Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_I07
(637 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 36 0.028
SB_53623| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.048
SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10) 32 0.34
SB_32958| Best HMM Match : Transformer (HMM E-Value=2.9) 31 0.78
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 31 0.78
SB_19234| Best HMM Match : Extensin_2 (HMM E-Value=0.23) 30 1.4
SB_54200| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_26305| Best HMM Match : Integrase_Zn (HMM E-Value=9.6) 30 1.4
SB_46530| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_41511| Best HMM Match : SAP (HMM E-Value=2.7e-08) 30 1.8
SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 30 1.8
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_15121| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_14151| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1) 29 3.2
SB_56920| Best HMM Match : T-box (HMM E-Value=2.9e-13) 29 4.2
SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_31725| Best HMM Match : Linker_histone (HMM E-Value=1.5e-37) 29 4.2
SB_25704| Best HMM Match : Linker_histone (HMM E-Value=8.3e-37) 29 4.2
SB_20145| Best HMM Match : WD40 (HMM E-Value=2.4e-09) 29 4.2
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_50019| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_29755| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_24892| Best HMM Match : S-antigen (HMM E-Value=0.037) 29 4.2
SB_20508| Best HMM Match : Filament (HMM E-Value=0.037) 29 4.2
SB_38360| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 5.5
SB_20797| Best HMM Match : SoxE (HMM E-Value=0.046) 28 5.5
SB_974| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10) 28 5.5
SB_37178| Best HMM Match : fn3 (HMM E-Value=4.7e-08) 28 7.3
SB_35913| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 7.3
SB_33615| Best HMM Match : PA (HMM E-Value=9e-16) 28 7.3
SB_27611| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_25716| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 28 7.3
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 27 9.7
SB_42793| Best HMM Match : PARP (HMM E-Value=5.4e-22) 27 9.7
SB_18627| Best HMM Match : Histone (HMM E-Value=1.7e-30) 27 9.7
SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_44477| Best HMM Match : IBR (HMM E-Value=0.00086) 27 9.7
SB_30056| Best HMM Match : Linker_histone (HMM E-Value=2.4e-37) 27 9.7
SB_6600| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 35.9 bits (79), Expect = 0.028
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +1
Query: 385 KKNTTKELEERRLSSPRK-KELENRGLSN-LRKGERTIIKHAEEGAVEDRGIKLAEGTGR 558
KK +E ++R+ + +K KE+E R + ++K E K AEE V++ I+L + R
Sbjct: 315 KKRIEEEEQKRKEAEEKKAKEIEQRRMEEEIKKEEEKKRKEAEEKRVKEEQIRLEKERKR 374
Query: 559 KRTIKPAEDELKKED 603
K +E +KE+
Sbjct: 375 KEADDRQREEARKEE 389
Score = 31.5 bits (68), Expect = 0.59
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +1
Query: 382 AKKNTTKELEERRLSSPRKKELENRGLSNLRKGERTIIKHAEEGAVEDRGIKLAEGTGRK 561
A++ KE+E+RR+ KKE E + ++ E +K + ++R K A+ R+
Sbjct: 328 AEEKKAKEIEQRRMEEEIKKEEEKK----RKEAEEKRVKEEQIRLEKERKRKEADDRQRE 383
Query: 562 RTIKPAEDELKKE 600
K E++ K+E
Sbjct: 384 EARKEEEEKRKRE 396
>SB_53623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 223
Score = 35.1 bits (77), Expect = 0.048
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = -3
Query: 224 ILHSSAIAVFFLPASSASLIVFFLPTPSSASLLVFFLPAPSADLIVFFFQLLRP 63
++H+ I VF +P L+VF +P L+VF +P DLIVF L+ P
Sbjct: 32 LVHTDLI-VFVIPLLYPDLVVFVIPLVHP-DLIVFVIPLVYPDLIVFVIPLVHP 83
Score = 34.3 bits (75), Expect = 0.084
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -3
Query: 206 IAVFFLPASSASLIVFFLPTPSSASLLVFFLPAPSADLIVFFFQLLRP 63
+ VF +P LIVF +P + L+VF +P DL+VF L+ P
Sbjct: 13 LIVFVIPLVYPDLIVFVIPLVHT-DLIVFVIPLLYPDLVVFVIPLVHP 59
Score = 34.3 bits (75), Expect = 0.084
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -3
Query: 206 IAVFFLPASSASLIVFFLPTPSSASLLVFFLPAPSADLIVFFFQLLRP 63
+ VF +P LIVF +P L+VF +P DLIVF L+ P
Sbjct: 49 LVVFVIPLVHPDLIVFVIPLVYP-DLIVFVIPLVHPDLIVFVIPLVYP 95
Score = 34.3 bits (75), Expect = 0.084
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 206 IAVFFLPASSASLIVFFLPTPS-SASLLVFFLPAPSADLIVFFFQLLRP 63
+ VF +P LIVF +P L+VF +P + D+IVF L+ P
Sbjct: 121 LIVFVIPLVYPDLIVFVIPLSLVHPDLIVFVIPLVNPDMIVFVIALVHP 169
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -3
Query: 224 ILHSSAIAVFFLPASSASLIVFFLPTPSSASLLVFFLPAPSADLIVFFFQLLRP 63
++H I VF +P LIVF +P L+VF +P DLIVF L+ P
Sbjct: 56 LVHPDLI-VFVIPLVYPDLIVFVIPLVHP-DLIVFVIPLVYPDLIVFVIPLVYP 107
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -3
Query: 206 IAVFFLPASSASLIVFFLPTPSSASLLVFFLPAPSADLIVFFFQLLRP 63
+ VF +P LIVF +P L+VF +P DLIVF L+ P
Sbjct: 73 LIVFVIPLVHPDLIVFVIPLVYP-DLIVFVIPLVYPDLIVFVIPLVYP 119
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -3
Query: 224 ILHSSAIAVFFLPASSASLIVFFLPTPSSASLLVFFLPAPSADLIVFFFQLLRP 63
++H I VF +P LIVF +P L+VF +P DLIVF L+ P
Sbjct: 80 LVHPDLI-VFVIPLVYPDLIVFVIPLVYP-DLIVFVIPLVYPDLIVFVIPLVYP 131
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = -3
Query: 200 VFFLPASSASLIVFFLPTPSSASLLVFFLPAPSADLIVFFFQLLRP 63
VF + LIVF +P L+VF +P DLIVF LL P
Sbjct: 3 VFVIALVHPYLIVFVIPLVYP-DLIVFVIPLVHTDLIVFVIPLLYP 47
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -3
Query: 200 VFFLPASSASLIVFFLPTPSSASLLVFFLPAPSADLIVFFFQLLRP 63
VF + LIVF +P + ++VF +P DLIV LL P
Sbjct: 161 VFVIALVHPDLIVFVIPLVNP-DMIVFVIPLVHTDLIVLVIPLLYP 205
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -3
Query: 206 IAVFFLPASSA--SLIVFFLPTPSSASLLVFFLPAPSADLIVFFFQLLRP 63
+ VF +P S LIVF +P + ++VF + DLIVF L+ P
Sbjct: 133 LIVFVIPLSLVHPDLIVFVIPLVNP-DMIVFVIALVHPDLIVFVIPLVNP 181
>SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 999
Score = 33.5 bits (73), Expect = 0.15
Identities = 35/128 (27%), Positives = 61/128 (47%)
Frame = +3
Query: 57 RLRAKELEEKDYQVCRRSWKKED*QACGRRSWKKEDY*ACGRSWKKEDCNRRRMKNTATT 236
RL+AK+ EE++ ++ +RS K+ + KK++ K ++ +++ K
Sbjct: 817 RLKAKKKEEEEKELEKRSKTKDAKKYFESWKSKKDEELKEAHRAKMQELKKQKQKEEEEK 876
Query: 237 EERRLQPPKETNYLWCVGQMIVLLQFLVKSTGASKKERSLTSKKKQACREEKYYQGAGRK 416
+++ L K W + ++L K KK+R T K+KQ EEKY +
Sbjct: 877 QDKTLSSKKSFEN-WKAKKD----EYLKKEL-KEKKKREKTEKEKQ--EEEKY------E 922
Query: 417 KTIKPAEE 440
KTIK A+E
Sbjct: 923 KTIKSADE 930
>SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)
Length = 783
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 315 LVKSTGASKKERSLTSKKKQACREEKYYQGAGRKKTIKPAEEGAGE-QRTIKPA 473
++K+ K E+ KKK+A +E+ A KK KP +EG E + +K A
Sbjct: 265 VIKTAAQKKAEKKEREKKKKAQEKERQKAKAAAKKEEKPEQEGNTEAENEVKKA 318
>SB_32958| Best HMM Match : Transformer (HMM E-Value=2.9)
Length = 253
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/70 (24%), Positives = 28/70 (40%)
Frame = +3
Query: 153 KKEDY*ACGRSWKKEDCNRRRMKNTATTEERRLQPPKETNYLWCVGQMIVLLQFLVKSTG 332
+K + +C R W + +RR + A P E+N W +I + LV G
Sbjct: 120 RKRHFVSCSRRWPRGRASRRDARACAPMMPSAHTPVPESNSAWSASSVIGVAGLLVSLIG 179
Query: 333 ASKKERSLTS 362
+ R L +
Sbjct: 180 LYIRRRELAA 189
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 400 KELEERRLSSPRKKELEN-RGLSNLRKGERTIIKHAEEGAVEDRGIKLAEGTGRKRTIKP 576
K E+ ++ +E E + +L K ER ++ EE ++ + I+ E + T+K
Sbjct: 460 KRFEDEKMKLDEARESEKAKTTQHLTKAER-VLSEMEEIKLKMKAIE-QEKLSLQTTVKS 517
Query: 577 AEDELKKEDYQ 609
EDE+KKE Q
Sbjct: 518 LEDEIKKEKEQ 528
>SB_19234| Best HMM Match : Extensin_2 (HMM E-Value=0.23)
Length = 880
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 13 EERGLPGSGKKEGFQDCGRRSWKKKTIKSAEGAGRKKTNKLAEEGVGRKKTIKLAEEAGR 192
EE + + +G +D + + T KS++ G+KKTN KKTIK A+E +
Sbjct: 202 EEGDDADASESDGEEDTDQAEEPEWTNKSSKATGKKKTNT-------SKKTIKNAKEPKK 254
Query: 193 KKTAI 207
++ A+
Sbjct: 255 RRNAL 259
>SB_54200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/90 (23%), Positives = 37/90 (41%)
Frame = +3
Query: 327 TGASKKERSLTSKKKQACREEKYYQGAGRKKTIKPAEEGAGEQRTIKPAERRKDYHQACG 506
T KK+ K+ + +EE+ +K K E+ G++ K E RK+ G
Sbjct: 733 TQDDKKKEETDGKEDKGAKEEEKGSNEKDEKNTKGEEKDKGKEDKGKDGEERKEKENKHG 792
Query: 507 RRSCGRQRNQACGRNWKKEDYQACGR*AEK 596
+ G Q + R +K+ G+ +K
Sbjct: 793 KVEKGNQDGEGKERKDEKDKNGEDGKGEDK 822
>SB_26305| Best HMM Match : Integrase_Zn (HMM E-Value=9.6)
Length = 222
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 321 KSTGASKKERSLTSKKKQACREEKYYQGAGRKKTIKPAEEGAG---EQRTIKPAERRK 485
+ T ASK + + KQA R + Q + + KTIKP ++ +Q T KP ++ K
Sbjct: 94 RKTKASKPQDQ-DKRDKQAARPRQERQASRKTKTIKPQDQETSKPQDQETSKPQDQDK 150
>SB_46530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 365 KKTSMSRRKILPRSWKKEDYQARGRRSWRTEDYQTC 472
++T S+ K L SW Y AR RR WR C
Sbjct: 84 RRTIASKLKDLGLSWGHAQYLARNRREWRRTILALC 119
>SB_41511| Best HMM Match : SAP (HMM E-Value=2.7e-08)
Length = 993
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3
Query: 327 TGASKKERSLTSKKKQACREEKYYQGAGRKKTIKPAEEGAGEQRTIKPAERRK 485
TG SKK RS SK++ A + AG+ P G+GE ++ + A +R+
Sbjct: 272 TGKSKKSRSKASKRRSANTQPARSDSAGKG---SPTSIGSGENQSEEIAMQRR 321
>SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 344
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +3
Query: 333 ASKKERSLTSKKKQACREEKYYQGAGRKKTIKPAEEGAGEQRTIKPAERRKDYHQACGRR 512
A++ + K+QA R ++ Q + KTIKP + G+Q RK QA R
Sbjct: 181 AARPRQESRKNKRQAARPKR--QATCKTKTIKPQPQDQGKQAARPRQASRKTKRQA--NR 236
Query: 513 SCGRQRNQ 536
RQ N+
Sbjct: 237 KTKRQANR 244
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/55 (21%), Positives = 30/55 (54%)
Frame = +3
Query: 324 STGASKKERSLTSKKKQACREEKYYQGAGRKKTIKPAEEGAGEQRTIKPAERRKD 488
+ A K + + +KK++ ++E+ + G++ T K + E+R + ER+++
Sbjct: 945 AAAADKPKEEVNKQKKESDKQEESKENEGKEMTRKEKRKKIKEERNRRKKERKRE 999
>SB_15121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = -3
Query: 206 IAVFFLPASSA--SLIVFFLPTPSSASLLVFFLPA--PSADLIVFFFQLLRP 63
I +F+LP + +F+LPT +V +LP P +++F+ L P
Sbjct: 220 IVIFYLPTLRPVMRIAIFYLPTLRPVMRIVIYLPTLLPVMRIVIFYLPTLLP 271
>SB_14151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = +3
Query: 495 QACGRRSCGRQRNQACGRNWKKEDYQACGR*AEKRGLSSLW 617
QACG R R QACG + QACG SSLW
Sbjct: 59 QACGPRVT-RLTTQACGPRVTRLTTQACGPRGNTTHNSSLW 98
>SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1)
Length = 566
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +3
Query: 333 ASKKERSLTSKKKQACREEKYYQGAGRKKTIKPAEEGAGEQ---RTIKPAERR 482
AS+K + TSK K++ ++K + +KT KP ++ A Q +T KP E++
Sbjct: 184 ASRKTK--TSKTKRSKPQDKQAERQASRKTSKPKDKQAARQASRKTSKPQEKQ 234
>SB_56920| Best HMM Match : T-box (HMM E-Value=2.9e-13)
Length = 263
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 135 CGRRSWKKEDY*ACGRSWKKEDCNRRRMKNTATTEERRLQPPK---ETNYLW 281
CG+ K ED G + + DC RR+++NTA L P+ E LW
Sbjct: 33 CGQVDDKSEDE---GHTDNETDCKRRKLENTAGRSASELTRPEAVLEGRELW 81
>SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1560
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 435 EEGAGEQRTIKPAERRKDYHQACGRRSCGRQRNQ 536
E+ Q+ +K ERRK +HQ+ R + G +N+
Sbjct: 1006 EKDTSHQQRVKELERRKQHHQSQLRPTLGHPQNR 1039
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 435 EEGAGEQRTIKPAERRKDYHQACGRRSCGRQRNQ 536
E+ Q+ +K ERRK +HQ+ R + G +N+
Sbjct: 1142 EKDTSHQQRVKELERRKQHHQSQLRPTLGHPQNR 1175
>SB_31725| Best HMM Match : Linker_histone (HMM E-Value=1.5e-37)
Length = 184
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 321 KSTGASKKERSLTSKK--KQACREEKYYQGAGRKKTIKPAEEGAGEQRTIKPAERR 482
K A K + +KK K+A ++ + A +K T KPA + A + KPA ++
Sbjct: 112 KKPAAKKSPKKAAAKKSPKKAAKKPAAKKPAAKKATKKPAAKKAAAKPAKKPAAKK 167
>SB_25704| Best HMM Match : Linker_histone (HMM E-Value=8.3e-37)
Length = 184
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 321 KSTGASKKERSLTSKK--KQACREEKYYQGAGRKKTIKPAEEGAGEQRTIKPAERR 482
K A K + +KK K+A ++ + A +K T KPA + A + KPA ++
Sbjct: 112 KKPAAKKSPKKAAAKKSPKKAAKKPAAKKPAAKKATKKPAAKKAAAKPAKKPAAKK 167
>SB_20145| Best HMM Match : WD40 (HMM E-Value=2.4e-09)
Length = 682
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 327 TGASKKERSLTSKKKQACREEKYYQGAGRKKTIKPAEEGAGEQRTIKPAERRK 485
TG+SKKE+ LT++ + R + Y R + E Q IK E RK
Sbjct: 135 TGSSKKEQKLTNQFNFSERASQTYNNPYRWEIYDAYVEDLERQEKIKEKESRK 187
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 435 EEGAGEQRTI---KPAERRKDYHQACGRRSCGRQRNQACGRNWKKED 566
EEGA E + +PAE K+ + GRR+ R + QA +ED
Sbjct: 917 EEGAAEPEGVADEQPAEEAKEKSKPAGRRASRRGKKQATQVEESQED 963
>SB_50019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 849
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 323 VYGSVEERKIAYLEKKTSMSRRKILPRSWKKEDYQAR 433
+ S+ R++ E + +R I PR+WKKE +AR
Sbjct: 467 ILDSLSIRRLRNWEGDKELKKRGIDPRTWKKERKEAR 503
>SB_29755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 28.7 bits (61), Expect = 4.2
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +1
Query: 388 KNTTKELEERRLSSPRK-----KELENRGLSNLRKGERTIIKHAEEGAVEDRGIKLAEGT 552
++ TK LE+R ++ + K LE+R +S +R +IK A+EDR I E
Sbjct: 191 RHVTKALEDRHVTKALEDRHVTKALEDRRISKALLEDRRVIK-----ALEDRRI-TKELE 244
Query: 553 GRKRTIKPAEDELKKED 603
GR I P ED K +D
Sbjct: 245 GRPMAIAP-EDRRKLKD 260
>SB_24892| Best HMM Match : S-antigen (HMM E-Value=0.037)
Length = 223
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 435 EEGAGEQRTI---KPAERRKDYHQACGRRSCGRQRNQACGRNWKKED 566
EEGA E + +PAE K+ + GRR+ R + QA +ED
Sbjct: 172 EEGAAEPEGVADEQPAEEAKEKSKPAGRRASRRGKKQATQVEESQED 218
>SB_20508| Best HMM Match : Filament (HMM E-Value=0.037)
Length = 722
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +3
Query: 57 RLRAKELEEKDYQVCRRSWKKED*Q-ACGRRSWKKEDY*ACGRSWKKEDCNRRRMK 221
R R KELE +K D AC RR+ ED R WK+E+ R K
Sbjct: 292 RERLKELESMQQSTQNEGEEKGDAVIACIRRAKHYEDTPTQSRKWKREELEVSRQK 347
>SB_38360| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 387
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 487 SFLLSAGLIVLCSPAPSSAGLIVFFLPAPW*YFSSR 380
S ++ L+++ PA SS G+ +++ A W +SSR
Sbjct: 57 SIIIFVALMLIAEPARSSIGIEIWYRYATWFLWSSR 92
>SB_20797| Best HMM Match : SoxE (HMM E-Value=0.046)
Length = 641
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 486 DYHQACGRRSCGRQRNQACGRNWKK 560
DY CG R N CG+N KK
Sbjct: 257 DYQYFCGENDVTRSLNYVCGKNKKK 281
>SB_974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 409 EERRLSSPRKKELENRGLS-NLRKGERTIIKHAEEGAV 519
E + L + ++ ENR L NLRK ERT++ E+G+V
Sbjct: 122 EMKALKTFKRLAKENRQLKLNLRKYERTLLGFYEDGSV 159
>SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2126
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 381 REEKYYQGAGRKKTIKPAEEGAGEQRTIKPAERRKDYHQACGRRSCGRQRNQ 536
++E+Y+ +T AEE A +Q P R+ D H+ CG S GR ++
Sbjct: 752 QDEQYHDATLDGETEYKAEEKARDQVFTFP--RQSDEHRNCGYESQGRSSDE 801
>SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10)
Length = 416
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = -3
Query: 227 SILH----SSAIAVFFLPASSASLIVFF--LPTPSSASLLVFFLPAPSADLIVFFFQLLR 66
SI+H SS+I + P+SS+S+I+ PSS+S ++ P+ S +I+
Sbjct: 194 SIIHHHPSSSSIIIHHHPSSSSSIIIIIHHHHHPSSSSSIIIHHPSSSIIIIIIIHHHHH 253
Query: 65 PQS 57
P S
Sbjct: 254 PSS 256
>SB_37178| Best HMM Match : fn3 (HMM E-Value=4.7e-08)
Length = 961
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 445 LENRGLSNLRKGERTIIKHA-EEGAVEDRGIKLAEGTGRKRTIKPAE 582
LE+RG+ + +R I E+ +EDRGI++ +G G P E
Sbjct: 478 LEDRGIEDRGIEDRGIEDRGIEDRGIEDRGIEMFQGGGGPLRFSPWE 524
>SB_35913| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1176
Score = 27.9 bits (59), Expect = 7.3
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 6/153 (3%)
Frame = +3
Query: 84 KDYQVCRRSWKKED*QACGRRSWKKEDY*ACGRSWKKEDCNRRRMKNTATT--EERRLQP 257
+D RRS K + Q G K E + G K NRR + T+ T R L P
Sbjct: 989 RDASRARRSATKIEHQGNGETDKKYEKFFEPGELEKMRLKNRRSLSATSLTIRPGRALTP 1048
Query: 258 PKETNYLWCVGQMIVLLQFLVKSTGASKKERSL---TSKKKQACREEKYYQGAG-RKKTI 425
+++ +W V + ++ Q + + + L S K + ++Y G G + +
Sbjct: 1049 ANQSSRMW-VAETLIAAQTSTVTRAYPQVTQQLYMQGSLKSVRAKPQEYLAGRGVVHRDL 1107
Query: 426 KPAEEGAGEQRTIKPAERRKDYHQACGRRSCGR 524
GE++ +K ++ +RS G+
Sbjct: 1108 AARNILVGEEKVLKISDFGLSREGVYVKRSTGK 1140
>SB_33615| Best HMM Match : PA (HMM E-Value=9e-16)
Length = 629
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 344 RKIAYLEKKTSMSRRKILPRSWKKEDYQARGRRSWRTEDYQ 466
R L KK RR I+ SW E+Y G W E +Q
Sbjct: 281 RGFGKLLKKGWRPRRTIMMCSWDAEEYGLIGSHEWVEEHHQ 321
>SB_27611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 27.9 bits (59), Expect = 7.3
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Frame = +1
Query: 31 GSGKKEGFQDCGRRSWKKKTIKSA----EGAGRK--KTNKLAEEGVGRKKTIKLAE-EAG 189
G G++E R K+K ++S+ EG RK +++ EEG RK+ + E G
Sbjct: 273 GGGREEKGSSLHREGEKRKEVESSSRVGEGEKRKEVESSSRVEEGEKRKEVESSSRVEEG 332
Query: 190 RKKTAIAEE*RILQPPKKEDCNHRRR 267
K+ + R+ + K+++ R
Sbjct: 333 EKRKEVESSSRVEEGEKRKEVESSSR 358
>SB_25716| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 27.9 bits (59), Expect = 7.3
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = +1
Query: 13 EERGLPGSGKKEGFQDCGRRSWKKKTIKSAEGAGR-----KKTNKLAEEGVGRKKTIKLA 177
E G G GK EG +D G+ + K EG G+ K K +G G K
Sbjct: 34 EGEGQKGEGKGEGIKDEGKGEGEGKGDGKGEGGGKGEGEGKGEGKSEGKGEGGGKGDGKG 93
Query: 178 EEAGR 192
EE G+
Sbjct: 94 EEGGK 98
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 324 STGASKKERSLTSKKKQACREEKYYQGAGRKKTIKPAEEGAGEQRTIKPAERRK--DYHQ 497
S+ KK+ S + ++K+ +++K GRK + PA + KPA + D
Sbjct: 484 SSKEEKKQESSSKEEKKQEKDDKKDDKEGRKASKSPAPRSDSRKEKEKPAPLKSELDIRY 543
Query: 498 ACGRR 512
+C R
Sbjct: 544 SCETR 548
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +1
Query: 394 TTKELEERRLSSPRKKELENRGLSNLRKGERTIIKHAEEGAVEDRGIKLAEGTGRKRTIK 573
T KE + + + SP++ +L + GE TI+ + EG+ +KL E K ++
Sbjct: 601 TDKEKKAKMMDSPQEDDLPGDEEMAVSGGESTIVPPSMEGSTFTDIVKLLE--DEKYGLE 658
Query: 574 PAEDELKKEDYQACGR 621
D L KE GR
Sbjct: 659 RRLDILVKERKNLQGR 674
>SB_42793| Best HMM Match : PARP (HMM E-Value=5.4e-22)
Length = 585
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +3
Query: 360 SKKKQACREEKYYQGAGRKKTIKPAEEGAGEQRTIKPAERRKDYHQACGRR--SCGRQRN 533
S KK+ C E+ ++ +K+ + G R + E + CGR CG
Sbjct: 94 SSKKKKCSEKITWK-CDKKEKFTKKDCGHELFRICQQKEEDVVCNVPCGRNRPGCGHPCT 152
Query: 534 QACGRNWKKEDYQACGR 584
CG + K D + C R
Sbjct: 153 NLCGEDCSKGDCKLCER 169
>SB_18627| Best HMM Match : Histone (HMM E-Value=1.7e-30)
Length = 279
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +3
Query: 333 ASKKERSLTSKK---KQACREEKYYQGAGRKKTIKPAEEGAGEQRTIKPAERR 482
A+KK +KK K+ ++ + A +K KPA++ A ++ T KPA ++
Sbjct: 219 AAKKSPKKAAKKPAAKKPAAKKAAKKPAAKKAAAKPAKKPAAKKATKKPAAKK 271
>SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2578
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +3
Query: 360 SKKKQACREEKYYQGAGRKKTIKPAEEGAGEQRTIKPAERRKDYHQACGRR--SCGRQRN 533
S KK+ C E+ ++ +K+ + G R + E + CGR CG
Sbjct: 1274 SSKKKKCSEKITWK-CDKKEKFTKKDCGHELFRICQQKEEDVVCNVPCGRNRPGCGHPCT 1332
Query: 534 QACGRNWKKEDYQACGR 584
CG + K D + C R
Sbjct: 1333 NLCGEDCSKGDCKLCER 1349
>SB_44477| Best HMM Match : IBR (HMM E-Value=0.00086)
Length = 627
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +3
Query: 501 CGRRSCGRQRNQACGRNWKKEDYQACGR*AEKRGLSSLWKKYDNR 635
C + CG++ + C NW C EK+G L Y+ R
Sbjct: 479 CLNQKCGKETCRHCKENWSDHFGLKCSE-IEKKGEKDLRISYEER 522
>SB_30056| Best HMM Match : Linker_histone (HMM E-Value=2.4e-37)
Length = 184
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +3
Query: 333 ASKKERSLTSKK---KQACREEKYYQGAGRKKTIKPAEEGAGEQRTIKPAERR 482
A+KK +KK K+ ++ + A +K KPA++ A ++ T KPA ++
Sbjct: 124 AAKKSPKKAAKKPAAKKPAAKKAAKKPAAKKAAAKPAKKPAAKKATKKPAAKK 176
>SB_6600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +2
Query: 362 EKKTSMSRRKILPRSWKKEDYQARGRRSWRTE---DYQTCGKEK--GLSSSMRKKELW 520
E++ RRK R ++ + R RR WR E D + G+EK G++ R++ W
Sbjct: 182 ERRKWRQRRKWRQRRKWRQRRKWRQRRKWRREGSGDREGSGEEKEVGMTRKWRQRRKW 239
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,088,361
Number of Sequences: 59808
Number of extensions: 372842
Number of successful extensions: 1815
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1798
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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