Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_I24
         (344 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   1.0  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   4.1  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   4.1  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   4.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    20   9.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   9.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   9.5  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   9.5  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 51  SSPYWPWLPQTEFTWWTIVVFHRTAIV 131
           S+P W + P   FTW  I V    A+V
Sbjct: 549 SAPVWRFQPWGPFTWGGIGVVVLFAVV 575


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 14/56 (25%), Positives = 22/56 (39%)
 Frame = +2

Query: 122 GNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNPLARGG 289
           GN+  + I  P P   +         EP +  P ++    P +P  R + P A  G
Sbjct: 71  GNNRPIYIPQPRPPHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLRRE-PEAEPG 125


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 1   RQTTLTLFDNESFRVFLLRRIGHGCRKQSSR 93
           RQ    L  +ESFR    R     CRK+  +
Sbjct: 427 RQFLYCLAGDESFRKRRQREAAGNCRKRGEK 457


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = +2

Query: 155 DPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRY 265
           DP+F + ++        ++     +D NHP +  K Y
Sbjct: 171 DPWFPRHASDLDNCNHLMTKFEPDLDMNHPGFADKEY 207


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 341 IIISPSFKIAYLYETFTSHHGREG 270
           ++   +F    LY++    HG+EG
Sbjct: 65  LLCQKAFDQKNLYQSHLRSHGKEG 88


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 238  SSQLSTQAIRQPSRPWWE 291
            S+ L+  A+  P+R W++
Sbjct: 1330 SATLACNAVGDPTREWYK 1347


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 238  SSQLSTQAIRQPSRPWWE 291
            S+ L+  A+  P+R W++
Sbjct: 1326 SATLACNAVGDPTREWYK 1343


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = +1

Query: 277 RPWWE 291
           RPWWE
Sbjct: 74  RPWWE 78


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,917
Number of Sequences: 438
Number of extensions: 2241
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7812315
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)