BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0002_I05 (586 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 173 1e-43 U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 173 1e-43 J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV) co... 173 1e-43 Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 170 7e-43 Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 170 7e-43 U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 170 7e-43 Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 142 2e-34 Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 142 2e-34 X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 139 1e-33 J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 139 1e-33 U61955-9|AAC24409.3| 371|Caenorhabditis elegans Hypothetical pr... 29 2.4 AL031630-20|CAE17995.1| 122|Caenorhabditis elegans Hypothetical... 28 4.2 U14635-13|AAC46654.2| 322|Caenorhabditis elegans Hypothetical p... 28 5.6 >U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2, isoform a protein. Length = 1758 Score = 173 bits (420), Expect = 1e-43 Identities = 73/110 (66%), Positives = 83/110 (75%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQT+ IP CP GWS LWIGYSF MHT L+SPGSCLEDFRA PFIECNG Sbjct: 1645 HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGAR 1704 Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 330 G+CH+FANK SFWLTTI++ +F +PE QTLKSG L RVSRC VC+K+T Sbjct: 1705 GSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVCVKST 1754 Score = 66.9 bits (156), Expect = 1e-11 Identities = 36/106 (33%), Positives = 54/106 (50%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C+ Sbjct: 1537 HSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNN 1595 Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318 + N S+WL+T E + ER+ + +SRCAVC Sbjct: 1596 VCNYASRNDKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 1635 >U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2, isoform b protein. Length = 1759 Score = 173 bits (420), Expect = 1e-43 Identities = 73/110 (66%), Positives = 83/110 (75%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQT+ IP CP GWS LWIGYSF MHT L+SPGSCLEDFRA PFIECNG Sbjct: 1646 HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGAR 1705 Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 330 G+CH+FANK SFWLTTI++ +F +PE QTLKSG L RVSRC VC+K+T Sbjct: 1706 GSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVCVKST 1755 Score = 66.9 bits (156), Expect = 1e-11 Identities = 36/106 (33%), Positives = 54/106 (50%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C+ Sbjct: 1538 HSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNN 1596 Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318 + N S+WL+T E + ER+ + +SRCAVC Sbjct: 1597 VCNYASRNDKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 1636 >J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV) collagen protein. Length = 261 Score = 173 bits (420), Expect = 1e-43 Identities = 73/110 (66%), Positives = 83/110 (75%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQT+ IP CP GWS LWIGYSF MHT L+SPGSCLEDFRA PFIECNG Sbjct: 148 HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGAR 207 Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 330 G+CH+FANK SFWLTTI++ +F +PE QTLKSG L RVSRC VC+K+T Sbjct: 208 GSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVCVKST 257 Score = 67.7 bits (158), Expect = 6e-12 Identities = 36/106 (33%), Positives = 55/106 (51%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C+ Sbjct: 40 HSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNN 98 Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318 + N+ S+WL+T E + ER+ + +SRCAVC Sbjct: 99 VCNYASRNEKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 138 >Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen protein. Length = 1759 Score = 170 bits (413), Expect = 7e-43 Identities = 72/110 (65%), Positives = 82/110 (74%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQT+ IP CP GWS LWIGYSF MHT +SPGSCLEDFRA PFIECNG Sbjct: 1646 HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGAR 1705 Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 330 G+CH+FANK SFWLTTI++ +F +PE QTLKSG L RVSRC VC+K+T Sbjct: 1706 GSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVCVKST 1755 Score = 67.7 bits (158), Expect = 6e-12 Identities = 36/106 (33%), Positives = 55/106 (51%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C+ Sbjct: 1538 HSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNN 1596 Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318 + N+ S+WL+T E + ER+ + +SRCAVC Sbjct: 1597 VCNYASRNEKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 1636 >Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen protein. Length = 1758 Score = 170 bits (413), Expect = 7e-43 Identities = 72/110 (65%), Positives = 82/110 (74%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQT+ IP CP GWS LWIGYSF MHT +SPGSCLEDFRA PFIECNG Sbjct: 1645 HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGAR 1704 Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 330 G+CH+FANK SFWLTTI++ +F +PE QTLKSG L RVSRC VC+K+T Sbjct: 1705 GSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVCVKST 1754 Score = 67.7 bits (158), Expect = 6e-12 Identities = 36/106 (33%), Positives = 55/106 (51%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C+ Sbjct: 1537 HSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNN 1595 Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318 + N+ S+WL+T E + ER+ + +SRCAVC Sbjct: 1596 VCNYASRNEKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 1635 >U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen protein. Length = 1795 Score = 170 bits (413), Expect = 7e-43 Identities = 72/110 (65%), Positives = 82/110 (74%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQT+ IP CP GWS LWIGYSF MHT +SPGSCLEDFRA PFIECNG Sbjct: 1682 HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGAR 1741 Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 330 G+CH+FANK SFWLTTI++ +F +PE QTLKSG L RVSRC VC+K+T Sbjct: 1742 GSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVCVKST 1791 Score = 67.7 bits (158), Expect = 6e-12 Identities = 36/106 (33%), Positives = 55/106 (51%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C+ Sbjct: 1574 HSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNN 1632 Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318 + N+ S+WL+T E + ER+ + +SRCAVC Sbjct: 1633 VCNYASRNEKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 1672 >Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein K04H4.1b protein. Length = 1502 Score = 142 bits (344), Expect = 2e-34 Identities = 60/109 (55%), Positives = 75/109 (68%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQ +P CP GWS +W GYSFVMHT L SPGSCLE+FRA+PFIEC+G Sbjct: 1394 HSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGR- 1452 Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKN 327 GTC+++A FWL+ ++ +QF P QTLK+G L +RVSRC VC+KN Sbjct: 1453 GTCNYYATNHGFWLSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVCLKN 1501 Score = 74.1 bits (174), Expect = 7e-14 Identities = 42/107 (39%), Positives = 52/107 (48%), Gaps = 1/107 (0%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN Sbjct: 1284 HSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN-MN 1341 Query: 181 GTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318 CH N SFWL+T E P T + +SRCAVC Sbjct: 1342 SVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT----AIRPYISRCAVC 1384 >Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein K04H4.1a protein. Length = 1759 Score = 142 bits (344), Expect = 2e-34 Identities = 60/109 (55%), Positives = 75/109 (68%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQ +P CP GWS +W GYSFVMHT L SPGSCLE+FRA+PFIEC+G Sbjct: 1651 HSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGR- 1709 Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKN 327 GTC+++A FWL+ ++ +QF P QTLK+G L +RVSRC VC+KN Sbjct: 1710 GTCNYYATNHGFWLSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVCLKN 1758 Score = 74.1 bits (174), Expect = 7e-14 Identities = 42/107 (39%), Positives = 52/107 (48%), Gaps = 1/107 (0%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN Sbjct: 1541 HSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN-MN 1598 Query: 181 GTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318 CH N SFWL+T E P T + +SRCAVC Sbjct: 1599 SVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT----AIRPYISRCAVC 1641 >X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen protein. Length = 1758 Score = 139 bits (337), Expect = 1e-33 Identities = 59/109 (54%), Positives = 74/109 (67%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQ +P CP GWS +W GYSFVMHT L SPGSCLE+FRA+PFIEC+G Sbjct: 1650 HSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGR- 1708 Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKN 327 GTC+++A FW + ++ +QF P QTLK+G L +RVSRC VC+KN Sbjct: 1709 GTCNYYATNHGFWPSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVCLKN 1757 Score = 74.1 bits (174), Expect = 7e-14 Identities = 42/107 (39%), Positives = 52/107 (48%), Gaps = 1/107 (0%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN Sbjct: 1540 HSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN-MN 1597 Query: 181 GTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318 CH N SFWL+T E P T + +SRCAVC Sbjct: 1598 SVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT----AIRPYISRCAVC 1640 >J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. Length = 313 Score = 139 bits (337), Expect = 1e-33 Identities = 59/109 (54%), Positives = 74/109 (67%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQ +P CP GWS +W GYSFVMHT L SPGSCLE+FRA+PFIEC+G Sbjct: 205 HSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGR- 263 Query: 181 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKN 327 GTC+++A FW + ++ +QF P QTLK+G L +RVSRC VC+KN Sbjct: 264 GTCNYYATNHGFWPSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVCLKN 312 Score = 74.1 bits (174), Expect = 7e-14 Identities = 42/107 (39%), Positives = 52/107 (48%), Gaps = 1/107 (0%) Frame = +1 Query: 1 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 180 HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN Sbjct: 95 HSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN-MN 152 Query: 181 GTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 318 CH N SFWL+T E P T + +SRCAVC Sbjct: 153 SVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT----AIRPYISRCAVC 195 >U61955-9|AAC24409.3| 371|Caenorhabditis elegans Hypothetical protein M03D4.6 protein. Length = 371 Score = 29.1 bits (62), Expect = 2.4 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = +2 Query: 281 DVS*NVYPDVQFVS-KTPHSANKLKVLNNQMLI*PLMQYLFKIQKKLIDHICNTLFKFLV 457 DV V P++ S ++ A K+K +N + + + + F I K+ C+++FK L Sbjct: 158 DVFGQVMPEILLNSLRSARKARKIKPMNIVIYLCGMSESRFSIVKEEYVRNCHSVFKTLG 217 Query: 458 INYSQETTL 484 YS + T+ Sbjct: 218 EKYSPQLTI 226 >AL031630-20|CAE17995.1| 122|Caenorhabditis elegans Hypothetical protein Y38H6C.23 protein. Length = 122 Score = 28.3 bits (60), Expect = 4.2 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Frame = +1 Query: 112 LASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLK--SGR 285 L PG C+ED ++ I C E C+ N + + D+QQ M Q L S R Sbjct: 48 LCGPGKCMEDPKSTTPIRCVCE--KCYIDKNGRAVYPGESTDNQQAPMNSEQQLDRLSDR 105 Query: 286 LLERVSR 306 L++ SR Sbjct: 106 QLQQQSR 112 >U14635-13|AAC46654.2| 322|Caenorhabditis elegans Hypothetical protein C27H5.6 protein. Length = 322 Score = 27.9 bits (59), Expect = 5.6 Identities = 14/48 (29%), Positives = 22/48 (45%) Frame = -2 Query: 288 ETSRLKCLSLWHSKLLAVFDGGQPETEFICKVMASTTFTVTFYKWYRS 145 +TS +C++ + + +F G P T F C + V WYRS Sbjct: 84 DTSSSQCMTAYLWPVFLLFGGQLPAT-FHCLLTVERVLAVNRVSWYRS 130 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,352,866 Number of Sequences: 27780 Number of extensions: 269336 Number of successful extensions: 627 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 600 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 613 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1226509528 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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