Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_I14
         (473 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    44   5e-07
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    24   0.62 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   3.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   3.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   7.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   7.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 44.4 bits (100), Expect = 5e-07
 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
 Frame = +3

Query: 54   QDVTIPCKVTGLPAPKVVWSHNAKPL--SGGRATVSDSGLVIKGVQKGDTGYYGCRATNE 227
            +DVT+PC   GLP P + W         S       D  L I+ V + + G Y C   N+
Sbjct: 1322 EDVTLPCLAVGLPPPVITWKIKGVQFTTSDKIRQQPDGSLFIRDVSRNNAGEYSCHVEND 1381

Query: 228  HGDKYFETLLQVN 266
            +G       L VN
Sbjct: 1382 YGQDSVTHQLIVN 1394



 Score = 39.5 bits (88), Expect = 2e-05
 Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
 Frame = +3

Query: 51  GQDVTIPCKVTGLPAPKVVWSHNAKPLSGGR----------ATVSDSGLVIKGVQKGDTG 200
           G D  + CK  G P P V W   A  +S G             V D  L I  +QK + G
Sbjct: 713 GSDAAVECKADGFPRPVVTWKR-ATGVSPGDYKDFKPNNPDIKVEDGTLTINNIQKTNEG 771

Query: 201 YYGCRATNEHG 233
           YY C A N  G
Sbjct: 772 YYLCEAVNGIG 782



 Score = 31.9 bits (69), Expect = 0.003
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
 Frame = +3

Query: 54  QDVTIPCKVTGLPAPKVVWSHNAKPLSGGRA-TVSD------SGLVIKGVQKGDTGYYGC 212
           Q+V + C   G P+P   W    +  +  +A T++D        L+I+  +  D+G Y C
Sbjct: 248 QNVALLCPAQGFPSPSFRWYKFVEGTTRKQAVTLNDRVKQVAGTLIIREAKVEDSGKYLC 307

Query: 213 RATNEHGDKYFETLLQV 263
              N  G +  ET+L V
Sbjct: 308 VVNNSVGGESVETVLTV 324



 Score = 30.7 bits (66), Expect = 0.007
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
 Frame = +3

Query: 45   KHGQDVTIPCKVTGLPAPKVVWSHNAK---PLSGGRATVSD--------SGLVIKGVQKG 191
            + G    + C+  G     ++W+ N K   P    R T+ +        SGL IK  ++ 
Sbjct: 809  RRGDPAVLQCEAKGEKPIGILWNINNKRLEPKGDNRYTIREEILANGVLSGLSIKRTERS 868

Query: 192  DTGYYGCRATNEHG 233
            D+  + C ATN  G
Sbjct: 869  DSALFTCVATNAFG 882



 Score = 30.3 bits (65), Expect = 0.009
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
 Frame = +3

Query: 42  VKHGQDVTIPCKVTGLPAPKVVWSHNAKPLS-------GGRATVSD---SGLVIKGVQKG 191
           V+ G  V + C  +G P P++ W    + LS       G   TV+    S L I  +   
Sbjct: 425 VQPGNSVFLKCIASGNPTPEITWELYGRRLSNSERNQIGQYVTVNGDVVSHLNITAIHTN 484

Query: 192 DTGYYGCRATNEHG 233
           D G Y C A+++ G
Sbjct: 485 DGGLYRCVASSKVG 498



 Score = 24.2 bits (50), Expect = 0.62
 Identities = 8/35 (22%), Positives = 15/35 (42%)
 Frame = +3

Query: 6   PKYEQKPEKVIVVKHGQDVTIPCKVTGLPAPKVVW 110
           P + ++P   I   +     + C   G P P ++W
Sbjct: 23  PVFVREPPNRIDFSNTTGAVVECSAHGNPTPDIIW 57


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.62
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 342 VFYRNAQLSFKSFTYFDSVIHVNLFS*LVEGSRSIY 235
           VFY N    F S      V+ + +FS  +  S  +Y
Sbjct: 69  VFYENVNFQFGSILALFGVVQIYIFSGFIVPSGVVY 104


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 338 FIETHNCHLSLLRILTVSF 282
           F+E    H S+L IL +SF
Sbjct: 148 FVELTVAHASVLTILAISF 166


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 338 FIETHNCHLSLLRILTVSF 282
           F+E    H S+L IL +SF
Sbjct: 148 FVELTVAHASVLTILAISF 166



 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 409 LYFITILFNYF 377
           LYF+TI+F +F
Sbjct: 236 LYFLTIIFLFF 246


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 344 QFFIETHNCHLSLLRILTV 288
           QF IE   C++SLL ++ +
Sbjct: 273 QFNIEMFLCNMSLLTVIPI 291


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 412 FLYFITILFNYFFRLQYNLK 353
           F+ F+T++  YF  L   L+
Sbjct: 178 FIVFMTVILPYFINLLMELQ 197


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 412 FLYFITILFNYFFRLQYNLK 353
           F+ F+T++  YF  L   L+
Sbjct: 178 FIVFMTVILPYFINLLMELQ 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,399
Number of Sequences: 336
Number of extensions: 2130
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)