Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_I12
         (501 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   2.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   4.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   6.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.2  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   8.2  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 159 LVIRQLISECSCQSSTH 209
           L+I +LIS C C +S H
Sbjct: 203 LLIMRLISVCLCGASVH 219


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +1

Query: 379 VIEKLPRVSSFTE*SIVILSECTEYFSVAYV 471
           V+EK+   SSF    + +L +C +Y ++ ++
Sbjct: 73  VVEKILTQSSFECIHLSVLHKCYDYDAIPWL 103


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -2

Query: 413 VKLDTRGSFSMTIAVSWKGKHTA 345
           + LDT+ S+++T+A +  G+  A
Sbjct: 142 LNLDTKESYALTVAETADGRLNA 164


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 15/70 (21%), Positives = 26/70 (37%)
 Frame = -1

Query: 396 RQFFNDDRGKLEGQAYGTRVLGPAGDTSNFGGRLDWSNKNANAALDISKQIGGRPNLSAS 217
           ++F    R    G  Y  +  GP  D+ N   R     K + ++     +   RP  S  
Sbjct: 6   QEFGKRGRSTGRGLKYSGQQHGPQSDSRNQQLRTGEKRKRSTSSQSTEGENDARPRASQV 65

Query: 216 GAGVWNFDKN 187
              V++  K+
Sbjct: 66  KLNVFSIIKS 75


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 299 LPPKFEVSPAGPKTLV 346
           LPP F + P G   LV
Sbjct: 189 LPPSFGIFPGGAPPLV 204


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,943
Number of Sequences: 336
Number of extensions: 3118
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)