BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_I11
(627 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD... 252 3e-67
AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA... 252 3e-67
AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p pro... 237 9e-63
AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB... 237 9e-63
X69677-1|CAB41492.1| 197|Drosophila melanogaster ribosomal prot... 142 5e-34
AY071534-1|AAL49156.1| 181|Drosophila melanogaster RE57564p pro... 34 0.18
AE013599-2494|AAF57847.2| 181|Drosophila melanogaster CG4866-PA... 34 0.18
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 33 0.32
U54982-1|AAC16665.1| 850|Drosophila melanogaster stn-A protein. 31 1.7
AE014298-3233|ABI31011.1| 850|Drosophila melanogaster CG12500-P... 31 1.7
AE014298-3232|EAA46058.2| 850|Drosophila melanogaster CG12500-P... 31 1.7
>AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD,
isoform D protein.
Length = 195
Score = 252 bits (617), Expect = 3e-67
Identities = 123/145 (84%), Positives = 130/145 (89%)
Frame = -1
Query: 594 MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 415
MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1 MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60
Query: 414 LLTLEEKDPKRLFEGNAXXXXXXXXXXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 235
LLTL+EKD KRLF+GNA LDE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61 LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120
Query: 234 AKSIHHARILIRQRHIRVRKQVVNI 160
AKSIHHAR+LIRQRHIRVRKQVVNI
Sbjct: 121 AKSIHHARVLIRQRHIRVRKQVVNI 145
Score = 82.2 bits (194), Expect = 5e-16
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -3
Query: 151 IVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGATNDEEED 14
+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL+K QGGG EEE+
Sbjct: 149 VVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLKKNQGGGGGAAEEEE 194
>AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA,
isoform A protein.
Length = 195
Score = 252 bits (617), Expect = 3e-67
Identities = 123/145 (84%), Positives = 130/145 (89%)
Frame = -1
Query: 594 MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 415
MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1 MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60
Query: 414 LLTLEEKDPKRLFEGNAXXXXXXXXXXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 235
LLTL+EKD KRLF+GNA LDE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61 LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120
Query: 234 AKSIHHARILIRQRHIRVRKQVVNI 160
AKSIHHAR+LIRQRHIRVRKQVVNI
Sbjct: 121 AKSIHHARVLIRQRHIRVRKQVVNI 145
Score = 82.2 bits (194), Expect = 5e-16
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -3
Query: 151 IVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGATNDEEED 14
+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL+K QGGG EEE+
Sbjct: 149 VVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLKKNQGGGGGAAEEEE 194
>AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p
protein.
Length = 137
Score = 237 bits (580), Expect = 9e-63
Identities = 115/137 (83%), Positives = 122/137 (89%)
Frame = -1
Query: 594 MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 415
MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1 MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60
Query: 414 LLTLEEKDPKRLFEGNAXXXXXXXXXXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 235
LLTL+EKD KRLF+GNA LDE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61 LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120
Query: 234 AKSIHHARILIRQRHIR 184
AKSIHHAR+LIRQRHIR
Sbjct: 121 AKSIHHARVLIRQRHIR 137
>AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB,
isoform B protein.
Length = 137
Score = 237 bits (580), Expect = 9e-63
Identities = 115/137 (83%), Positives = 122/137 (89%)
Frame = -1
Query: 594 MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 415
MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1 MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60
Query: 414 LLTLEEKDPKRLFEGNAXXXXXXXXXXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 235
LLTL+EKD KRLF+GNA LDE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61 LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120
Query: 234 AKSIHHARILIRQRHIR 184
AKSIHHAR+LIRQRHIR
Sbjct: 121 AKSIHHARVLIRQRHIR 137
>X69677-1|CAB41492.1| 197|Drosophila melanogaster ribosomal protein
protein.
Length = 197
Score = 142 bits (343), Expect = 5e-34
Identities = 79/134 (58%), Positives = 91/134 (67%)
Frame = -1
Query: 594 MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 415
MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGL+ R V VKY LA+IRK ARE
Sbjct: 1 MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLQQARSV-AVKYALAKIRKVARE 59
Query: 414 LLTLEEKDPKRLFEGNAXXXXXXXXXXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 235
LLTL+EKD KRLF+G + L + + G + L +AGL
Sbjct: 60 LLTLDEKDAKRLFQGKSLVRRLVRIGVL-KSPHEARLRAGSEDSGLLGASSADAGVQAGL 118
Query: 234 AKSIHHARILIRQR 193
AKSIHHAR+LIRQR
Sbjct: 119 AKSIHHARVLIRQR 132
Score = 37.5 bits (83), Expect = 0.015
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = -2
Query: 188 FVSASRW*TFLRHR-PPGLRQAH*LLS-EVAVRRRPARSRQEEEPAQ 54
FV ASRW T PGL +A S ++ +R RP+RSRQEEEPA+
Sbjct: 134 FVLASRWSTIPSFVVTPGLPEATSNFSLKMPLRTRPSRSRQEEEPAR 180
Score = 29.9 bits (64), Expect = 2.9
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = -3
Query: 316 ETGLCARFED*GLLGAPSSDSGVQ-GWSCEVNPSCPHLDQTEAYSCPQAGGEHSFVIVRL 140
E L A ED GLLGA S+D+GVQ G + ++ + + Q + SFV+
Sbjct: 92 EARLRAGSEDSGLLGASSADAGVQAGLAKSIHHARVLIRQRTFVLASRWSTIPSFVVTPG 151
Query: 139 DSGKHIDFSLKSPFGGGRPGRVKRK 65
+FSLK P RP R +++
Sbjct: 152 LPEATSNFSLKMPL-RTRPSRSRQE 175
>AY071534-1|AAL49156.1| 181|Drosophila melanogaster RE57564p
protein.
Length = 181
Score = 33.9 bits (74), Expect = 0.18
Identities = 22/116 (18%), Positives = 48/116 (41%)
Frame = -1
Query: 513 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXX 334
+E KI+ + ++ + + + IR+ A + L+ +P + E
Sbjct: 28 KENKILRRFHIQKREDYTKYNKLSREIRELAERIAKLDASEPFKT-EATTMLLNKLHAMG 86
Query: 333 LDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVV 166
+ Q+ L+ + F RRL + K +++ + A LI H+RV +++
Sbjct: 87 VSNDQLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVRVGPEMI 142
>AE013599-2494|AAF57847.2| 181|Drosophila melanogaster CG4866-PA
protein.
Length = 181
Score = 33.9 bits (74), Expect = 0.18
Identities = 22/116 (18%), Positives = 48/116 (41%)
Frame = -1
Query: 513 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXX 334
+E KI+ + ++ + + + IR+ A + L+ +P + E
Sbjct: 28 KENKILRRFHIQKREDYTKYNKLSREIRELAERIAKLDASEPFKT-EATTMLLNKLHAMG 86
Query: 333 LDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVV 166
+ Q+ L+ + F RRL + K +++ + A LI H+RV +++
Sbjct: 87 VSNDQLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVRVGPEMI 142
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 33.1 bits (72), Expect = 0.32
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 283 GLLGAPSSDSGVQGWSCEVNPSCPHLDQTEAYSC 182
GL G P+S G G+ C+V+ CP+ Y C
Sbjct: 9018 GLSGDPTSVIGCHGYECQVDADCPNSKACMGYRC 9051
>U54982-1|AAC16665.1| 850|Drosophila melanogaster stn-A protein.
Length = 850
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 127 ACRSPGGR*RRNVHHLLADTNMPLSDQDAGMMD*LRKTSLEHLSLKTALQEVLNLQTEHI 306
A +P + R+ + +LL ++ L+D +A ++ +H +L L E L+ + I
Sbjct: 268 ALANPKRKLRKGIQNLLLSESIELADSEAELLAATSNAEPQH-NLLDDLDEELSESSVPI 326
Query: 307 ---IQFHLFLIKHSDP 345
+ HL LIKH P
Sbjct: 327 DLSVSLHLHLIKHKQP 342
>AE014298-3233|ABI31011.1| 850|Drosophila melanogaster CG12500-PB,
isoform B protein.
Length = 850
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 127 ACRSPGGR*RRNVHHLLADTNMPLSDQDAGMMD*LRKTSLEHLSLKTALQEVLNLQTEHI 306
A +P + R+ + +LL ++ L+D +A ++ +H +L L E L+ + I
Sbjct: 268 ALANPKRKLRKGIQNLLLSESIELADSEAELLAATSNAEPQH-NLLDDLDEELSESSVPI 326
Query: 307 ---IQFHLFLIKHSDP 345
+ HL LIKH P
Sbjct: 327 DLSVSLHLHLIKHKQP 342
>AE014298-3232|EAA46058.2| 850|Drosophila melanogaster CG12500-PA,
isoform A protein.
Length = 850
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 127 ACRSPGGR*RRNVHHLLADTNMPLSDQDAGMMD*LRKTSLEHLSLKTALQEVLNLQTEHI 306
A +P + R+ + +LL ++ L+D +A ++ +H +L L E L+ + I
Sbjct: 268 ALANPKRKLRKGIQNLLLSESIELADSEAELLAATSNAEPQH-NLLDDLDEELSESSVPI 326
Query: 307 ---IQFHLFLIKHSDP 345
+ HL LIKH P
Sbjct: 327 DLSVSLHLHLIKHKQP 342
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,158,213
Number of Sequences: 53049
Number of extensions: 574751
Number of successful extensions: 1800
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1797
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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