Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_I07
(637 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26 |Schizosac... 31 0.11
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 0.17
SPBC1539.10 |||ribosome biogenesis protein Nop16 |Schizosaccharo... 29 0.74
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.3
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 27 1.7
SPAC1610.04 |mug99||meiotically upregulated gene Mug99|Schizosac... 27 3.0
SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase protein... 26 4.0
SPBC1539.04 |||conserved eukaryotic protein|Schizosaccharomyces ... 26 5.2
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 5.2
SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 6.9
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 25 6.9
SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomy... 25 6.9
SPBC3B8.09 |||U3 snoRNP-associated protein Utp3 |Schizosaccharom... 25 6.9
SPAC3F10.10c |map3||pheromone M-factor receptor |Schizosaccharom... 25 9.1
SPAC23H4.04 |||tRNA|Schizosaccharomyces pombe|chr 1|||Manual 25 9.1
>SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.11
Identities = 24/99 (24%), Positives = 48/99 (48%)
Frame = +3
Query: 192 KEDCNRRRMKNTATTEERRLQPPKETNYLWCVGQMIVLLQFLVKSTGASKKERSLTSKKK 371
K + R+R + ++ +E L+ +ET Y G+ I L+ + +R L K++
Sbjct: 130 KAEERRKREEKSSNLDEEELRKSRETVYRDATGRRIDLV------LARKEAKRKLKEKEE 183
Query: 372 QACREEKYYQGAGRKKTIKPAEEGAGEQRTIKPAERRKD 488
+A R+++ QG + + K + Q+T+ P R +D
Sbjct: 184 EARRQKEQQQGVVQVRQQKEYLKELERQKTV-PLARYED 221
Score = 26.2 bits (55), Expect = 4.0
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +1
Query: 34 SGKKEGFQDCGRRSWKKKTIKSAEGAGRKKTNKLAEEGVGRKKTIKLAEEAGRKKTAIAE 213
+GK+ F+ RR ++K+ E RK + + GR+ + LA + ++K E
Sbjct: 123 TGKQVTFKAEERRKREEKSSNLDEEELRKSRETVYRDATGRRIDLVLARKEAKRKLKEKE 182
Query: 214 E*RILQPPKKEDCNHRRRQIIY 279
E Q +++ R+Q Y
Sbjct: 183 EEARRQKEQQQGVVQVRQQKEY 204
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.1 bits (57), Expect(2) = 0.17
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Frame = +1
Query: 10 REERGLPGSGKKEGFQDCGRRSWKKKTIKSA--EGAGRKKTNKLAEEGVGRKKTIKLAEE 183
++ER L +KE +D KKK +K A E R++ +LAE+ + K EE
Sbjct: 583 KQERELKKIREKEKKRD------KKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEE 636
Query: 184 AGRKKTAIAEE*RIL--QPPKKEDCNHRRRQ 270
A +K+ EE R+ Q K+++ ++R+
Sbjct: 637 ARKKR----EEQRLKREQEKKQQELERQKRE 663
Score = 22.2 bits (45), Expect(2) = 0.17
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +1
Query: 379 VAKKNTTKELEERRLSSPRKKELENRGLSNLRKGERTIIKHAEEGAVEDRGIKLA 543
+A++ +E EE+R+ RK+ + R+ + K +EE R K+A
Sbjct: 687 MAREQRLREEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIA 741
>SPBC1539.10 |||ribosome biogenesis protein Nop16
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 209
Score = 28.7 bits (61), Expect = 0.74
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 305 AAVSCEVYGSVEERKIAYLEKKTSMSRRKILPRSWKKEDYQARGRRSWRTEDYQTCGKEK 484
A EV +EE + KK + K+LP S + Y R + TED+++ K+
Sbjct: 131 APAKTEVVRQLEEEAV----KKAARQSNKMLPLSAFEHAYIQRLINKYGTEDFESMAKDV 186
Query: 485 GLSSSM 502
L+S +
Sbjct: 187 KLNSKL 192
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 385 KKNTTKELEERRLSSPRKKELENRGLSNLRKGER 486
K+ T KE+E+ + + KKE++ R L ++ E+
Sbjct: 288 KRYTRKEMEQMKRRTKEKKEMKRRALYDIASDEK 321
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 27.5 bits (58), Expect = 1.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 73 SWKKKTIKSAEGAGRKKTNKLAEEGVGRKKTIKLA 177
+WK I A A R+ K +EG+ R +TI LA
Sbjct: 157 AWKATAIGRASKAAREYLEKNWKEGLSRDETIHLA 191
>SPAC1610.04 |mug99||meiotically upregulated gene
Mug99|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 26.6 bits (56), Expect = 3.0
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +1
Query: 70 RSWKKKTIKSAEGAGRKKTNKLAEEGVGRKKTIKLAEEAGRKKTAIA 210
RSWKK+ K GRK +L GR + A KK I+
Sbjct: 446 RSWKKEYWKELLEEGRKFERQLCRNVFGRSSFYVQQKTAAEKKEHIS 492
>SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 758
Score = 26.2 bits (55), Expect = 4.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 309 AAVQSFGQHTINNLSPSVVAVFFLRWLQYSSFF 211
A VQS QHT + L ++ ++ ++YS FF
Sbjct: 466 ATVQSISQHTHSELEDAIDSLGSFASVKYSGFF 498
>SPBC1539.04 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 279
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 237 EERRLQPPKETNYLWCVGQMIVLL 308
+ER L K T ++W GQ+IVL+
Sbjct: 12 KERVLPVVKNTQFVWFSGQVIVLI 35
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 5.2
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +1
Query: 382 AKKNTTKELEERRLSSPRKKELENRGLSNLRKGERTIIKHAEEGAVEDRGIKLAEGTGRK 561
A++N +E EE+ +K R+ E + AEE A + K A+ +
Sbjct: 597 AEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEK-AKREAEE 655
Query: 562 RTIKPAEDELKKE 600
+ + AE+ K+E
Sbjct: 656 KAKREAEENAKRE 668
Score = 25.0 bits (52), Expect = 9.1
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +1
Query: 382 AKKNTTKELEERRLSSPRKKELENRGLSNLRKGERTIIKHAEEGAVEDRGIKLAEGTGRK 561
A++ +E EE+ +K + R+ E + AEE A + K+ T +
Sbjct: 637 AEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEENAKREAEEKVKRET-EE 695
Query: 562 RTIKPAEDELKKE 600
+ AE+E K+E
Sbjct: 696 NAKRKAEEEGKRE 708
>SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 25.4 bits (53), Expect = 6.9
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 348 RSLTSKKKQACREEKYYQGAGRKKTIKPAEEGAGEQRTIKPAERRKDYHQA 500
RS KK ++ Q +K K +E A E++ + A RK+ H+A
Sbjct: 188 RSYGKKKSTEPLTKRQRQNQQKKLRAKEMQELADEEQRRRLAAHRKELHEA 238
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 6.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 398 PRSWKKEDYQARGRRSWRTEDYQTCGKEKGLSSSMRKKE 514
P S K Y G R + DY CGK + S+MR+ +
Sbjct: 480 PSSLKIHTYSHTGERPFVC-DYAGCGKAFNVRSNMRRHQ 517
>SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 327
Score = 25.4 bits (53), Expect = 6.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 339 KKERSLTSKKKQACREEKYYQGAGRKKTIKPAEEGAGEQR 458
+KER ++KK+ +E+K + R K P EE + +++
Sbjct: 286 EKERKKRAEKKEQQKEKKKEKEKERMKAFIPPEESSKKRK 325
>SPBC3B8.09 |||U3 snoRNP-associated protein Utp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 597
Score = 25.4 bits (53), Expect = 6.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 474 ERRKDYHQACGRRSCGRQRNQACGRNWKKEDYQACG 581
ERR + Q R + R RNQ G + ED ++ G
Sbjct: 431 ERRFERQQRLMREAAARGRNQDAGADLDDEDPESMG 466
>SPAC3F10.10c |map3||pheromone M-factor receptor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 365
Score = 25.0 bits (52), Expect = 9.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 268 VSFGGCSLLSSVVAVFFILRRLQSSFFQLLPQA**SSFFQLL 143
+SFGG +S +V +++ +R FFQ Q F +LL
Sbjct: 167 LSFGGLFFVSRIVVLYWRRQRELQQFFQRDSQLTSKRFLRLL 208
>SPAC23H4.04 |||tRNA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 25.0 bits (52), Expect = 9.1
Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Frame = +2
Query: 287 WPNDCTAAVSCEVYGSVEERKIAYLEKKTSMSRRKILPRSWKKEDYQARG---RRSWRTE 457
WP V + G V+ AYL K + + R+W ED G R W T
Sbjct: 27 WPKS-QDKVFVAMSGGVDSSFSAYLLKSQGYNVEGVFMRNWLDEDSAPSGCPAERDWATV 85
Query: 458 DYQTCGKEKGLSSSMRK----KELW 520
+ C K L+ S R+ KE W
Sbjct: 86 Q-KVC---KKLNISCRRFNFEKEYW 106
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,434,707
Number of Sequences: 5004
Number of extensions: 48276
Number of successful extensions: 223
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 283719918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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