Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_I17
         (292 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93386-1|CAB07645.1|  442|Caenorhabditis elegans Hypothetical pr...    31   0.10 
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical...    30   0.32 
U55376-1|AAA98003.1|  434|Caenorhabditis elegans Hypothetical pr...    28   0.97 
U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical pr...    28   1.3  
AF016425-6|AAY86242.1|  104|Caenorhabditis elegans Hypothetical ...    27   1.7  
AC024856-1|ABB51172.1|  334|Caenorhabditis elegans Hypothetical ...    27   2.2  
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr...    26   3.9  
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr...    26   3.9  
U28944-18|AAA68375.2|  246|Caenorhabditis elegans Helix loop hel...    26   3.9  
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ...    26   3.9  
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei...    26   3.9  
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    25   6.8  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    25   6.8  
AL132847-2|CAB63372.1|  343|Caenorhabditis elegans Hypothetical ...    25   9.1  
AL023811-1|CAA19422.2|  947|Caenorhabditis elegans Hypothetical ...    25   9.1  

>Z93386-1|CAB07645.1|  442|Caenorhabditis elegans Hypothetical
           protein R11H6.2 protein.
          Length = 442

 Score = 31.5 bits (68), Expect = 0.10
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -1

Query: 193 TGGTIRVDSESTRLPAHPRVSPLLRLILILFDVVTRLFNKHVTAVDADQE 44
           TGG  + DS  T LP H  +S L+ LI +++  +    N  +  +  D E
Sbjct: 301 TGGVTKDDSFVTPLPVHSLISLLIWLICLVYASIRNSSNTSLGKITGDNE 350


>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
           protein B0511.12 protein.
          Length = 1634

 Score = 29.9 bits (64), Expect = 0.32
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -1

Query: 139 RVSPLLRLILILFDVVTRLFNKHVTAVDADQE 44
           R+S    L++ILFD++T  F KH+ +   D++
Sbjct: 416 RMSSNQNLMVILFDIITSPFRKHLDSEQEDED 447


>U55376-1|AAA98003.1|  434|Caenorhabditis elegans Hypothetical
           protein F16H11.3 protein.
          Length = 434

 Score = 28.3 bits (60), Expect = 0.97
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 252 EPRALSLWFSLPVMGTLTIAPEVPSELI 169
           +P  +  W+S   MG+LTIA ++P+  I
Sbjct: 57  KPDGVETWYSKEFMGSLTIASQLPNASI 84


>U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical protein
            B0416.1 protein.
          Length = 1203

 Score = 27.9 bits (59), Expect = 1.3
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -1

Query: 238  ELVVFIASYGYLDHSTGGTIRVDSESTRLPAHPRVSPLLRLILIL 104
            + V  + S   +DHSTG     DSEST     P++S   R ++ +
Sbjct: 876  QFVPSLGSVSEVDHSTGEEQSSDSESTTSSLPPKLSLRQRFLVCI 920


>AF016425-6|AAY86242.1|  104|Caenorhabditis elegans Hypothetical
           protein F59A7.11 protein.
          Length = 104

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = +2

Query: 32  LVSVLLVGVNSRYVLVEEPGYYIEQYEDQPEQWANSRVRRQAGALTINSDGTS 190
           L++ LL  +    V+   PG   +  ED  +     R RR  G  T+ +DG++
Sbjct: 4   LINSLLFTIAILAVVWGYPGQQADHVEDLTKNRNEPRARRDLGTETVRADGSA 56


>AC024856-1|ABB51172.1|  334|Caenorhabditis elegans Hypothetical
           protein Y71G10AR.4 protein.
          Length = 334

 Score = 27.1 bits (57), Expect = 2.2
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = -2

Query: 273 IWLVRSTEPRALSLWFSLPVMGTLTIA 193
           +W+VRS E R L+++F + V+  +++A
Sbjct: 169 VWVVRSKESRRLTVYFVISVVVLISMA 195


>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
            W02B9.1b protein.
          Length = 2920

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 17/64 (26%), Positives = 29/64 (45%)
 Frame = -1

Query: 232  VVFIASYGYLDHSTGGTIRVDSESTRLPAHPRVSPLLRLILILFDVVTRLFNKHVTAVDA 53
            +V IAS G  + +T   I ++  +   P   +      +I    D+   LFN H T  D 
Sbjct: 1407 LVLIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQ 1466

Query: 52   DQEN 41
            D+++
Sbjct: 1467 DEKS 1470


>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
            W02B9.1b protein.
          Length = 2920

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 17/64 (26%), Positives = 29/64 (45%)
 Frame = -1

Query: 232  VVFIASYGYLDHSTGGTIRVDSESTRLPAHPRVSPLLRLILILFDVVTRLFNKHVTAVDA 53
            +V IAS G  + +T   I ++  +   P   +      +I    D+   LFN H T  D 
Sbjct: 1407 LVLIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQ 1466

Query: 52   DQEN 41
            D+++
Sbjct: 1467 DEKS 1470


>U28944-18|AAA68375.2|  246|Caenorhabditis elegans Helix loop helix
           protein 14 protein.
          Length = 246

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +3

Query: 69  TCLLKSLVTTSNSMRISRSSGLTRGCAGKRVLSLSTLMVPPVLWSR 206
           +C +  + T+S S  +   +         R + +STL+VPP+  SR
Sbjct: 15  SCKIFQICTSSQSFDLELFNSSLYNLVPIRFVPISTLLVPPIRLSR 60


>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
            protein W02B9.1b protein.
          Length = 2920

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 17/64 (26%), Positives = 29/64 (45%)
 Frame = -1

Query: 232  VVFIASYGYLDHSTGGTIRVDSESTRLPAHPRVSPLLRLILILFDVVTRLFNKHVTAVDA 53
            +V IAS G  + +T   I ++  +   P   +      +I    D+   LFN H T  D 
Sbjct: 1407 LVLIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQ 1466

Query: 52   DQEN 41
            D+++
Sbjct: 1467 DEKS 1470


>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
            protein.
          Length = 2920

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 17/64 (26%), Positives = 29/64 (45%)
 Frame = -1

Query: 232  VVFIASYGYLDHSTGGTIRVDSESTRLPAHPRVSPLLRLILILFDVVTRLFNKHVTAVDA 53
            +V IAS G  + +T   I ++  +   P   +      +I    D+   LFN H T  D 
Sbjct: 1407 LVLIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQ 1466

Query: 52   DQEN 41
            D+++
Sbjct: 1467 DEKS 1470


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 144  CAGKRVLSLSTLMVPPVLWSRYP*LAMKTT 233
            C G RVL      VPP+ W+  P  A   T
Sbjct: 1353 CDGPRVLQKLQADVPPIRWATGPWTACSAT 1382


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 144  CAGKRVLSLSTLMVPPVLWSRYP*LAMKTT 233
            C G RVL      VPP+ W+  P  A   T
Sbjct: 1353 CDGPRVLQKLQADVPPIRWATGPWTACSAT 1382


>AL132847-2|CAB63372.1|  343|Caenorhabditis elegans Hypothetical
           protein Y48G10A.3 protein.
          Length = 343

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 152 QAGALTINSDGTSGAMVKVPI 214
           Q   L I+ DGT+G  +KVP+
Sbjct: 233 QRTPLPISRDGTTGVQLKVPV 253


>AL023811-1|CAA19422.2|  947|Caenorhabditis elegans Hypothetical
           protein C51F7.1 protein.
          Length = 947

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +2

Query: 110 EDQPEQWANSRVRRQAGALTINSDGTSGAMVKVPITGNEN 229
           + Q E W N  V       + N  GT+G  VK   +GN N
Sbjct: 620 DSQNEMWLNQPVE------SFNGGGTAGRFVKKNSSGNRN 653


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,080,275
Number of Sequences: 27780
Number of extensions: 103591
Number of successful extensions: 303
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 303
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 280685548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)