Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_I11
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69302-5|CAA93262.1| 189|Caenorhabditis elegans Hypothetical pr... 219 1e-57
U97189-6|AAC48162.1| 183|Caenorhabditis elegans Hypothetical pr... 31 0.67
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 31 0.67
Z71262-1|CAA95813.1| 418|Caenorhabditis elegans Hypothetical pr... 28 4.8
U76402-1|AAB39734.1| 777|Caenorhabditis elegans degenerin protein. 28 6.3
U40798-3|AAA81473.2| 777|Caenorhabditis elegans Uncoordinated p... 28 6.3
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical pr... 27 8.3
U39652-5|AAV28338.1| 986|Caenorhabditis elegans Hypothetical pr... 27 8.3
U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical pr... 27 8.3
U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger pro... 27 8.3
AF067619-3|AAV28340.1| 153|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z69302-5|CAA93262.1| 189|Caenorhabditis elegans Hypothetical
protein F40F8.10 protein.
Length = 189
Score = 219 bits (536), Expect = 1e-57
Identities = 106/141 (75%), Positives = 121/141 (85%)
Frame = -1
Query: 582 RVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTL 403
R+ +V SK +PRRPFEK RLDQELK+IG +GL+NKREVWRVKYTLA++RKAARELLTL
Sbjct: 3 RLKTVQSKVTKSPRRPFEKERLDQELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTL 62
Query: 402 EEKDPKRLFEGNAXXXXXXXXXXLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSI 223
E+KDPKRLFEGNA LDE +MKLDYVLGLK+EDFLERRLQTQVFK GLAKSI
Sbjct: 63 EDKDPKRLFEGNALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSI 122
Query: 222 HHARILIRQRHIRVRKQVVNI 160
HHARILI+Q HIRVR+QVV++
Sbjct: 123 HHARILIKQHHIRVRRQVVDV 143
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = -3
Query: 151 IVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGATNDE 23
IVRLDS KHIDFSL+SP+GGGRPGRVKR+ LRKG G G ++E
Sbjct: 147 IVRLDSQKHIDFSLQSPYGGGRPGRVKRRTLRKGDGAGGDDEE 189
>U97189-6|AAC48162.1| 183|Caenorhabditis elegans Hypothetical
protein C48B6.2 protein.
Length = 183
Score = 31.1 bits (67), Expect = 0.67
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Frame = -1
Query: 474 KREVWRVKYTLA-RIRKAARELLTLEEKDPKR--LFEGNAXXXXXXXXXXLDEKQMKLDY 304
KRE + + TLA + R+ A + L E DP R E + ++
Sbjct: 40 KREHYALYNTLAAKSREVADLIKNLSESDPFRSKCTEDMLTKFYAAGLVPTSDTLERIGK 99
Query: 303 VLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVV 166
V G F RRL + G+ +S+ A L+ Q H+R+ ++V
Sbjct: 100 VTGAS---FARRRLPVVMRNIGMCESVKTASDLVEQGHVRIGTKLV 142
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 238 SCEVNPSCPHLDQTEAYSCPQAGGEHSFVIVR 143
+CE+N CP D ++CP GG H+ I R
Sbjct: 363 ACELN--CPKCDPKHTFTCPAVGGIHNKCIKR 392
>Z71262-1|CAA95813.1| 418|Caenorhabditis elegans Hypothetical
protein F22D6.1 protein.
Length = 418
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 121 QCACRSPGGR*R-RNVHHLLADTNMPLSDQDAGM 219
QC + P R + VHH L D +MP+SD M
Sbjct: 381 QCWAKLPSDRATMKTVHHKLKDLSMPMSDVSFSM 414
>U76402-1|AAB39734.1| 777|Caenorhabditis elegans degenerin protein.
Length = 777
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +3
Query: 393 PSPRVSTVHGQPYGCERACT*RATLHAC-CGD 485
P P + H P GC R C L C CGD
Sbjct: 540 PVPYIYNEHYSPEGCHRNCFQLKVLEICGCGD 571
>U40798-3|AAA81473.2| 777|Caenorhabditis elegans Uncoordinated
protein 8 protein.
Length = 777
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +3
Query: 393 PSPRVSTVHGQPYGCERACT*RATLHAC-CGD 485
P P + H P GC R C L C CGD
Sbjct: 540 PVPYIYNEHYSPEGCHRNCFQLKVLEICGCGD 571
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein
K04H4.2c protein.
Length = 1446
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -3
Query: 277 LGAPSSDSGVQGWSCEVNPSCPHLDQTEAYSCP 179
+GA S G++C N CP T + CP
Sbjct: 937 VGACMSGRCASGYTCSNNVCCPQTTTTNPFVCP 969
>Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical
protein K04H4.2b protein.
Length = 788
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -3
Query: 277 LGAPSSDSGVQGWSCEVNPSCPHLDQTEAYSCP 179
+GA S G++C N CP T + CP
Sbjct: 279 VGACMSGRCASGYTCSNNVCCPQTTTTNPFVCP 311
>Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical
protein K04H4.2a protein.
Length = 628
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -3
Query: 277 LGAPSSDSGVQGWSCEVNPSCPHLDQTEAYSCP 179
+GA S G++C N CP T + CP
Sbjct: 279 VGACMSGRCASGYTCSNNVCCPQTTTTNPFVCP 311
>U39652-5|AAV28338.1| 986|Caenorhabditis elegans Hypothetical
protein R07E4.1b protein.
Length = 986
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/42 (23%), Positives = 28/42 (66%)
Frame = -1
Query: 291 KIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVV 166
++EDFLE+ ++ ++ ++ ++I H+R LI+ + ++ ++
Sbjct: 164 QMEDFLEKTVRPRMLQSVSVEAISHSRALIQFNYKEPQQSII 205
>U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical
protein R07E4.1a protein.
Length = 1122
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/42 (23%), Positives = 28/42 (66%)
Frame = -1
Query: 291 KIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVV 166
++EDFLE+ ++ ++ ++ ++I H+R LI+ + ++ ++
Sbjct: 300 QMEDFLEKTVRPRMLQSVSVEAISHSRALIQFNYKEPQQSII 341
>U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger
protein protein.
Length = 839
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 249 TPESEDGAPRSPQSSNRAHNPVSSVSHQALRP*PDDVVE-HCLQTIS*DPSPRVSTVHGQ 425
T + GAP + N P ++ + A P V + L +S + + + ++
Sbjct: 749 TTAASSGAPVNSNIQNHRATPSTAGAPMAATPIMTAVTSANELAALSPERAQALLNMYRM 808
Query: 426 PYGCERACT 452
P GC+R CT
Sbjct: 809 PLGCQRCCT 817
>AF067619-3|AAV28340.1| 153|Caenorhabditis elegans Hypothetical
protein K03E5.2b protein.
Length = 153
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 166 EHSFVIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRK 53
++S IVRL SG + S K G G P VK K+L++
Sbjct: 92 QYSDAIVRLQSGTNQFESQKGMTGFGTPRDVKGKHLKR 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,892,925
Number of Sequences: 27780
Number of extensions: 269017
Number of successful extensions: 908
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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