Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_I12
(501 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0625 - 21331209-21331273,21331364-21331555,21332348-213325... 31 0.52
12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387 30 0.91
02_04_0376 - 22474473-22476947 30 1.2
11_06_0295 + 22033367-22034947,22035030-22035137,22035230-220353... 29 1.6
07_03_1157 - 24419157-24419948 29 2.1
07_03_1155 - 24413270-24413728 29 2.1
03_01_0084 + 676538-676669,677828-677959,678085-678210,678820-67... 29 2.1
05_04_0374 - 20736615-20737037,20737148-20737639,20738145-207384... 29 2.8
09_06_0344 - 22419152-22419250,22419460-22419554,22419952-224201... 28 3.7
06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281 28 3.7
06_01_0682 + 5002036-5002573,5002875-5002966 28 3.7
11_01_0770 - 6447739-6448158 28 4.8
07_03_1425 + 26489446-26491425 28 4.8
04_03_0280 + 13854758-13855585 28 4.8
08_02_1426 + 27009720-27010787,27011846-27012517,27012999-270137... 27 6.4
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 27 6.4
07_03_0775 - 21413522-21413797,21414016-21414178,21414274-214143... 27 8.5
06_03_0821 - 25003001-25003336,25004248-25004376,25004984-250050... 27 8.5
06_03_0046 - 15852653-15854560 27 8.5
06_01_0680 + 4983054-4983080,4983243-4983590 27 8.5
06_01_0333 + 2404459-2404857,2404917-2405009,2405428-2405522,240... 27 8.5
02_03_0202 + 16359539-16359763,16360113-16360193,16361362-163616... 27 8.5
>12_02_0625 -
21331209-21331273,21331364-21331555,21332348-21332558,
21333600-21333700,21333839-21333844,21333956-21334051,
21334485-21334497
Length = 227
Score = 31.1 bits (67), Expect = 0.52
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 199 VPHTGSTCRQVWSSAYLLADIKGSVCILIRPIQP 300
VP TG+ +W SA+L AD+ GS +IRP +P
Sbjct: 25 VPATGALRVWIWDSAHLQADLLGSP--VIRPSEP 56
>12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387
Length = 487
Score = 30.3 bits (65), Expect = 0.91
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Frame = -1
Query: 399 TRQFFNDDRGKLEGQAYGTRVLGPAGDTSN---FGGRLDWSNKNANA---ALDISKQIGG 238
T QFF G YG RVL AG SN G + + A++ A+ ++ ++G
Sbjct: 286 TLQFFQQASGIDSVVLYGPRVLAAAGVASNTLLLGLNVVFGVAKASSILVAMALTDRVGR 345
Query: 237 RPNLSASGAGVWNFDKNTRLSAGGSLSTMGRGKPDVA 127
RP L AS G+ + L+ G + G + D A
Sbjct: 346 RPLLLASTGGM----TASLLALGSVFAAFGGARDDAA 378
>02_04_0376 - 22474473-22476947
Length = 824
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 320 SPAGPKTLVPYACPSNLPRS-SLKNCRVYPALPNNPSSFCPSVPNTFPLPM 469
SPA P++ P A ++L + + + P+LP P+ PS+P + P+P+
Sbjct: 4 SPALPRSTNPAALLAHLAAVLTSPDWFLNPSLPRLPALLTPSLPESLPVPL 54
>11_06_0295 +
22033367-22034947,22035030-22035137,22035230-22035370,
22035576-22035625,22036100-22036168,22036649-22036781,
22037634-22037747,22037826-22038038,22038387-22038500,
22038768-22038900,22039304-22039416,22040204-22040284,
22040397-22040483
Length = 978
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -2
Query: 458 EKYSVHSDKMTMDYSVKLDTRGSFSMTIAVSWKGKHTAPGFWV 330
E SV D++ DY+ K+D R SF+M+ + + KH + FWV
Sbjct: 359 EFLSVRFDELQEDYN-KVD-RSSFTMSDVLRFGEKHNSYRFWV 399
>07_03_1157 - 24419157-24419948
Length = 263
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 305 PKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSSFCPSVP 448
P V P PK VP+A LP+ L P LP + P VP
Sbjct: 168 PPHPVVPELPKPEVPHAAVPELPKPELPPHPAVPELPKHEEPPHPVVP 215
>07_03_1155 - 24413270-24413728
Length = 152
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +2
Query: 299 LPPKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPMFLS 478
LPP E+ P PK +P P LPR + +PA+P P P +P +P L
Sbjct: 44 LPPHPEL-PELPKPELPPPLPE-LPRPVVPELPPHPAVPELPPLPKPELPPHPVVPEMLP 101
Query: 479 H 481
H
Sbjct: 102 H 102
Score = 29.1 bits (62), Expect = 2.1
Identities = 25/89 (28%), Positives = 32/89 (35%), Gaps = 1/89 (1%)
Frame = +2
Query: 203 HTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPY-ACPSNLPRS 379
H P + LPP + R L +P E+ P L P+ P LP
Sbjct: 47 HPELPELPKPELPPPLPELPRPVVPELPPHPAVP---ELPPLPKPELPPHPVVPEMLPHP 103
Query: 380 SLKNCRVYPALPNNPSSFCPSVPNTFPLP 466
+ YPA+P P P P PLP
Sbjct: 104 VVPELPHYPAVPGFPKHGLPPKPELPPLP 132
>03_01_0084 +
676538-676669,677828-677959,678085-678210,678820-678882,
678964-679061,679133-679340,679859-679930,680016-680108,
680297-680398,680568-680665,681059-681140,681274-681362,
681960-682065,682145-682210,682527-682633,682907-683027,
683226-683411,683490-683789,683887-683967,684061-684225,
684297-684383,684476-684601,684750-684830,684917-684988,
685353-685364
Length = 934
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 334 QNPGAVCLPFQLTAIVIEKLPRVSSFTE*SIVILSECTEYFSVA 465
+ PG C P +L AI+ +KLP VS + + I EYF ++
Sbjct: 504 RRPG--CSPKELFAIINDKLPTVSYESYIDVEIQQRAVEYFELS 545
>05_04_0374 -
20736615-20737037,20737148-20737639,20738145-20738422,
20738576-20738732
Length = 449
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 311 FEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSSFCPSVPNT 454
F+ S GP+ Y P N + ++P LPN +S P +P++
Sbjct: 154 FKKSGLGPRIGEQYGAPFNEEEWEHADAEMFPLLPNVETSVFPLLPSS 201
>09_06_0344 -
22419152-22419250,22419460-22419554,22419952-22420108,
22420825-22420869,22421080-22421211,22421496-22421594,
22421690-22421785,22421968-22422149,22422242-22422494,
22422867-22422974,22423037-22423094,22423462-22423613,
22423698-22423792,22424172-22424287,22424369-22424495,
22424565-22424661,22424745-22424913,22425879-22426027
Length = 742
Score = 28.3 bits (60), Expect = 3.7
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Frame = +2
Query: 215 PLADRFGLPPICLLISRAAFAFLL--------DQSNLPPKFEVSPAGPKTLVPYA 355
PL+ +G P+C L++ F FLL D S+L P +V+P L+ +A
Sbjct: 9 PLSGAYGEGPLCYLLAVDGFRFLLDCGWTDLCDPSHLQPLAKVAPTIDAVLLSHA 63
>06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281
Length = 518
Score = 28.3 bits (60), Expect = 3.7
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 291 WSNKNANAALDISKQIGGRPNLSASGAGVW-NFDKNT-RLSAGGS 163
WSN N+N+ + IG N + S +G W N NT LS GS
Sbjct: 416 WSNSNSNSGSTMPSGIGVASN-AGSSSGSWSNAGSNTGTLSGAGS 459
>06_01_0682 + 5002036-5002573,5002875-5002966
Length = 209
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +2
Query: 167 PPADKRVFLSKFHTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLV 346
P + KR++L ++TP A F ICL A +S PP P+ ++
Sbjct: 34 PNSRKRIWLGSYYTPEKAARAFDAAFICLRGGEAIAGLNFTES--PPAVVARTTDPREVL 91
Query: 347 PYA 355
+A
Sbjct: 92 AFA 94
>11_01_0770 - 6447739-6448158
Length = 139
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 456 KVFGTLGQNDDGLFGKAGYTRQFFND--DRGKLEGQAYGTRVLGPAGDTSNFGGRLDWSN 283
K+ G G D G + RQ+ +D + G G+ R G G+ GR+ WS
Sbjct: 4 KLVGEDGDGGDEDGGDDRWWRQWGSDLVEDGVGGGEDRWRRWRGTVGEDGGTAGRISWSR 63
Query: 282 KNANAA 265
+ A A+
Sbjct: 64 RTARAS 69
>07_03_1425 + 26489446-26491425
Length = 659
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 308 KFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPN 418
+F + A ++VPY P P SSL+ RVY P+
Sbjct: 312 RFRGAGARGDSVVPYLQPVQSPVSSLRMLRVYGTFPS 348
>04_03_0280 + 13854758-13855585
Length = 275
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 260 SRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNL 370
S F ++D+S L P+ + A P +VP+ C L
Sbjct: 144 SGGRFVVIVDESKLVPRLGCTGAVPVEVVPFGCDHTL 180
>08_02_1426 +
27009720-27010787,27011846-27012517,27012999-27013793,
27014914-27014943,27018095-27019987
Length = 1485
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 300 CLRSLRCRLPDPKPWCRMLALPTYRDRH 383
CL+ RL P W R L+ T R+RH
Sbjct: 82 CLQDYVVRLEKPSWWRRRLSCTTLRERH 109
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +2
Query: 323 PAGPKTLVPYAC-----PSNLPRSSLKNCRVYPALPNNPSSF 433
PAGP T VPY P N P ++ +P+ PN P F
Sbjct: 480 PAGPMTAVPYNSYPVFPPMNYPMVNIP--PPFPSAPNTPPGF 519
>07_03_0775 -
21413522-21413797,21414016-21414178,21414274-21414351,
21415983-21416176
Length = 236
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +2
Query: 302 PPKFEVSPAGPKTLVPYACP--SNLPRSSLKNCR 397
PP + P P T P ACP + R S K CR
Sbjct: 47 PPPPQQQPVAPATAAPNACPRSESGTRPSSKACR 80
>06_03_0821 -
25003001-25003336,25004248-25004376,25004984-25005040,
25005435-25005539
Length = 208
Score = 27.1 bits (57), Expect = 8.5
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -1
Query: 342 RVLGPAGDTSNFGGRLDWSNKNANAALDISKQIGGRPNLSASGAGVWN--FDKNTRLSAG 169
R+ P G S+FGG W A KQI GR + + SGA WN D ++ LS+
Sbjct: 150 RIRAPTG-WSSFGG-CGWLEDRPPATR--LKQIEGRSSAAWSGAREWNTSSDNSSTLSSS 205
Query: 168 GS 163
+
Sbjct: 206 NA 207
>06_03_0046 - 15852653-15854560
Length = 635
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 377 SSLKNCRVYPALPNNPSSFCPSVPNTFP 460
S K VYP +P++P + S P FP
Sbjct: 291 SPAKKMAVYPRIPSSPRNTVQSNPQNFP 318
>06_01_0680 + 4983054-4983080,4983243-4983590
Length = 124
Score = 27.1 bits (57), Expect = 8.5
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = +2
Query: 167 PPADKRVFLSKFHTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLV 346
P + KR++L + +P A F ICL A +S PP + P+ ++
Sbjct: 40 PNSLKRIWLGSYDSPEKAARAFDAAFICLRGGEAIAGLNFPES--PPTVVARTSDPREVL 97
Query: 347 PYACPSNLPRSSLKNC 394
YA S+ R +C
Sbjct: 98 AYA-TSHANRLGCHHC 112
>06_01_0333 +
2404459-2404857,2404917-2405009,2405428-2405522,
2406146-2406219,2406307-2406395,2406745-2406858
Length = 287
Score = 27.1 bits (57), Expect = 8.5
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 302 PPKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPN-NPSSFCP 439
PP F P+ P +P+ PS+ P ++L + PAL + SS CP
Sbjct: 6 PPLFLSLPSPPPPPLPHLLPSHRPAAAL---TLAPALSSRRVSSVCP 49
>02_03_0202 +
16359539-16359763,16360113-16360193,16361362-16361600,
16361828-16362029,16362108-16362188,16362272-16362455,
16362625-16362791,16363020-16363802
Length = 653
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 362 KGKHTAPGFWVRQATPQTSEAGWIGL 285
KG H PG W+ A + G IGL
Sbjct: 598 KGPHDVPGHWLVTAAKLVKDGGKIGL 623
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,226,909
Number of Sequences: 37544
Number of extensions: 385257
Number of successful extensions: 1082
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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