Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_I08
(541 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ277789-1|CAB93525.1| 1738|Drosophila melanogaster mismatch dep... 30 2.3
AF132141-1|AAD33588.1| 1095|Drosophila melanogaster G/T mismatch... 30 2.3
AE014135-90|AAF59338.1| 1738|Drosophila melanogaster CG1981-PA p... 30 2.3
AE014296-1986|AAS65029.1| 3135|Drosophila melanogaster CG18331-P... 29 4.1
>AJ277789-1|CAB93525.1| 1738|Drosophila melanogaster mismatch depedent
uracil/thymineDNA glycosylase protein.
Length = 1738
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 378 NSNGSGQETIKSSTTARTTNAVIYNSGDSSNTTEDVH--PCSPFIPPPARGFSA 533
NSN S S+++ART NA IY +G++ E H C I P SA
Sbjct: 1529 NSNFSVSSLAASASSARTDNA-IYGNGETKGNNESSHHNSCDTNIDYPIHNQSA 1581
>AF132141-1|AAD33588.1| 1095|Drosophila melanogaster G/T
mismatch-specific thymineDNA glycosylase protein.
Length = 1095
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 378 NSNGSGQETIKSSTTARTTNAVIYNSGDSSNTTEDVH--PCSPFIPPPARGFSA 533
NSN S S+++ART NA IY +G++ E H C I P SA
Sbjct: 886 NSNFSVSSLAASASSARTDNA-IYGNGETKGNNESSHHNSCDTNIDYPIHNQSA 938
>AE014135-90|AAF59338.1| 1738|Drosophila melanogaster CG1981-PA
protein.
Length = 1738
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 378 NSNGSGQETIKSSTTARTTNAVIYNSGDSSNTTEDVH--PCSPFIPPPARGFSA 533
NSN S S+++ART NA IY +G++ E H C I P SA
Sbjct: 1529 NSNFSVSSLAASASSARTDNA-IYGNGETKGNNESSHHNSCDTNIDYPIHNQSA 1581
>AE014296-1986|AAS65029.1| 3135|Drosophila melanogaster CG18331-PA
protein.
Length = 3135
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 378 NSNGSGQETIKSSTTARTTNAVIYNSGDSSNTTEDV 485
+SNG G T +SSTT TT + G+S+ +++ V
Sbjct: 934 SSNGDGNST-QSSTTTTTTTTTSSDGGESTTSSDPV 968
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 378 NSNGSGQETIKSSTTARTTNAVIYNSGDSSNTTEDV 485
+SNG G T +SSTT TT + G+S+ +++ V
Sbjct: 1174 SSNGDGNST-QSSTTTTTTTTTSSDGGESTTSSDPV 1208
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 378 NSNGSGQETIKSSTTARTTNAVIYNSGDSSNTTEDV 485
+SNG G T +SSTT TT + G+S+ +++ V
Sbjct: 1254 SSNGDGNST-QSSTTTTTTTTTSSDGGESTTSSDPV 1288
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 378 NSNGSGQETIKSSTTARTTNAVIYNSGDSSNTTEDV 485
+SNG G T +SSTT TT + G+S+ +++ V
Sbjct: 1334 SSNGDGNST-QSSTTTTTTTTTSSDGGESTTSSDPV 1368
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 378 NSNGSGQETIKSSTTARTTNAVIYNSGDSSNTTEDV 485
+SNG G T +SSTT TT + G+S+ +++ V
Sbjct: 1494 SSNGDGNST-QSSTTTTTTTTTSSDGGESTTSSDPV 1528
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 378 NSNGSGQETIKSSTTARTTNAVIYNSGDSSNTTEDV 485
+SNG G T +SSTT TT + G+S+ +++ V
Sbjct: 1654 SSNGDGNST-QSSTTTTTTTTTSSDGGESTTSSDPV 1688
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 378 NSNGSGQETIKSSTTARTTNAVIYNSGDSSNTTEDV 485
+SNG G T +SSTT TT + G+S+ +++ V
Sbjct: 1734 SSNGDGNST-QSSTTTTTTTTTSSDGGESTTSSDPV 1768
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 378 NSNGSGQETIKSSTTARTTNAVIYNSGDSSNTTEDV 485
+SNG G T +SSTT TT + G+S+ +++ V
Sbjct: 1814 SSNGDGNST-QSSTTTTTTTTTSSDGGESTTSSDPV 1848
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 378 NSNGSGQETIKSSTTARTTNAVIYNSGDSSNTTEDV 485
+SNG G T +SSTT TT + G+S+ +++ V
Sbjct: 1894 SSNGDGNST-QSSTTTTTTTTTSSDGGESTTSSDPV 1928
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 378 NSNGSGQETIKSSTTARTTNAVIYNSGDSSNTTEDV 485
+SNG G T +SSTT TT + G+S+ +++ V
Sbjct: 1974 SSNGDGNST-QSSTTTTTTTTTSSDGGESTTSSDPV 2008
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 378 NSNGSGQETIKSSTTARTTNAVIYNSGDSSNTTEDV 485
+SNG G T +SSTT TT + G+S+ +++ V
Sbjct: 2054 SSNGDGNST-QSSTTTTTTTTTSSDGGESTTSSDPV 2088
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 378 NSNGSGQETIKSSTTARTTNAVIYNSGDSSNTTEDV 485
+SNG G T +SSTT TT + G+S+ +++ V
Sbjct: 2134 SSNGDGNST-QSSTTTTTTTTTSSDGGESTTSSDPV 2168
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 378 NSNGSGQETIKSSTTARTTNAVIYNSGDSSNTTEDV 485
+SNG G T +SSTT TT + G+S+ +++ V
Sbjct: 2214 SSNGDGNST-QSSTTTTTTTTTSSDGGESTTSSDPV 2248
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 378 NSNGSGQETIKSSTTARTTNAVIYNSGDSSNTTEDV 485
+SNG G T +SSTT TT + G+S+ +++ V
Sbjct: 2294 SSNGDGNST-QSSTTTTTTTTTSSDGGESTTSSDPV 2328
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,206,747
Number of Sequences: 53049
Number of extensions: 378140
Number of successful extensions: 1222
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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