Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_I21
(640 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 36 0.092
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 36 0.092
BC001940-1|AAH01940.2| 748|Homo sapiens hypothetical protein DK... 31 3.4
AK074809-1|BAC11221.1| 748|Homo sapiens protein ( Homo sapiens ... 31 3.4
AB162218-1|BAD36741.1| 748|Homo sapiens hFLEG1 protein. 31 3.4
BC065530-1|AAH65530.1| 1003|Homo sapiens methyl-CpG binding doma... 31 4.6
AK056399-1|BAB71176.1| 1003|Homo sapiens protein ( Homo sapiens ... 31 4.6
AB067474-1|BAB67780.1| 967|Homo sapiens KIAA1887 protein protein. 31 4.6
AF179681-1|AAF72107.1| 1156|Homo sapiens unknown protein. 30 8.0
AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein. 30 8.0
AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein. 30 8.0
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 36.3 bits (80), Expect = 0.092
Identities = 24/79 (30%), Positives = 38/79 (48%)
Frame = -1
Query: 310 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPA 131
T PG S+ T T S +TP++++ + V + + F + ++ +TP
Sbjct: 313 TSHSTPGFTSSITTTE---TTSESTPSLSSSTIYSTVSTSTTAITSHFTT--SETAVTPT 367
Query: 130 PEVPSELSVRAPSASLRTL 74
P PS LS P+ SLRTL
Sbjct: 368 PVTPSSLSTDIPTTSLRTL 386
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 36.3 bits (80), Expect = 0.092
Identities = 24/79 (30%), Positives = 38/79 (48%)
Frame = -1
Query: 310 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPA 131
T PG S+ T T S +TP++++ + V + + F + ++ +TP
Sbjct: 313 TSHSTPGFTSSITTTE---TTSESTPSLSSSTIYSTVSTSTTAITSHFTT--SETAVTPT 367
Query: 130 PEVPSELSVRAPSASLRTL 74
P PS LS P+ SLRTL
Sbjct: 368 PVTPSSLSTDIPTTSLRTL 386
>BC001940-1|AAH01940.2| 748|Homo sapiens hypothetical protein
DKFZp762E1312 protein.
Length = 748
Score = 31.1 bits (67), Expect = 3.4
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1
Query: 277 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 185
VR+TP P S A+PAV AP +C + K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202
>AK074809-1|BAC11221.1| 748|Homo sapiens protein ( Homo sapiens
cDNA FLJ90328 fis, clone NT2RP2001921. ).
Length = 748
Score = 31.1 bits (67), Expect = 3.4
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1
Query: 277 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 185
VR+TP P S A+PAV AP +C + K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202
>AB162218-1|BAD36741.1| 748|Homo sapiens hFLEG1 protein.
Length = 748
Score = 31.1 bits (67), Expect = 3.4
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1
Query: 277 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 185
VR+TP P S A+PAV AP +C + K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202
>BC065530-1|AAH65530.1| 1003|Homo sapiens methyl-CpG binding domain
protein 6 protein.
Length = 1003
Score = 30.7 bits (66), Expect = 4.6
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Frame = -1
Query: 325 LPAAVTLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLS---LP 155
+P L+ PG L P P ++S A P +A P + +P+ S LP
Sbjct: 151 VPPTTPLNGGPGS-----LPPEPPSVSQAFPTLAGPGGLFPPRLADPVPSGGSSSPRFLP 205
Query: 154 AKGTLTPAPEVPSELSVRAPS----ASLRTLELVNSSGS 50
+PAP P +S+ APS A+LR+ + + GS
Sbjct: 206 RGNAPSPAPPPPPAISLNAPSYNWGAALRSSLVPSDLGS 244
>AK056399-1|BAB71176.1| 1003|Homo sapiens protein ( Homo sapiens
cDNA FLJ31837 fis, clone NT2RP7000069, weakly similar to
MUCIN 1 PRECURSOR. ).
Length = 1003
Score = 30.7 bits (66), Expect = 4.6
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Frame = -1
Query: 325 LPAAVTLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLS---LP 155
+P L+ PG L P P ++S A P +A P + +P+ S LP
Sbjct: 151 VPPTTPLNGGPGS-----LPPEPPSVSQAFPTLAGPGGLFPPRLADPVPSGGSSSPRFLP 205
Query: 154 AKGTLTPAPEVPSELSVRAPS----ASLRTLELVNSSGS 50
+PAP P +S+ APS A+LR+ + + GS
Sbjct: 206 RGNAPSPAPPPPPAISLNAPSYNWGAALRSSLVPSDLGS 244
>AB067474-1|BAB67780.1| 967|Homo sapiens KIAA1887 protein protein.
Length = 967
Score = 30.7 bits (66), Expect = 4.6
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Frame = -1
Query: 325 LPAAVTLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLS---LP 155
+P L+ PG L P P ++S A P +A P + +P+ S LP
Sbjct: 115 VPPTTPLNGGPGS-----LPPEPPSVSQAFPTLAGPGGLFPPRLADPVPSGGSSSPRFLP 169
Query: 154 AKGTLTPAPEVPSELSVRAPS----ASLRTLELVNSSGS 50
+PAP P +S+ APS A+LR+ + + GS
Sbjct: 170 RGNAPSPAPPPPPAISLNAPSYNWGAALRSSLVPSDLGS 208
>AF179681-1|AAF72107.1| 1156|Homo sapiens unknown protein.
Length = 1156
Score = 29.9 bits (64), Expect = 8.0
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -1
Query: 259 PFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKG-TLTPAPEVPSELSVRAPSASL 83
P T TP + PSF V + PI++ + P TL P P + + P S
Sbjct: 492 PLTSDPPTPPSSTPSFKPPVTRESPISMCVDSPPPLSFLTLLPVPSTGTSVITSKPMNST 551
Query: 82 RTLELVNSSGSS 47
+ V ++ S+
Sbjct: 552 SVISTVTTNASA 563
>AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein.
Length = 877
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 142 LTPAPEVPSELSVRAPSASLRTL 74
+TP P PS LS P+ SLRTL
Sbjct: 24 VTPTPVTPSSLSTDIPTTSLRTL 46
>AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 142 LTPAPEVPSELSVRAPSASLRTL 74
+TP P PS LS P+ SLRTL
Sbjct: 24 VTPTPVTPSSLSTDIPTTSLRTL 46
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,160,096
Number of Sequences: 237096
Number of extensions: 2182610
Number of successful extensions: 5556
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5553
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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