Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_I23
         (469 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J03069-1|AAA59883.1|  357|Homo sapiens MYCL2 protein.                  29   8.0  
AC004081-1|AAB97938.1|  358|Homo sapiens WUGSC:H_DJ0320J15.1 pro...    29   8.0  

>J03069-1|AAA59883.1|  357|Homo sapiens MYCL2 protein.
          Length = 357

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
 Frame = -3

Query: 458 PAHTYSPEDNSEKYHKYAAARRQNYLHSTYYVL--SIHTLYTINFVLKILFHKITLEYSH 285
           P H  +     +KYH Y   +R+N   S +  L   +  L + + V K++      EY H
Sbjct: 265 PIHYDTENWTKKKYHSYLERKRRNDQRSRFLALRDEVPALASCSRVSKVMILVKATEYLH 324

Query: 284 IITQCNND*FANHKRTL 234
            + +   +  A  KR L
Sbjct: 325 ELAEA-EERMATEKRQL 340


>AC004081-1|AAB97938.1|  358|Homo sapiens WUGSC:H_DJ0320J15.1
           protein.
          Length = 358

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
 Frame = -3

Query: 458 PAHTYSPEDNSEKYHKYAAARRQNYLHSTYYVL--SIHTLYTINFVLKILFHKITLEYSH 285
           P H  +     +KYH Y   +R+N   S +  L   +  L + + V K++      EY H
Sbjct: 266 PIHYDTENWTKKKYHSYLERKRRNDQRSRFLALRDEVPALASCSRVSKVMILVKATEYLH 325

Query: 284 IITQCNND*FANHKRTL 234
            + +   +  A  KR L
Sbjct: 326 ELAEA-EERMATEKRQL 341


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,874,538
Number of Sequences: 237096
Number of extensions: 1342449
Number of successful extensions: 2461
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2461
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)