Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_I05
(586 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 149 3e-36
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 149 3e-36
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 149 3e-36
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 149 3e-36
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 149 3e-36
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 149 3e-36
M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-relate... 148 5e-36
U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type ... 120 2e-27
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA... 120 2e-27
DQ780943-1|ABH07113.1| 910|Drosophila melanogaster prominin pro... 29 3.5
BT029279-1|ABK30916.1| 1066|Drosophila melanogaster IP13255p pro... 29 3.5
AE013599-3867|AAM68313.1| 670|Drosophila melanogaster CG30164-P... 29 3.5
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 149 bits (361), Expect = 3e-36
Identities = 62/111 (55%), Positives = 76/111 (68%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQT+++P CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECNG
Sbjct: 1665 HSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAK 1724
Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNTT 333
GTCH + SFW+ +E SQ F P++QT+K+G VSRC VC+KN++
Sbjct: 1725 GTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMKNSS 1775
Score = 56.4 bits (130), Expect = 3e-08
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQ+ +P C G +ELW GYS +++ L GSC+ F +P + C G+
Sbjct: 1560 HSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC-GQN 1614
Query: 181 GTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318
C++ + N +FWLTT A+P +++ + + +SRC VC
Sbjct: 1615 NVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1655
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 149 bits (361), Expect = 3e-36
Identities = 62/111 (55%), Positives = 76/111 (68%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQT+++P CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECNG
Sbjct: 1665 HSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAK 1724
Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNTT 333
GTCH + SFW+ +E SQ F P++QT+K+G VSRC VC+KN++
Sbjct: 1725 GTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMKNSS 1775
Score = 56.4 bits (130), Expect = 3e-08
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQ+ +P C G +ELW GYS +++ L GSC+ F +P + C G+
Sbjct: 1560 HSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC-GQN 1614
Query: 181 GTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318
C++ + N +FWLTT A+P +++ + + +SRC VC
Sbjct: 1615 NVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1655
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 149 bits (361), Expect = 3e-36
Identities = 62/111 (55%), Positives = 76/111 (68%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQT+++P CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECNG
Sbjct: 1665 HSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAK 1724
Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNTT 333
GTCH + SFW+ +E SQ F P++QT+K+G VSRC VC+KN++
Sbjct: 1725 GTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMKNSS 1775
Score = 56.4 bits (130), Expect = 3e-08
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQ+ +P C G +ELW GYS +++ L GSC+ F +P + C G+
Sbjct: 1560 HSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC-GQN 1614
Query: 181 GTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318
C++ + N +FWLTT A+P +++ + + +SRC VC
Sbjct: 1615 NVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1655
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 149 bits (361), Expect = 3e-36
Identities = 62/111 (55%), Positives = 76/111 (68%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQT+++P CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECNG
Sbjct: 1669 HSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAK 1728
Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNTT 333
GTCH + SFW+ +E SQ F P++QT+K+G VSRC VC+KN++
Sbjct: 1729 GTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMKNSS 1779
Score = 66.9 bits (156), Expect = 2e-11
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQ+ +P C G +ELW GYS +++ L SPGSC+ F +P + C G+
Sbjct: 1561 HSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSC-GQN 1618
Query: 181 GTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318
C++ + N +FWLTT A+P +++ + + +SRC VC
Sbjct: 1619 NVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1659
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 149 bits (361), Expect = 3e-36
Identities = 62/111 (55%), Positives = 76/111 (68%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQT+++P CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECNG
Sbjct: 1669 HSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAK 1728
Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNTT 333
GTCH + SFW+ +E SQ F P++QT+K+G VSRC VC+KN++
Sbjct: 1729 GTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMKNSS 1779
Score = 66.9 bits (156), Expect = 2e-11
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQ+ +P C G +ELW GYS +++ L SPGSC+ F +P + C G+
Sbjct: 1561 HSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSC-GQN 1618
Query: 181 GTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318
C++ + N +FWLTT A+P +++ + + +SRC VC
Sbjct: 1619 NVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1659
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 149 bits (361), Expect = 3e-36
Identities = 62/111 (55%), Positives = 76/111 (68%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQT+++P CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECNG
Sbjct: 1669 HSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAK 1728
Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNTT 333
GTCH + SFW+ +E SQ F P++QT+K+G VSRC VC+KN++
Sbjct: 1729 GTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMKNSS 1779
Score = 66.9 bits (156), Expect = 2e-11
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQ+ +P C G +ELW GYS +++ L SPGSC+ F +P + C G+
Sbjct: 1561 HSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSC-GQN 1618
Query: 181 GTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318
C++ + N +FWLTT A+P +++ + + +SRC VC
Sbjct: 1619 NVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1659
>M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-related
collagen protein.
Length = 421
Score = 148 bits (359), Expect = 5e-36
Identities = 62/111 (55%), Positives = 76/111 (68%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQT+++P CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECNG
Sbjct: 311 HSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAK 370
Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNTT 333
GTCH + SFW+ +E SQ F P++QT+K+G VSRC VC+KN++
Sbjct: 371 GTCHFYETITSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMKNSS 421
Score = 56.4 bits (130), Expect = 3e-08
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQ+ +P C G +ELW GYS +++ L GSC+ F +P + C G+
Sbjct: 206 HSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC-GQN 260
Query: 181 GTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318
C++ + N +FWLTT A+P +++ + + +SRC VC
Sbjct: 261 NVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 301
>U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type IV
alpha 2 protein.
Length = 1761
Score = 120 bits (288), Expect = 2e-27
Identities = 53/106 (50%), Positives = 67/106 (63%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQ++ IP CP GW E+W GYS+ M T L SPGSCLE+FRA P IEC+G
Sbjct: 1629 HSQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVSPGSCLEEFRAQPVIECHGH- 1687
Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318
G C+++ SFWLT IE+ QF P +QTLK+ ++SRC VC
Sbjct: 1688 GRCNYYDALASFWLTVIEEQDQFVQPRQQTLKAD-FTSKISRCTVC 1732
Score = 57.6 bits (133), Expect = 1e-08
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQ++ +P CP + LW GYS + L GSC+ F +P++ C+
Sbjct: 1519 HSQSVHVPQCPANTNLLWEGYS-LSGNVAASRAVGQDLGQSGSCMMRFTTMPYMLCD-IT 1576
Query: 181 GTCHHFA--NKLSFWLTTIEDSQQFAMPERQTLKSGR-LLERVSRCAVCIKNT 330
C HFA N S WL+T E MP T GR L++ +SRC VC T
Sbjct: 1577 NVC-HFAQNNDDSLWLSTAE-----PMPMTMTPIQGRDLMKYISRCVVCETTT 1623
>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
protein.
Length = 1940
Score = 120 bits (288), Expect = 2e-27
Identities = 53/106 (50%), Positives = 67/106 (63%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQ++ IP CP GW E+W GYS+ M T L SPGSCLE+FRA P IEC+G
Sbjct: 1631 HSQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVSPGSCLEEFRAQPVIECHGH- 1689
Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318
G C+++ SFWLT IE+ QF P +QTLK+ ++SRC VC
Sbjct: 1690 GRCNYYDALASFWLTVIEEQDQFVQPRQQTLKAD-FTSKISRCTVC 1734
Score = 57.6 bits (133), Expect = 1e-08
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +1
Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180
HSQ++ +P CP + LW GYS + L GSC+ F +P++ C+
Sbjct: 1521 HSQSVHVPQCPANTNLLWEGYS-LSGNVAASRAVGQDLGQSGSCMMRFTTMPYMLCD-IT 1578
Query: 181 GTCHHFA--NKLSFWLTTIEDSQQFAMPERQTLKSGR-LLERVSRCAVCIKNT 330
C HFA N S WL+T E MP T GR L++ +SRC VC T
Sbjct: 1579 NVC-HFAQNNDDSLWLSTAE-----PMPMTMTPIQGRDLMKYISRCVVCETTT 1625
>DQ780943-1|ABH07113.1| 910|Drosophila melanogaster prominin
protein.
Length = 910
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -2
Query: 387 IRGQISIWLLRTLSLFALCGVFDTNCTSGYTF*ETSRLKCLSLWHSKLLAVFD---GGQP 217
I G + +W++ + + C + ++N SG F L CL+ + VF GG
Sbjct: 467 IAGTVIVWVMLFMLMSYCCFLCESNAKSGVVFFIAVMLICLASICLTIFGVFSLAVGGNA 526
Query: 216 ETEFICK 196
E F+C+
Sbjct: 527 EV-FVCR 532
>BT029279-1|ABK30916.1| 1066|Drosophila melanogaster IP13255p
protein.
Length = 1066
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -2
Query: 387 IRGQISIWLLRTLSLFALCGVFDTNCTSGYTF*ETSRLKCLSLWHSKLLAVFD---GGQP 217
I G + +W++ + + C + ++N SG F L CL+ + VF GG
Sbjct: 468 IAGTVIVWVMLFMLMSYCCFLCESNAKSGVVFFIAVMLICLASICLTIFGVFSLAVGGNA 527
Query: 216 ETEFICK 196
E F+C+
Sbjct: 528 EV-FVCR 533
>AE013599-3867|AAM68313.1| 670|Drosophila melanogaster CG30164-PA
protein.
Length = 670
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -2
Query: 387 IRGQISIWLLRTLSLFALCGVFDTNCTSGYTF*ETSRLKCLSLWHSKLLAVFD---GGQP 217
I G + +W++ + + C + ++N SG F L CL+ + VF GG
Sbjct: 448 IAGTVIVWVMLFMLMSYCCFLCESNAKSGVVFFIAVMLICLASICLTIFGVFSLAVGGNA 507
Query: 216 ETEFICK 196
E F+C+
Sbjct: 508 EV-FVCR 513
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,426,989
Number of Sequences: 53049
Number of extensions: 491113
Number of successful extensions: 956
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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