Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_I21
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    24   0.93 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.8  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   5.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.7  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 315 AAGKVNLFHNDXHDTTAKAFATRNMPDI 398
           AA K+N FH    D+ +  F   ++PD+
Sbjct: 235 AASKLNSFHWHITDSHSFPFTAESLPDL 262


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 315 AAGKVNLFHNDXHDTTAKAFATRNMPDIA 401
           AA K+N+FH    D+ +    ++ +P +A
Sbjct: 265 AANKLNVFHWHLTDSQSFPLVSQRVPQLA 293


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/48 (22%), Positives = 23/48 (47%)
 Frame = -1

Query: 628 PKLVSQEDFMKGVSNFLKPALKSTEVSGLLKRFSFPSRE*SLRLMKSV 485
           PK V  +   + +SN  + +L++ ++   L     P    S R+M+ +
Sbjct: 257 PKCVLSDHGTQFISNTWQNSLRAADIQPTLSSIRHPESNPSERVMREL 304


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +2

Query: 92  ARSSHAQLRWYLWCWS*STLCW 157
           AR  HA+     WC+     CW
Sbjct: 572 ARGIHAEALVPRWCYQNEGECW 593


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 148  GTLTPAPEVPSE 113
            GT+ PA E+P E
Sbjct: 1587 GTIAPAREIPKE 1598


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,441
Number of Sequences: 336
Number of extensions: 3126
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)