGTNGHPSSGGNHGYPGTGGMSGNNHG 266
GG G ++GGN G GG +G N+G
Sbjct: 579 GGNTGGNNNGGNTGGNNNGGNTGGNNG 605
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 186 GGTNGHPSSGGNHGYPGTGGMSGNNHG 266
GG G ++GGN G GG +G N+G
Sbjct: 605 GGNTGGNNNGGNTGGNNNGGNTGGNNG 631
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 186 GGTNGHPSSGGNHGYPGTGGMSGNNHG 266
GG N ++GGN+ TGG +G N G
Sbjct: 583 GGNNNGGNTGGNNNGGNTGGNNGGNTG 609
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 186 GGTNGHPSSGGNHGYPGTGGMSGNNHG 266
GG N ++GGN+ TGG +G N G
Sbjct: 609 GGNNNGGNTGGNNNGGNTGGNNGGNTG 635
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 186 GGTNGHPSSGGNHGYPGTGGMSGNNHG 266
GG G ++GGN G G GNN+G
Sbjct: 562 GGNTGGNNNGGNTGGNNGGNTGGNNNG 588
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 186 GGTNGHPSSGGNHGYPGTGGMSGNNHG 266
GG G ++GGN G G GNN+G
Sbjct: 588 GGNTGGNNNGGNTGGNNGGNTGGNNNG 614
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 186 GGTNGHPSSGGNHGYPGTGGMSGNNHG 266
GG G ++GGN G G GNN+G
Sbjct: 614 GGNTGGNNNGGNTGGNNGGNTGGNNNG 640
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 186 GGTNGHPSSGGNHGYPGTGGMSGNNH 263
G NG ++GGN+G GG G+N+
Sbjct: 535 GENNGGNNNGGNNGGSNNGGNDGSNN 560
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +3
Query: 186 GGTNGHPSSGGNHGYPGTGG--MSGNNHG 266
GG N ++GGN+ TGG GNN+G
Sbjct: 428 GGNNNGGNNGGNNNGGNTGGDNNGGNNYG 456
>SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1041
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 273 PKKPAVYQYNPPQQIRYTPVGGGSPVNYPVYRGSP 377
P P QY+P QQI+Y +P NY V+RG P
Sbjct: 538 PPAPGQPQYHPAQQIQYQ-----NPGNYRVHRGPP 567
>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
Length = 892
Score = 31.1 bits (67), Expect = 0.70
Identities = 22/71 (30%), Positives = 26/71 (36%)
Frame = +3
Query: 201 HPSSGGNHGYPGTGGMSGNNHGYQPKKPAVYQYNPPQQIRYTPVGGGSPVNYPVYRGSPP 380
H G H Y G + N GY P++P PP Y P P P Y G PP
Sbjct: 812 HAPPGQAH-YQQLGAAAPNQGGYHPQQP------PPPPQGYEPQPQYQPQGPPQYYGGPP 864
Query: 381 TYVYQVKDSGS 413
Q + S
Sbjct: 865 PQQQQQRQPQS 875
>SB_26644| Best HMM Match : Collagen (HMM E-Value=0)
Length = 877
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/65 (33%), Positives = 25/65 (38%)
Frame = +3
Query: 183 PGGTNGHPSSGGNHGYPGTGGMSGNNHGYQPKKPAVYQYNPPQQIRYTPVGGGSPVNYPV 362
P G NG P G G G G+SG P+ A Q PP P G PV
Sbjct: 797 PSGKNGEPGPQGPEGEAGANGVSGPKGEMGPEGEA-GQPGPP-----GPPGPNGPVGQTG 850
Query: 363 YRGSP 377
G+P
Sbjct: 851 QPGTP 855
>SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024)
Length = 60
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 189 GTNGHPSSGGNHGYPGTGGMSG 254
G +G P G HG+PG GM G
Sbjct: 23 GRDGRPGPPGRHGFPGQRGMPG 44
>SB_45304| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 186 GGTNGHPSSGGNHGYPGTGGMSGNNHGYQPK 278
GG++G+ + G++GY G GG N++G K
Sbjct: 406 GGSSGNGAEEGDNGYSGGGGAGLNSNGRNNK 436
>SB_29755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -3
Query: 147 TMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRD 22
T + D +T ++ G T + D H T + D H T + D
Sbjct: 75 TKALEDRRITKELEGRRVTKALEDRHVTKALEDRHVTKALED 116
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 186 GGTNGHPSSGGNHGYPGTGGMSGNNHGYQPKK 281
G G P GG GY G G N+ YQ K
Sbjct: 197 GDYGGGPGYGGGQGYGSYSGGGGGNYDYQGNK 228
>SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07)
Length = 195
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = +3
Query: 189 GTNGHPSSGGNHGYPGTGGMSGNNHGYQPKKPAVYQYNPP 308
G NG P G G PGT G SGN+ G K A PP
Sbjct: 35 GKNGIPGIPGVPGKPGTPGKSGND-GRNGKPGAPGPKGPP 73
>SB_30949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/59 (20%), Positives = 28/59 (47%)
Frame = -3
Query: 183 VYFHCRLQIIHQTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRDYHQTI 7
+Y L+ I+ +G+R +DIR + + IR + + +R + + +R + +
Sbjct: 62 IYSALGLRPIYSALGLRPIYSALDIRPIYSALDIRPIYSALDLRPIYSALDLRPIYSAL 120
>SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8)
Length = 291
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 189 GTNGHPSSGGNHGYPGTGGMSGN 257
G NG+ SSG N+G GG GN
Sbjct: 138 GENGYRSSGTNYGQSRAGGTGGN 160
>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
Length = 496
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +3
Query: 261 HGYQPKKPAVYQYNPPQQIRYTPVGGGSPVNYPVYRGSPPTY 386
H Y P+ P Y PP IRY P+ P + P Y S P Y
Sbjct: 311 HRY-PQSPLRY---PPSPIRYPPLPSRYPPSPPRYPSSHPRY 348
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 282 PAVYQYNPPQQIRYTPVGGGSPVNYPVYRGSPPTY 386
P+ +Y PP RY P P ++P Y SPP Y
Sbjct: 322 PSPIRY-PPLPSRYPPSPPRYPSSHPRYPPSPPRY 355
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 273 PKKPAVYQYNPPQQIRYTPVGGGSPVNYPVYRGSPPTYV 389
P+ P+ + PP RY P P ++P Y SP Y+
Sbjct: 339 PRYPSSHPRYPPSPPRYPPSPPRYPSSHPRYPPSPLRYL 377
>SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10)
Length = 559
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 183 PGGTNGHPSSGGNHGYPGTGGMSGNNHG 266
PGG G G G+PG GGM G G
Sbjct: 179 PGGMPGGMPGGMPGGFPGAGGMPGGFPG 206
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Frame = +3
Query: 186 GGTNGHPSSGGNHG-YPGTGGMSGNNHGYQ----PKKPAVYQ-YNPPQQIRYTPVGGGSP 347
G G P +GG G +PG GGM G G P V Q + P+ + +P
Sbjct: 199 GMPGGFPGAGGMPGGFPGAGGMPGGPGGIDINTILNDPEVMQAFQDPEVMAAFQDVNQNP 258
Query: 348 VNYPVYRGSP 377
N Y+ +P
Sbjct: 259 ANMAKYQNNP 268
>SB_51325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRD 22
++ G+R+ + +R + G+RD + G RD ++ G+RD
Sbjct: 43 ESQGLRNAGESRGLRNADESQGLRDAGKSQGFRDQGESRGLRD 85
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -3
Query: 150 QTMGIRDYLLTMDIRGYHPTMGIRDYHPTMGIRDYHQTMGIRD 22
++ G+RD + +R + G+R+ + G+RD ++ G RD
Sbjct: 34 ESQGLRDEGESQGLRNAGESRGLRNADESQGLRDAGKSQGFRD 76
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +3
Query: 270 QPKKPAVYQYNPPQQIRYTPVGGGSPVNYPVYRGSPPTY 386
QP P PP Y P+ P P Y + P+Y
Sbjct: 197 QPSYPPTAPSYPPTPSSYPPIAASYPPTAPSYNPTAPSY 235
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = +3
Query: 273 PKKPAVYQYNPPQQIRYTPVGGGSPVNYPVYRGSPPTY 386
P P + PP Q Y P P P Y + P+Y
Sbjct: 170 PSYPPTQPFYPPTQPFYPPTPSSYPPTQPSYPPTAPSY 207
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/75 (30%), Positives = 25/75 (33%)
Frame = +3
Query: 186 GGTNGHPSSGGNHGYPGTGGMSGNNHGYQPKKPAVYQYNPPQQIRYTPVGGGSPVNYPVY 365
GG G GG G G GG G GY Y Y GGG +Y Y
Sbjct: 200 GGYGGRGRGGGGRGGYGGGGGYGGYGGYDQYSGGGYGGYGDSYGSYGG-GGGYGSSYGSY 258
Query: 366 RGSPPTYVYQVKDSG 410
G +Y SG
Sbjct: 259 DGYGSMGMYNQSSSG 273
>SB_8542| Best HMM Match : PT (HMM E-Value=4)
Length = 650
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +3
Query: 201 HPSSGGNHGYPGTGGMSGNNHGYQPKKPAVYQYNPPQQIRYTPVGGGSPVNYPVYRGSPP 380
+PS Y +G + +P+ Y + PQ RY P G P YP G+P
Sbjct: 277 YPSGNPQSRYYPSGNPQPRYYPSGNPQPSYYPFGNPQP-RYYPYGNPQPKYYP--SGNPQ 333
Query: 381 TYVY 392
+ Y
Sbjct: 334 SRYY 337
>SB_24257| Best HMM Match : DUF583 (HMM E-Value=0.16)
Length = 3999
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 183 PGGTNGHPSSGGNHGYPGTGGMSGNNHGY 269
PGGT P +GG G GTGG G G+
Sbjct: 2938 PGGTG--PGAGGTLGSRGTGGGYGGKGGH 2964
>SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 189 GTNGHPSSGGNHGYPGTGGMSG 254
G NG P G G PGT G SG
Sbjct: 151 GANGQPGLPGRDGVPGTVGESG 172
>SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +3
Query: 183 PGGTNGHPSSGGNHGYPGTGGMSG--NNHG 266
P GT G P G+ G PG G+ G NN G
Sbjct: 244 PKGTPGDPGPTGSRGRPGKPGLPGDLNNIG 273
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 183 PGGTNGHPSSGGNHGYPGTGGMSGNNHG 266
P G NG P G G PG G +GN G
Sbjct: 727 PPGPNGPPGPNGPLGPPGECGPAGNAGG 754
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +3
Query: 183 PGGTNGHPSSGGNHGYPGTGGMSGN--NHGYQPKKP 284
P G G P G G PG G +GN G QP P
Sbjct: 897 PPGPKGPPGPNGCLGPPGDAGPAGNTGGAGCQPAPP 932
>SB_50003| Best HMM Match : PAN (HMM E-Value=0.044)
Length = 286
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 466 LAQLTLAAIAVTNIPPNQVKRVCLAFKKTTATMRKLKS 579
L T AA AV + PP Q R +AF +TT + KS
Sbjct: 78 LDNYTSAAAAVPSTPPKQDPRSTVAFGRTTKSSPVQKS 115
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Frame = +3
Query: 183 PGGTNGHPSSGGNHGYPGTGGMSGNNHGYQPKKPAVYQYNP---PQQIRYTPVGGGSPVN 353
PG + PSSG + P + S + Y P P+ +P P Y+P
Sbjct: 438 PGYSPSSPSSGYS---PASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 494
Query: 354 YPVYRGSPPTY 386
P Y + P+Y
Sbjct: 495 SPSYSPTSPSY 505
>SB_6496| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1234
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 183 PGGTNGHPSSGGNHGYPGTGGMSGNNHGYQPKK 281
P G G P G G G+ G+ G NHG Q ++
Sbjct: 102 PNGAPGRPGVRGPKGESGSRGLPG-NHGVQGER 133
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 183 PGGTNGHPSSGGNHGYPGTGGMSG 254
PGG G P +GG G P GG G
Sbjct: 239 PGGYPGAPPAGGYPGAPPPGGYPG 262
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 246 MSGNNHGYQPKKPAVYQYNPPQQIRYTPVGGGSPVNYPVYRGS 374
M G +G Q A Q PP P+GGG P P Y+G+
Sbjct: 258 MGGGQYGGQYMHQAP-QGGPPGYGANMPMGGGPPTAAPGYQGA 299
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,016,360
Number of Sequences: 59808
Number of extensions: 341924
Number of successful extensions: 1504
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -