Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_I16
(245 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo... 27 0.26
SPAC1002.16c |||nicotinic acid plasma membrane transporter |Schi... 25 1.1
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 25 1.8
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 25 1.8
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 24 2.4
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 24 2.4
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 24 3.2
SPBC1773.04 |||flavonol reductase/cinnamoyl-CoA reductase family... 23 4.3
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 23 4.3
SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm type|Schizos... 23 4.3
SPBC16H5.11c |skb1|rmt5|type II protein arginine N-methyltransfe... 23 5.6
SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces... 23 5.6
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 23 5.6
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 23 5.6
SPCC191.06 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 23 7.4
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 23 7.4
SPBC21C3.05 |sap62||zinc finger protein Sap62|Schizosaccharomyce... 23 7.4
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 22 9.8
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 22 9.8
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 22 9.8
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 22 9.8
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 22 9.8
>SPBC800.09 |sum2||G2/M transition checkpoint protein
Sum2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 27.5 bits (58), Expect = 0.26
Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +3
Query: 93 PALFV--GGLPLSQRLDWSYPSYPTY 164
PA FV GGLPL LD S P+ P Y
Sbjct: 144 PAQFVPPGGLPLGTPLDASTPAVPYY 169
>SPAC1002.16c |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 499
Score = 25.4 bits (53), Expect = 1.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 19 FCREKNVYFDLSFFFNLIWRRIELAPR 99
FC E ++ L+ + +I+ R+ELAPR
Sbjct: 159 FC-EAGLFPCLALYLTMIYSRVELAPR 184
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 24.6 bits (51), Expect = 1.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 146 VRPVESLREWESTDKERGASSIRLQIKLKKNDKSK 42
+RP+ S + + K+R A I L+ +LKK SK
Sbjct: 813 LRPLLSSTQNDKQLKKRDAEIIELKYELKKQQNSK 847
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 24.6 bits (51), Expect = 1.8
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 124 RNDSTGLTP-PTPLIEQITFFPGSYFNYFNYNFQSSTL 234
R DS L PTP +EQ+ P + + Y F S+TL
Sbjct: 449 RTDSLDLQSLPTPTLEQLESVPFNRYGYVRI-FPSTTL 485
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 24.2 bits (50), Expect = 2.4
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 148 PPTPLIEQITFFPGSYFNYFNYNFQSSTLFNN 243
PP P+ E T+ P NY + LF+N
Sbjct: 1528 PPMPITEDQTYVPSRVINYVVHT--QKALFSN 1557
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1379
Score = 24.2 bits (50), Expect = 2.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 119 WESTDKERGASSIRLQIKLKKNDKSK*TFFSRQKKKK 9
W S+ K G RL+ KL+K +K FF ++KKK+
Sbjct: 1323 WLSS-KRMGDMLWRLE-KLQKKTDNKKPFFKKKKKKR 1357
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 23.8 bits (49), Expect = 3.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 146 VRPVESLREWESTDKERGASSIRLQIKLKKNDK 48
VR V+S E +++D RLQ++LKK+ +
Sbjct: 315 VRDVQSAIELDASDANLRQELRRLQLELKKSKR 347
>SPBC1773.04 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 336
Score = 23.4 bits (48), Expect = 4.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 34 NVYFDLSFFFNLIWRRIELAPRS 102
N+ F FF+ LI R E+AP S
Sbjct: 211 NLNFSTWFFWQLIKGRYEVAPES 233
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 23.4 bits (48), Expect = 4.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 61 FNLIWRRIELAPRSLSVDSHSRNDSTGLTP 150
F++ WRR + P DS +RN TP
Sbjct: 784 FSMGWRRFQSIPVYSISDSRTRNRMLKYTP 813
>SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 23.4 bits (48), Expect = 4.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 112 PPTKSAGRVRFVSRLN*KKMINQ 44
PP K G V+FV+R + + INQ
Sbjct: 335 PPGKGCGFVQFVNRQSAEIAINQ 357
>SPBC16H5.11c |skb1|rmt5|type II protein arginine
N-methyltransferase Skb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 645
Score = 23.0 bits (47), Expect = 5.6
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 85 ELAPRSLSVDSHSRNDSTGLTPPTPLIEQIT 177
EL+P L H ++ TG+ P+ I +T
Sbjct: 431 ELSPECLDGVQHVLDEETGICIPSSYISYVT 461
>SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 476
Score = 23.0 bits (47), Expect = 5.6
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 1 RVFFFFFCREKNVYFDLSFFFNLIWRRIELAPRSLSVDSHSRNDSTGLTPPTPLIEQITF 180
RVF + F E+ + SFF+ L R P L S+ R + + PP P + + F
Sbjct: 105 RVFLYHFLNEEKEFTLASFFWGLC--RFVFFPVLL---SYKRRE---MLPPQPSVRRPRF 156
Query: 181 F 183
+
Sbjct: 157 Y 157
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 23.0 bits (47), Expect = 5.6
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 146 VRPVESLREWESTDKERGASSIRLQ 72
VRP+ + R+ +S+ KER ++ L+
Sbjct: 1556 VRPIAASRDAKSSSKERERGTLALE 1580
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 23.0 bits (47), Expect = 5.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 117 PLSQRLDWSYPSYPTYRTNYFFSWII 194
P SQ L P+YPT+R + F II
Sbjct: 189 PNSQPLQSITPNYPTHREDKFDLLII 214
>SPCC191.06 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 138
Score = 22.6 bits (46), Expect = 7.4
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +1
Query: 151 PTPLIEQITFFPGSYFNYFNYNFQSSTLFN 240
P P+ +++ YF YF + + +FN
Sbjct: 73 PIPVFQRLLHSNDIYFPYFQTRYTTLIMFN 102
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 22.6 bits (46), Expect = 7.4
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 126 QRLDWSYPSYPTYRTNYFFSWI 191
+R+ +S S+PTY + F W+
Sbjct: 471 KRIKYSKISHPTYTESVSFLWL 492
>SPBC21C3.05 |sap62||zinc finger protein Sap62|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 217
Score = 22.6 bits (46), Expect = 7.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 138 WSYPSYPTYRTNYFFS 185
WSY PTY +F++
Sbjct: 197 WSYWDAPTYTIQFFYN 212
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 22.2 bits (45), Expect = 9.8
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 91 APRSLSVDSHSRNDSTGLTPPTPLIEQITFFPGSYFNYFNYNFQSS 228
A L + S N + LIE+ GSY N +++F+SS
Sbjct: 1648 ADEDLEIIGSSDNKAIDSNGEGFLIEKDNIGTGSYSNQQSFDFKSS 1693
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 22.2 bits (45), Expect = 9.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -1
Query: 155 VGGVRPVESLREWESTDKERGASSIRLQIKLKKNDKSK*TFFSRQKKK 12
V R ESL + S ++ + SI +KL K K F+S ++K
Sbjct: 1426 VTSTRQKESLSKIFSDSEDCNSESIHYVLKLVKPSKFFPLFYSDSEEK 1473
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 22.2 bits (45), Expect = 9.8
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -1
Query: 134 ESLREWESTDKERGASSIRLQIKLKKNDK 48
+ LRE E D+E ++ R++I+ +++K
Sbjct: 335 DKLREIEKNDEEHERAAKRIKIQPSEDEK 363
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 22.2 bits (45), Expect = 9.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 143 RPVESLREWESTDKERGASSIRLQIKLKKNDKSK 42
R VES + WE T R + K KKN+ K
Sbjct: 167 RRVESEKVWEETRDNRVGNWQDFLHKTKKNNLKK 200
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 22.2 bits (45), Expect = 9.8
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 93 PALFVGGLPLSQRLDWSYPSYPTYRTNYF 179
P+L +PL + + SY ++P + N F
Sbjct: 2100 PSLIYQDIPLFFKAEESYFNFPAVKANAF 2128
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 879,582
Number of Sequences: 5004
Number of extensions: 14346
Number of successful extensions: 58
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 2,362,478
effective HSP length: 60
effective length of database: 2,062,238
effective search space used: 43306998
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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