Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_I15
         (711 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4XHQ8 Cluster: Putative uncharacterized protein; n=1; ...    35   2.3  
UniRef50_Q9GMU9 Cluster: Putative uncharacterized protein; n=1; ...    34   4.0  

>UniRef50_A4XHQ8 Cluster: Putative uncharacterized protein; n=1;
           Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
           Putative uncharacterized protein - Caldicellulosiruptor
           saccharolyticus (strain ATCC 43494 / DSM 8903)
          Length = 288

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +1

Query: 100 SNINHIIYNGCPQNITFIDIIYHYNVLMTSYLSHFVTRVIMK*Y 231
           S I + I+     +I F+D  YH N+ +  YL+++V R I++ Y
Sbjct: 72  SRIYNYIHRQRSNSIVFLDKYYHTNIYINCYLTYYVLRSILRKY 115


>UniRef50_Q9GMU9 Cluster: Putative uncharacterized protein; n=1;
           Macaca fascicularis|Rep: Putative uncharacterized
           protein - Macaca fascicularis (Crab eating macaque)
           (Cynomolgus monkey)
          Length = 133

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
 Frame = -1

Query: 657 VKLS*NLTMPQVKLGVWKPQSVYTHNHRTVL-----IYMFIMLLLCMLFSSND*FT*IRI 493
           V  S  + +P     V KP+S+YT +HR VL     +   +MLLL +   S + F+   +
Sbjct: 16  VMFSEMIFLPNCGFQVCKPKSLYTLSHRIVLRLQYRVLSLLMLLLLLFIKSQNFFSNPNV 75

Query: 492 ---TYNKLINCST*ILAQKYNIINNL 424
               + KL  C+T      +N+++ L
Sbjct: 76  YLFPFLKLYQCNTSYPVDPFNMLSPL 101


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,291,785
Number of Sequences: 1657284
Number of extensions: 8215911
Number of successful extensions: 15927
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15922
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)