Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_I18
         (593 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   5.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.8  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = -2

Query: 337 IANPDPFFSQPSNGPSGNYEPISTGPAFVDFN 242
           I NP P  + PSN  +      S  P   D N
Sbjct: 416 IINPQPQITSPSNTNTSTSSTNSNKPNSSDLN 447


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 470 CRIRHEETTLTLFDNESFRVFLLR 399
           C   HE+ T  ++DNE    F  R
Sbjct: 803 CDFLHEDNTTLVWDNEQQVPFAYR 826


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = -1

Query: 566  HSTISSHALPA*KYSEYXIDELHFHRATISPSCRIRHEETTLTLFDN 426
            H  +++H       +EY    L     TI+P+  I  E+T   +  N
Sbjct: 1561 HLRVTAHNNAGFNVAEYEFATLTVTGGTIAPAREIPKEDTFQIILAN 1607


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 503 VHLYXIHYIFKLEER 547
           ++LY I+Y FK  ER
Sbjct: 120 INLYTINYNFKESER 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,925
Number of Sequences: 336
Number of extensions: 2630
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)