Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_I12
(501 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36450.1 68415.m04474 AP2 domain-containing protein low simil... 30 1.0
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 29 1.3
At1g19350.5 68414.m02408 brassinosteroid signalling positive reg... 29 1.8
At1g19350.4 68414.m02407 brassinosteroid signalling positive reg... 29 1.8
At1g19350.3 68414.m02405 brassinosteroid signalling positive reg... 29 1.8
At1g19350.1 68414.m02406 brassinosteroid signalling positive reg... 29 1.8
At1g04120.1 68414.m00401 ABC transporter family protein Strong s... 29 2.3
At5g18260.1 68418.m02146 expressed protein 28 4.1
At3g24550.1 68416.m03083 protein kinase family protein contains ... 28 4.1
At5g11990.1 68418.m01402 proline-rich family protein contains pr... 27 5.4
At5g48650.1 68418.m06016 nuclear transport factor 2 (NTF2) famil... 27 7.1
At4g02150.1 68417.m00287 importin alpha-2 subunit identical to i... 27 7.1
At5g62940.1 68418.m07897 Dof-type zinc finger domain-containing ... 27 9.4
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 27 9.4
At4g10880.1 68417.m01771 hypothetical protein predicted proteins... 27 9.4
At1g68020.2 68414.m07771 glycosyl transferase family 20 protein ... 27 9.4
At1g68020.1 68414.m07770 glycosyl transferase family 20 protein ... 27 9.4
>At2g36450.1 68415.m04474 AP2 domain-containing protein low
similarity to DREB1B GI:3738226 from [Arabidopsis
thaliana]; contains Pfam profile PF00847: AP2 domain
Length = 184
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 158 LSDPPADKRVFLSKFHTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPA 328
+ +P R++L F TP A + + + L S+A F S+LP +SPA
Sbjct: 31 IREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNFPNSVSSLPAPTSMSPA 87
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = +2
Query: 290 QSNLPPKFEVSPAGPKTLVPY---ACPSNLPRSSLKNCRVYPALPNNPS 427
+ N P VS + PK LVPY C S KN +Y P N S
Sbjct: 307 ECNCPFNAFVSVSDPKCLVPYQKPGCKSGFNMVKFKNLELYGIYPANDS 355
>At1g19350.5 68414.m02408 brassinosteroid signalling positive
regulator, putative similar to BZR1 protein [Arabidopsis
thaliana] gi|20270971|gb|AAM18490
Length = 335
Score = 29.1 bits (62), Expect = 1.8
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = +2
Query: 203 HTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLPRSS 382
H +PL+ F P + +S ++ +F P P T+ P+ +P SS
Sbjct: 110 HNQSPLSSTFDSPILSYQVSPSSSSFP------SPSRVGDPHNISTIFPFLRNGGIP-SS 162
Query: 383 LKNCRVYPALPNNPSSFCPSVPNTFPLPMFLS 478
L R+ + P P P+ N PLP + S
Sbjct: 163 LPPLRISNSAPVTPPVSSPTSRNPKPLPTWES 194
>At1g19350.4 68414.m02407 brassinosteroid signalling positive
regulator, putative similar to BZR1 protein [Arabidopsis
thaliana] gi|20270971|gb|AAM18490
Length = 335
Score = 29.1 bits (62), Expect = 1.8
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = +2
Query: 203 HTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLPRSS 382
H +PL+ F P + +S ++ +F P P T+ P+ +P SS
Sbjct: 110 HNQSPLSSTFDSPILSYQVSPSSSSFP------SPSRVGDPHNISTIFPFLRNGGIP-SS 162
Query: 383 LKNCRVYPALPNNPSSFCPSVPNTFPLPMFLS 478
L R+ + P P P+ N PLP + S
Sbjct: 163 LPPLRISNSAPVTPPVSSPTSRNPKPLPTWES 194
>At1g19350.3 68414.m02405 brassinosteroid signalling positive
regulator, putative similar to BZR1 protein [Arabidopsis
thaliana] gi|20270971|gb|AAM18490
Length = 357
Score = 29.1 bits (62), Expect = 1.8
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = +2
Query: 203 HTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLPRSS 382
H +PL+ F P + +S ++ +F P P T+ P+ +P SS
Sbjct: 132 HNQSPLSSTFDSPILSYQVSPSSSSFP------SPSRVGDPHNISTIFPFLRNGGIP-SS 184
Query: 383 LKNCRVYPALPNNPSSFCPSVPNTFPLPMFLS 478
L R+ + P P P+ N PLP + S
Sbjct: 185 LPPLRISNSAPVTPPVSSPTSRNPKPLPTWES 216
>At1g19350.1 68414.m02406 brassinosteroid signalling positive
regulator, putative similar to BZR1 protein [Arabidopsis
thaliana] gi|20270971|gb|AAM18490
Length = 335
Score = 29.1 bits (62), Expect = 1.8
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = +2
Query: 203 HTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLPRSS 382
H +PL+ F P + +S ++ +F P P T+ P+ +P SS
Sbjct: 110 HNQSPLSSTFDSPILSYQVSPSSSSFP------SPSRVGDPHNISTIFPFLRNGGIP-SS 162
Query: 383 LKNCRVYPALPNNPSSFCPSVPNTFPLPMFLS 478
L R+ + P P P+ N PLP + S
Sbjct: 163 LPPLRISNSAPVTPPVSSPTSRNPKPLPTWES 194
>At1g04120.1 68414.m00401 ABC transporter family protein Strong
similarity to MRP-like ABC transporter gb|U92650 from A.
thaliana and canalicular multi-drug resistance protein
gb|L49379 from Rattus norvegicus
Length = 1514
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 103 FLKRMWWFLNFIIC 62
FL R+WWFL F IC
Sbjct: 143 FLVRIWWFLAFSIC 156
>At5g18260.1 68418.m02146 expressed protein
Length = 320
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 344 VPYACPSNLPRSSLKNCRVYPALPNNPSSFC 436
VP+ P+N SSL +C YP + NP S C
Sbjct: 91 VPWETPTNNQSSSLTHCS-YPRVFCNPVSVC 120
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 414 GKAGYTRQFFNDDRGKLEGQAYGTRVLGPAGDTSN 310
G Y +NDD K A GT+ G G+ SN
Sbjct: 579 GSTDYDTSQYNDDMIKFRKMALGTQEYGTTGEYSN 613
>At5g11990.1 68418.m01402 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 181
Score = 27.5 bits (58), Expect = 5.4
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +2
Query: 203 HTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLP 373
H+P PL+ PP+ +I F +S PP +SP G + P + PS+ P
Sbjct: 75 HSPPPLSQSLSPPPLITVIHPPPPRFYYFESTPPPP-PLSPDGKGS--PPSVPSSPP 128
>At5g48650.1 68418.m06016 nuclear transport factor 2 (NTF2) family
protein / RNA recognition motif (RRM)-containing protein
Length = 458
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 317 PQTSEAGWIGLIRMQTLPLISASK*AEDQTCRQVEPVCGTLTRTL 183
P+T + + I T +I+ K +E C V PVC +++ L
Sbjct: 143 PETIDGEVVSGINSTTPTIINGMKGSEQAACVSVNPVCKEVSKPL 187
>At4g02150.1 68417.m00287 importin alpha-2 subunit identical to
importin alpha-2 subunit (Karyopherin alpha-2 subunit)
(KAP alpha) SP:O04294 from [Arabidopsis thaliana]
Length = 531
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1
Query: 309 FGGRLDWSNKNANAALDISKQIGGRPNLSASGAGVWNFDKNTRLSA 172
F + + + D+S + NL A AG+W+ D N++L A
Sbjct: 50 FTSSMAFGSATGQTEQDLSSANQLKDNLPAMVAGIWSEDSNSQLEA 95
>At5g62940.1 68418.m07897 Dof-type zinc finger domain-containing
protein Dof zinc finger protein, Oryza sativa,
EMBL:AB028129
Length = 372
Score = 26.6 bits (56), Expect = 9.4
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 477 DKNIGNGKVFGTLGQNDDGLFGKAGYTRQFFNDDRGKLEGQAYGT 343
D+ NG G G++D G +G GY + G + G YGT
Sbjct: 322 DQCYSNGGGSGGAGKSDGGGYGNGGYINGLGSSWNGLMNG--YGT 364
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 26.6 bits (56), Expect = 9.4
Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = +2
Query: 143 PRPIVLSDPPADKRVFLSKFHTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEV- 319
P P+ S PP + PAP+ PP ++ + ++ QS PP E
Sbjct: 684 PSPVHYSSPPPPPSAPCEESPPPAPVVHHSPPPP---MVHHSPPPPVIHQSPPPPSPEYE 740
Query: 320 SPAGPKTLVPYACPSNLP 373
P P V YA P P
Sbjct: 741 GPLPPVIGVSYASPPPPP 758
>At4g10880.1 68417.m01771 hypothetical protein predicted proteins,
Arabidopsis thaliana
Length = 172
Score = 26.6 bits (56), Expect = 9.4
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = -1
Query: 471 NIGNGKVFGTLGQNDDGLFGKAGYTRQFFNDDRGKLEG-QAYGTRVLGP 328
N G K++ D G + + ND+RGK +G Q Y + P
Sbjct: 42 NCGPFKIYRDFSDEDQGYLLNYNFYNLYLNDNRGKNKGLQDYRLLIWNP 90
>At1g68020.2 68414.m07771 glycosyl transferase family 20 protein /
trehalose-phosphatase family protein similar to
SP|Q00764 Alpha,alpha-trehalose-phosphate synthase
[UDP-forming] 56 kDa subunit (EC 2.4.1.15)
(Trehalose-6-phosphate synthase) {Saccharomyces
cerevisiae}; contains Pfam profile: PF02358
trehalose-phosphatase
Length = 860
Score = 26.6 bits (56), Expect = 9.4
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 300 RLDWSNKNANAALDISKQIGGRPNLS-ASGAGVWNFD 193
+L+ +N+N + L +S+ IG P+LS A WN D
Sbjct: 475 KLEANNRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVD 511
>At1g68020.1 68414.m07770 glycosyl transferase family 20 protein /
trehalose-phosphatase family protein similar to
SP|Q00764 Alpha,alpha-trehalose-phosphate synthase
[UDP-forming] 56 kDa subunit (EC 2.4.1.15)
(Trehalose-6-phosphate synthase) {Saccharomyces
cerevisiae}; contains Pfam profile: PF02358
trehalose-phosphatase
Length = 700
Score = 26.6 bits (56), Expect = 9.4
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 300 RLDWSNKNANAALDISKQIGGRPNLS-ASGAGVWNFD 193
+L+ +N+N + L +S+ IG P+LS A WN D
Sbjct: 475 KLEANNRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVD 511
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,798,646
Number of Sequences: 28952
Number of extensions: 286718
Number of successful extensions: 829
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 888318720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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