Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_I09
         (422 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   0.92 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   0.92 
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    23   0.92 
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   0.92 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   4.9  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   6.5  

>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.4 bits (48), Expect = 0.92
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = -2

Query: 154 SGSLMPRFSATASA 113
           SGS++P FS+TAS+
Sbjct: 24  SGSMVPSFSSTASS 37


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.4 bits (48), Expect = 0.92
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = -2

Query: 154 SGSLMPRFSATASA 113
           SGS++P FS+TAS+
Sbjct: 83  SGSMVPSFSSTASS 96


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 23.4 bits (48), Expect = 0.92
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = -2

Query: 154 SGSLMPRFSATASA 113
           SGS++P FS+TAS+
Sbjct: 24  SGSMVPSFSSTASS 37


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 23.4 bits (48), Expect = 0.92
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = -2

Query: 154 SGSLMPRFSATASA 113
           SGS++P FS+TAS+
Sbjct: 83  SGSMVPSFSSTASS 96


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 100 GTT*GRSPSQRNVASN 147
           GTT  +SP++R  +SN
Sbjct: 176 GTTLSQSPNRRRASSN 191


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 113 PQVVPPDLFENR 78
           P+ VP DLFEN+
Sbjct: 333 PRRVPFDLFENK 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,869
Number of Sequences: 336
Number of extensions: 749
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)