Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_I16
(245 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical pr... 28 1.0
AF016449-2|AAG24006.1| 333|Caenorhabditis elegans Seven tm rece... 27 2.3
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 26 4.1
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 26 4.1
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 26 4.1
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 26 4.1
AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical ... 26 4.1
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical pr... 25 5.4
X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein ... 25 5.4
U51995-6|AAA96074.1| 430|Caenorhabditis elegans Hypothetical pr... 25 5.4
U28738-12|AAK68400.1| 189|Caenorhabditis elegans Sr protein (sp... 25 5.4
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 25 5.4
AL132904-11|CAC35844.1| 380|Caenorhabditis elegans Hypothetical... 25 5.4
AF049709-1|AAC36062.1| 380|Caenorhabditis elegans tyrosylprotei... 25 5.4
U41017-8|AAC48210.1| 233|Caenorhabditis elegans T box family pr... 25 7.1
Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical pr... 25 9.4
U49830-10|AAL16312.1| 463|Caenorhabditis elegans Hypothetical p... 25 9.4
AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical... 25 9.4
AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical... 25 9.4
>Z68119-7|CAA92193.2| 360|Caenorhabditis elegans Hypothetical
protein T18D3.3 protein.
Length = 360
Score = 27.9 bits (59), Expect = 1.0
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -1
Query: 179 KVICSISGVGGVRPVESLREWESTDKERGASSIRLQIKLKKNDKS 45
KV S+ + GV+ V LR W T ++ A S+ L+I +S
Sbjct: 277 KVFSSLEDIEGVKKVHDLRIWSLT-MDKIALSVHLEIDANSQSQS 320
>Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical protein
F42E11.1 protein.
Length = 1266
Score = 27.9 bits (59), Expect = 1.0
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +1
Query: 34 NVYFDLSFFFNLIWRRIELAPRSLSVDSHSRNDSTGLTPPTPLIEQITFFPGSYFNYFNY 213
+V S+F + RI + ++ D+ GLT TP I G YF Y N
Sbjct: 980 SVMMAASYFPEYVRARISAGIMFTMIRQKAKIDNRGLTGETPDIRGDISMKGVYFAYPNR 1039
Query: 214 NFQ 222
N Q
Sbjct: 1040 NRQ 1042
>AF016449-2|AAG24006.1| 333|Caenorhabditis elegans Seven tm
receptor protein 244 protein.
Length = 333
Score = 26.6 bits (56), Expect = 2.3
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +1
Query: 25 REKNVYFDLSFFFNLIWRRIELAPRSLSVDSHSRNDSTGLTPPTPLIEQITFFPGSYFNY 204
R+ ++F + F+ ++W + L S ++ + T L + +IT+F FNY
Sbjct: 127 RKLAIWFIIPIFYGILWSSLLLIFFRPSQETDAILKETYLLERNSTLSEITYFG---FNY 183
Query: 205 FNYNFQSSTLFN 240
+ N Q + N
Sbjct: 184 WIQNDQGREVLN 195
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 25.8 bits (54), Expect = 4.1
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 19 FCREKNVYFDLSFFFNLIWRRIELAPRSLSVDSHSRNDSTGLTP 150
FC ++ F+L +F N IE+A RS S S S ND +P
Sbjct: 115 FCSDR---FNL-YFINRKKENIEVAARSSSPTSKSENDQGSSSP 154
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 25.8 bits (54), Expect = 4.1
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 19 FCREKNVYFDLSFFFNLIWRRIELAPRSLSVDSHSRNDSTGLTP 150
FC ++ F+L +F N IE+A RS S S S ND +P
Sbjct: 406 FCSDR---FNL-YFINRKKENIEVAARSSSPTSKSENDQGSSSP 445
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 25.8 bits (54), Expect = 4.1
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 19 FCREKNVYFDLSFFFNLIWRRIELAPRSLSVDSHSRNDSTGLTP 150
FC ++ F+L +F N IE+A RS S S S ND +P
Sbjct: 421 FCSDR---FNL-YFINRKKENIEVAARSSSPTSKSENDQGSSSP 460
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 25.8 bits (54), Expect = 4.1
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 19 FCREKNVYFDLSFFFNLIWRRIELAPRSLSVDSHSRNDSTGLTP 150
FC ++ F+L +F N IE+A RS S S S ND +P
Sbjct: 421 FCSDR---FNL-YFINRKKENIEVAARSSSPTSKSENDQGSSSP 460
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 25.8 bits (54), Expect = 4.1
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 19 FCREKNVYFDLSFFFNLIWRRIELAPRSLSVDSHSRNDSTGLTP 150
FC ++ F+L +F N IE+A RS S S S ND +P
Sbjct: 115 FCSDR---FNL-YFINRKKENIEVAARSSSPTSKSENDQGSSSP 154
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 25.8 bits (54), Expect = 4.1
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 19 FCREKNVYFDLSFFFNLIWRRIELAPRSLSVDSHSRNDSTGLTP 150
FC ++ F+L +F N IE+A RS S S S ND +P
Sbjct: 406 FCSDR---FNL-YFINRKKENIEVAARSSSPTSKSENDQGSSSP 445
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 25.8 bits (54), Expect = 4.1
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 19 FCREKNVYFDLSFFFNLIWRRIELAPRSLSVDSHSRNDSTGLTP 150
FC ++ F+L +F N IE+A RS S S S ND +P
Sbjct: 421 FCSDR---FNL-YFINRKKENIEVAARSSSPTSKSENDQGSSSP 460
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 25.8 bits (54), Expect = 4.1
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 19 FCREKNVYFDLSFFFNLIWRRIELAPRSLSVDSHSRNDSTGLTP 150
FC ++ F+L +F N IE+A RS S S S ND +P
Sbjct: 421 FCSDR---FNL-YFINRKKENIEVAARSSSPTSKSENDQGSSSP 460
>AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical
protein Y55F3BL.2 protein.
Length = 462
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 163 IEQITFFPGSYFNYFNYNFQSSTLFNN 243
+E+ FF YF +FN FQ + +N
Sbjct: 54 VEKTLFFTKQYFKFFNEKFQFFSNLSN 80
>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical
protein F54E4.1 protein.
Length = 2948
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 7 FFFFFCREKNVYFD 48
F FFFCR +YFD
Sbjct: 6 FIFFFCRNGFLYFD 19
>Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical
protein ZK930.1 protein.
Length = 1354
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 23 VAKKTFILIYHFFLI*SGDESNSPRALC 106
V K+ IL+YHFF I G++ R LC
Sbjct: 555 VESKSLILLYHFF-IKIGNDDTLLRFLC 581
>Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical protein
ZK455.7 protein.
Length = 1268
Score = 25.4 bits (53), Expect = 5.4
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = +1
Query: 34 NVYFDLSFFFNLIWRRIELAPRSLSVDSHSRNDSTGLTPPTPLIEQITFFPGSYFNYFN 210
+V S+F + RI + S D+ GLT TP I+ G YF Y N
Sbjct: 982 SVMLAASYFPEYVRARISAGIMFTMIRQKSVIDNRGLTGDTPTIKGNINMRGVYFAYPN 1040
>Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical protein
ZK455.7 protein.
Length = 1268
Score = 25.4 bits (53), Expect = 5.4
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = +1
Query: 34 NVYFDLSFFFNLIWRRIELAPRSLSVDSHSRNDSTGLTPPTPLIEQITFFPGSYFNYFN 210
+V S+F + RI + S D+ GLT TP I+ G YF Y N
Sbjct: 982 SVMLAASYFPEYVRARISAGIMFTMIRQKSVIDNRGLTGDTPTIKGNINMRGVYFAYPN 1040
>X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein C
protein.
Length = 1254
Score = 25.4 bits (53), Expect = 5.4
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = +1
Query: 34 NVYFDLSFFFNLIWRRIELAPRSLSVDSHSRNDSTGLTPPTPLIEQITFFPGSYFNYFN 210
+V S+F + RI + S D+ GLT TP I+ G YF Y N
Sbjct: 968 SVMLAASYFPEYVRARISAGIMFTMIRQKSVIDNRGLTGDTPTIKGNINMRGVYFAYPN 1026
>U51995-6|AAA96074.1| 430|Caenorhabditis elegans Hypothetical
protein F07G6.3 protein.
Length = 430
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 13 FFFCREKNVYFDLSFFFNLIWRRIELAPRSLSVD-SHSRND 132
+F REK + ++ F L+ IEL+ +S +D H+ ND
Sbjct: 169 WFQDREKVIAERETYIFELLKSNIELSIKSYGIDKEHTEND 209
>U28738-12|AAK68400.1| 189|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform c protein.
Length = 189
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 133 SRCESGSPPTKSAGRVRFVSR 71
SR SGSPP R R VSR
Sbjct: 145 SRTRSGSPPKNGGDRKRSVSR 165
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 133 SRCESGSPPTKSAGRVRFVSR 71
SR SGSPP R R VSR
Sbjct: 164 SRTRSGSPPKNGGDRKRSVSR 184
>AL132904-11|CAC35844.1| 380|Caenorhabditis elegans Hypothetical
protein Y111B2A.15 protein.
Length = 380
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 81 NRTRPALFVGGLPLS 125
NRT P +F+GG+P S
Sbjct: 66 NRTSPFIFIGGVPRS 80
>AF049709-1|AAC36062.1| 380|Caenorhabditis elegans tyrosylprotein
sulfotransferase-A protein.
Length = 380
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 81 NRTRPALFVGGLPLS 125
NRT P +F+GG+P S
Sbjct: 66 NRTSPFIFIGGVPRS 80
>U41017-8|AAC48210.1| 233|Caenorhabditis elegans T box family
protein 41 protein.
Length = 233
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 130 DSTGLTPPTPLIEQITFFPGSYFNYFNYNFQSSTLFNN 243
D+ L PP P ++ + FP N +Y F T +N
Sbjct: 155 DTASLIPPIPSVQPLPLFPLPQ-NSMSYTFSYDTYPSN 191
>Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical
protein R07E5.2 protein.
Length = 226
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 83 SNSPRALCRWTPTLAT 130
S++ RALCR PT+AT
Sbjct: 3 SSAVRALCRTVPTVAT 18
>U49830-10|AAL16312.1| 463|Caenorhabditis elegans Hypothetical
protein C33F10.8 protein.
Length = 463
Score = 24.6 bits (51), Expect = 9.4
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 116 ESTDKERGASSIRLQIKLKKNDKSK*TFFSRQKKKKN 6
+S K++G+ R K KKN SK KKKKN
Sbjct: 27 DSKKKDQGSRKARGNSK-KKNHSSKKVVRKTSKKKKN 62
>AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical
protein Y75B8A.26 protein.
Length = 1144
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = +1
Query: 61 FNLIWRRIELAPRSLSVDSHSRNDSTGLTPPTPLIE 168
F +W E + ++ D + + +TPP P++E
Sbjct: 470 FGRLWSECENSDEDVA-DEEAESSEASVTPPVPVLE 504
>AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical
protein K07H8.1 protein.
Length = 493
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 13 FFFCREKNVYFDLSFFFNLIWRRIELAPR 99
F CRE N+Y +L + + + + +E PR
Sbjct: 141 FILCRELNLYGNLLYKWKTVRQILEYFPR 169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,853,087
Number of Sequences: 27780
Number of extensions: 78529
Number of successful extensions: 323
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 323
length of database: 12,740,198
effective HSP length: 61
effective length of database: 11,045,618
effective search space used: 220912360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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