Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_I15
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    21   7.5  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    21   7.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.9  

>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 343 CNNHNKVDIFKYTNIIIMD 287
           CN+H KV + K    +I +
Sbjct: 75  CNDHQKVSVEKVIRFLIKE 93


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 343 CNNHNKVDIFKYTNIIIMD 287
           CN+H KV + K    +I +
Sbjct: 75  CNDHQKVSVEKVIRFLIKE 93


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 564 IYMFIMLLLCMLF 526
           IYMF+ +  C+LF
Sbjct: 298 IYMFVSVWKCLLF 310


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 564 IYMFIMLLLCMLF 526
           IYMF+ +  C+LF
Sbjct: 298 IYMFVSVWKCLLF 310


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 564 IYMFIMLLLCMLF 526
           IYMF+ +  C+LF
Sbjct: 298 IYMFVSVWKCLLF 310


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 564 IYMFIMLLLCMLF 526
           IYMF+ +  C+LF
Sbjct: 298 IYMFVSVWKCLLF 310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,313
Number of Sequences: 336
Number of extensions: 2766
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)