Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_I02
(525 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 207 1e-52
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 199 4e-50
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 181 1e-44
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 172 5e-42
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 165 5e-40
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 164 1e-39
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 163 3e-39
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 159 3e-38
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 155 4e-37
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 155 6e-37
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 135 7e-31
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 133 2e-30
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 131 8e-30
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 129 4e-29
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 129 4e-29
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 118 1e-25
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 105 8e-22
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 79 8e-14
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 79 8e-14
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 76 4e-13
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 74 2e-12
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 66 6e-10
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 61 2e-08
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 59 5e-08
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 55 1e-06
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 55 1e-06
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 48 1e-04
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 46 7e-04
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 44 0.002
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 42 0.007
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.11
UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1; ... 38 0.19
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 0.75
UniRef50_Q5KIH1 Cluster: Putative uncharacterized protein; n=1; ... 36 0.75
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 35 1.00
UniRef50_A2R4J7 Cluster: Similarity to other proteins; n=11; Eur... 34 1.7
UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA meth... 33 3.0
UniRef50_UPI0000EBD2B3 Cluster: PREDICTED: hypothetical protein;... 33 4.0
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 4.0
UniRef50_UPI0000DD80EA Cluster: PREDICTED: hypothetical protein;... 33 5.3
UniRef50_Q47KQ6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 33 5.3
UniRef50_UPI0000F2DA02 Cluster: PREDICTED: similar to ZP1; n=1; ... 32 7.0
UniRef50_UPI0000F200AE Cluster: PREDICTED: hypothetical protein;... 32 7.0
UniRef50_Q21YT9 Cluster: Putative uncharacterized protein; n=1; ... 32 7.0
UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Re... 32 7.0
UniRef50_Q6SI22 Cluster: NHL repeat domain protein; n=1; uncultu... 32 9.3
UniRef50_Q9XIL4 Cluster: Mutator-like transposase; n=1; Arabidop... 32 9.3
UniRef50_Q6VY42 Cluster: Putative uncharacterized protein; n=1; ... 32 9.3
UniRef50_A6R052 Cluster: Putative uncharacterized protein; n=1; ... 32 9.3
UniRef50_Q96L96 Cluster: Alpha-protein kinase 3; n=4; Eutheria|R... 32 9.3
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 207 bits (506), Expect = 1e-52
Identities = 97/153 (63%), Positives = 112/153 (73%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAG 244
++ ARPL+SVYSEK E +G ++ LP VFKAPIRPD+VN VH ++ KN RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 245 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 424
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 425 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPL 523
++GH +E++PELPL
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPL 152
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 199 bits (485), Expect = 4e-50
Identities = 94/155 (60%), Positives = 110/155 (70%)
Frame = +2
Query: 59 MSLSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKE 238
MSL ARPLVSVY+EK+E ++ LP VFKAPIRPD+VN+VH + +N RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 239 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 418
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 419 XXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPL 523
Q++GH+++ + E PL
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPL 155
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 181 bits (440), Expect = 1e-44
Identities = 85/150 (56%), Positives = 99/150 (66%)
Frame = +2
Query: 74 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 253
+RP VSV S G ++PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 254 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 433
SAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 62 SAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRF 121
Query: 434 XXXXXXXXXXXXXXXQARGHIVEKIPELPL 523
ARGH + ++ E+PL
Sbjct: 122 ATVSALAASGVPALLFARGHQISEVAEVPL 151
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 172 bits (418), Expect = 5e-42
Identities = 79/104 (75%), Positives = 88/104 (84%)
Frame = +2
Query: 92 VYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWG 271
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWG
Sbjct: 127 VYNDKSEPT-DTQIRLPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185
Query: 272 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 403
TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 186 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 165 bits (401), Expect = 5e-40
Identities = 81/153 (52%), Positives = 96/153 (62%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAG 244
++ ARP+VSV+ A +S+PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 245 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 424
HQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 61 HQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTE 120
Query: 425 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPL 523
ARGH + +PELPL
Sbjct: 121 KRHAVAAAIAATGCPSLVMARGHRINNVPELPL 153
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 164 bits (399), Expect = 1e-39
Identities = 81/150 (54%), Positives = 96/150 (64%)
Frame = +2
Query: 74 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 253
ARP VSVYS S+ V G + PLP VF APIR D+V VH +M+KN+RQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVG-TCPLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61
Query: 254 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 433
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRF 121
Query: 434 XXXXXXXXXXXXXXXQARGHIVEKIPELPL 523
+RGH + +PE+PL
Sbjct: 122 AVVSALAASSVPSLVMSRGHQIGNVPEVPL 151
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 163 bits (395), Expect = 3e-39
Identities = 76/151 (50%), Positives = 97/151 (64%)
Frame = +2
Query: 71 VARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQ 250
V RP+VSV+S +E G+++ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 251 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 430
TSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 61 TSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKR 120
Query: 431 XXXXXXXXXXXXXXXXQARGHIVEKIPELPL 523
+RGH VE +PELPL
Sbjct: 121 LALAVSVAATASVPLVMSRGHRVESVPELPL 151
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 159 bits (387), Expect = 3e-38
Identities = 77/149 (51%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
Frame = +2
Query: 80 PLVSVYS-EKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTS 256
PLVSV+S + S V +PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Query: 257 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 436
AESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 65 AESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHA 124
Query: 437 XXXXXXXXXXXXXXQARGHIVEKIPELPL 523
ARGH + ++P++PL
Sbjct: 125 AATAVAATGIVPLVLARGHRISQVPQIPL 153
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 155 bits (377), Expect = 4e-37
Identities = 76/153 (49%), Positives = 92/153 (60%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAG 244
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVG-EVEIPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 245 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 424
++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 60 YETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKE 119
Query: 425 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPL 523
ARGH + + E+PL
Sbjct: 120 KRYAVCSSIAASGITSLVLARGHRISNLKEVPL 152
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 155 bits (376), Expect = 6e-37
Identities = 74/149 (49%), Positives = 94/149 (63%)
Frame = +2
Query: 77 RPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTS 256
RP VSV++ GA+L +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Query: 257 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 436
A SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 63 ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQA 122
Query: 437 XXXXXXXXXXXXXXQARGHIVEKIPELPL 523
+RGH +E + E+P+
Sbjct: 123 LASALAATAVVPVVMSRGHRIEALREVPM 151
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 135 bits (326), Expect = 7e-31
Identities = 65/147 (44%), Positives = 87/147 (59%)
Frame = +2
Query: 83 LVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAE 262
L +VY+ + ++P + +PIRPD+V+ VH++++KN RQP+ AGHQ SAE
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65
Query: 263 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXX 442
SWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 66 SWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMC 125
Query: 443 XXXXXXXXXXXXQARGHIVEKIPELPL 523
ARGH ++ +PELPL
Sbjct: 126 SAIAASSNPSLVLARGHKIDNVPELPL 152
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 133 bits (322), Expect = 2e-30
Identities = 68/144 (47%), Positives = 83/144 (57%)
Frame = +2
Query: 89 SVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESW 268
+VYS ++ L +P VF + IR D+V VH +M KN RQ Y VS AG TSA SW
Sbjct: 5 NVYSCNKNIID--KLKIPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSW 62
Query: 269 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 448
GTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 63 GTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSA 122
Query: 449 XXXXXXXXXXQARGHIVEKIPELP 520
+RG+ V+ IPE+P
Sbjct: 123 IASSSIVSIIVSRGYRVKTIPEIP 146
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 131 bits (317), Expect = 8e-30
Identities = 67/150 (44%), Positives = 87/150 (58%)
Frame = +2
Query: 74 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 253
+RP V++Y + + LP VF APIR D+V+ V+ + SKN RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 254 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 433
SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 63 SAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRF 122
Query: 434 XXXXXXXXXXXXXXXQARGHIVEKIPELPL 523
ARGH + +P++PL
Sbjct: 123 AVASCIAASAVPALVSARGHHIAGVPQIPL 152
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 129 bits (311), Expect = 4e-29
Identities = 66/141 (46%), Positives = 76/141 (53%)
Frame = +2
Query: 101 EKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGR 280
E V +L LP VF PIR DLV + RQPY VSK AG Q SAESWGTGR
Sbjct: 9 EADGVTVKKTLDLPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGR 68
Query: 281 AVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXX 460
A+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 69 AIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAAS 128
Query: 461 XXXXXXQARGHIVEKIPELPL 523
+ARGH + + LP+
Sbjct: 129 AQASLVEARGHRISDVKMLPI 149
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 129 bits (311), Expect = 4e-29
Identities = 59/107 (55%), Positives = 67/107 (62%)
Frame = +2
Query: 203 KNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 382
++ + V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 383 KPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPL 523
K WR+WH ARGH V +PE+PL
Sbjct: 82 KVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPL 128
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 118 bits (283), Expect = 1e-25
Identities = 57/151 (37%), Positives = 88/151 (58%)
Frame = +2
Query: 71 VARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQ 250
++R V+V +++ + +++ LP VF PIR ++V +V+V+++KNA+QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 251 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 430
SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 59 VSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRK 118
Query: 431 XXXXXXXXXXXXXXXXQARGHIVEKIPELPL 523
QARGH++ ++ E+P+
Sbjct: 119 FAIASAIAATAVVPLVQARGHVLGEVKEVPI 149
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 105 bits (251), Expect = 8e-22
Identities = 59/148 (39%), Positives = 72/148 (48%)
Frame = +2
Query: 80 PLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSA 259
P V V+ VA LP P VF P+RPD++N VH + K R PY VS+ AG Q +A
Sbjct: 3 PTVKVFGPTGTQVA--ELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60
Query: 260 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXX 439
SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 61 HSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAV 114
Query: 440 XXXXXXXXXXXXXQARGHIVEKIPELPL 523
+ARGH + +P +PL
Sbjct: 115 ASALAASANAALVEARGHRIADVPSIPL 142
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 78.6 bits (185), Expect = 8e-14
Identities = 34/95 (35%), Positives = 51/95 (53%)
Frame = +2
Query: 239 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 418
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 419 XXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPL 523
+RGH ++ + P+
Sbjct: 119 KVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPM 153
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 78.6 bits (185), Expect = 8e-14
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Frame = +2
Query: 128 SLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVR 307
++ LP F+ P+R DL+ ++ N RQPY AG +TSAESWG G VA +PRV+
Sbjct: 15 TVELPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWGAGHGVAMVPRVK 74
Query: 308 GGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQA 484
G +G+ A GG + APT P + W +
Sbjct: 75 GRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRAALRSALAATAKPEFVKE 133
Query: 485 RGHIVEKIPELPL 523
RGH+++ +P LP+
Sbjct: 134 RGHVIDDVPHLPV 146
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 76.2 bits (179), Expect = 4e-13
Identities = 50/146 (34%), Positives = 65/146 (44%)
Frame = +2
Query: 86 VSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAES 265
+ VY VA PL F+ PIRPDL+ ++S QP V + AG + S ES
Sbjct: 29 LKVYGIDGAYVADIEAPLHFL--EPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCES 86
Query: 266 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 445
+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 87 FGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRS 143
Query: 446 XXXXXXXXXXXQARGHIVEKIPELPL 523
ARGH+VEK+P LP+
Sbjct: 144 AIAATAYRSWVAARGHVVEKVPSLPV 169
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 73.7 bits (173), Expect = 2e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +2
Query: 170 DLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 316
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 65.7 bits (153), Expect = 6e-10
Identities = 41/145 (28%), Positives = 66/145 (45%)
Frame = +2
Query: 86 VSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAES 265
++VYS K ++ + LP +F+ RPD++ +SM QP+ AG +T+AES
Sbjct: 4 INVYSLKGDITE--EIELPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAES 61
Query: 266 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 445
+G+GR A +PRV+G S + AF GGR P + +H
Sbjct: 62 FGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRS 116
Query: 446 XXXXXXXXXXXQARGHIVEKIPELP 520
+ RGH V ++ ++P
Sbjct: 117 AIAATANKELVEQRGHQVSELEQIP 141
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 60.9 bits (141), Expect = 2e-08
Identities = 39/101 (38%), Positives = 53/101 (52%)
Frame = +2
Query: 83 LVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAE 262
+V VY E+ S+ LP +F+ P+R DL+ +S QP AG +TSA
Sbjct: 15 IVPVYDERGG--EKDSVVLPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAV 72
Query: 263 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 385
S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 73 SLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 59.3 bits (137), Expect = 5e-08
Identities = 42/136 (30%), Positives = 55/136 (40%), Gaps = 2/136 (1%)
Frame = +2
Query: 122 GASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWG--TGRAVARI 295
G + LP VF P R DL+ + + + QP AG SA+S TG ARI
Sbjct: 13 GKEITLPPVFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQARI 72
Query: 296 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 475
R++GGG R G+ RGGR P K + H
Sbjct: 73 ARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKST 132
Query: 476 XQARGHIVEKIPELPL 523
RGHI++ I ELP+
Sbjct: 133 VAGRGHIIDGI-ELPI 147
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 54.8 bits (126), Expect = 1e-06
Identities = 30/81 (37%), Positives = 44/81 (54%)
Frame = +2
Query: 137 LPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 316
LP +F P+R DL+ V ++ ++ QP AG +TSAES+G +AR+PRV+
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVK--- 81
Query: 317 THRSGQGAFGNMCRGGRMFAP 379
SG+ A GGR+ P
Sbjct: 82 --NSGEAALAPNTVGGRLAFP 100
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 54.8 bits (126), Expect = 1e-06
Identities = 34/103 (33%), Positives = 49/103 (47%)
Frame = +2
Query: 92 VYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWG 271
V + K EV + LP VF RPD++ +++ + RQPY + +G S E+WG
Sbjct: 5 VLNLKGEVTE--EIELPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWG 62
Query: 272 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 400
G AR+PR + G + GGR P KP R+W
Sbjct: 63 PGHGYARVPRWKLG-----RRAVVVPQAVGGRRAHPPKPERKW 100
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +2
Query: 137 LPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 310
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ G
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKQDG 75
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 45.6 bits (103), Expect = 7e-04
Identities = 41/145 (28%), Positives = 54/145 (37%), Gaps = 11/145 (7%)
Frame = +2
Query: 122 GASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIP- 298
GAS +P VF +PIR D+VN VH ++KN + E +S G +P
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKND----STTDEIQLCFLLDSQGKRTPCTDVPA 70
Query: 299 -RVRGGGTHRSGQGAFGNMCRGGRMFAPTK---------PWRRWHXXXXXXXXXXXXXXX 448
+ R + +CR AP K WRRWH
Sbjct: 71 TKPRPSPGAPVARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRRWHRRVNIKEKRYAVCSA 130
Query: 449 XXXXXXXXXXQARGHIVEKIPELPL 523
ARGH VE +PE+PL
Sbjct: 131 IAASAVPSLLLARGHRVEGVPEVPL 155
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = +2
Query: 86 VSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAES 265
V +YS E+ + LP VF +R D++ ++S + RQPY S AG + +
Sbjct: 5 VPIYSVSGEMKG--EIDLPEVFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHT 62
Query: 266 WGTGRAVARIPRVRGG 313
G ++R+PR+ GG
Sbjct: 63 TRPGLGISRMPRIAGG 78
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 42.3 bits (95), Expect = 0.007
Identities = 35/104 (33%), Positives = 45/104 (43%), Gaps = 7/104 (6%)
Frame = +2
Query: 110 EVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSK-------EAGHQTSAESW 268
E G ++ LP VF IR DL+ ++ N RQ Y + +AG + S E W
Sbjct: 41 EAKNGKAVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWW 100
Query: 269 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 400
G GR V+RI R G T A RGGR K + W
Sbjct: 101 GKGRGVSRIMRKAGQRT-----AAQNPHTRGGRRAHGPKVDKDW 139
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 38.3 bits (85), Expect = 0.11
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -1
Query: 384 LVGANIRPPRHMLPNAPCP 328
LVGANI PPRHMLP AP P
Sbjct: 106 LVGANILPPRHMLPKAPWP 124
>UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 596
Score = 37.5 bits (83), Expect = 0.19
Identities = 34/103 (33%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Frame = -1
Query: 363 PPRHMLPNAPCPDLWV--PPPRTRGIRATARPVPQDSALV**PASLLTQ*GWRAFFDIDT 190
PP LP P PD +V PPP+ G A PVP L P L + G A F +
Sbjct: 352 PPGEALPPEPVPDSFVAEPPPQAAGFAPQAGPVPTLGELA--PLLPLAEAGAAATFSV-- 407
Query: 189 WTSLTRSGLMGALNTNGRGSEAPATTSLFS-EYTDTKGRATDR 64
W + + G L G A + F E +GRATD+
Sbjct: 408 WPAGCSVRVEGQLLIRLEGLVAFSGNLTFQPEMKRFRGRATDK 450
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 0.75
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 287 ARIPRVRGGGTHRSGQGAFGNMCRGG 364
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q5KIH1 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1015
Score = 35.5 bits (78), Expect = 0.75
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 194 IRGHH*RGQV*WAP*IQTGGGAKPLRRPHSSPNTPTLKVGLL 69
+R H + + WA +Q G+KP RP+S PNTP + G+L
Sbjct: 715 VREHAIKAERKWAV-LQAPAGSKPTSRPNSLPNTPQQRFGVL 755
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 35.1 bits (77), Expect = 1.00
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 197 MSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 367
+++ A ++E G A+SW TGRA A + R R GG R A N G R
Sbjct: 18 LARAAASSVAANREGGG--GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_A2R4J7 Cluster: Similarity to other proteins; n=11;
Eurotiomycetidae|Rep: Similarity to other proteins -
Aspergillus niger
Length = 1372
Score = 34.3 bits (75), Expect = 1.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 375 ANIRPPRHMLPNAPCPDLWVPPPRTRGIRATARPVPQDSA 256
AN P + P + P + VPPP + ATA P P +A
Sbjct: 635 ANQTPNNYPQPTSTTPSVQVPPPAAAAVAATASPAPAPAA 674
>UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1;
Ralstonia pickettii 12J|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 453
Score = 33.9 bits (74), Expect = 2.3
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 203 KNARQPYCVSKEAGH-QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC-RGGRM 370
+NA P V+KEAGH Q +A G V R+ + GTH G+G GN RGG +
Sbjct: 49 ENAHGPQHVAKEAGHLQAAAFGNGLDHQVGRVADI-SVGTHEHGRG--GNRAQRGGAL 103
>UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA
methylase; n=1; Oceanicaulis alexandrii HTCC2633|Rep:
Probable C-5 cytosine-specific DNA methylase -
Oceanicaulis alexandrii HTCC2633
Length = 681
Score = 33.5 bits (73), Expect = 3.0
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +2
Query: 143 FVFKAPIRPDLVNDVHVS----MSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 310
F++K P +PD + HV+ +NA +P+ + E H +A G A + + G
Sbjct: 434 FLYKHPAQPDALQVAHVAPHIMTMRNAGKPFTAANEPTHTVTAGGAGLSLVAAFMAQHNG 493
Query: 311 GGTHRSGQG 337
G S G
Sbjct: 494 GANMESHAG 502
>UniRef50_UPI0000EBD2B3 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 152
Score = 33.1 bits (72), Expect = 4.0
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -1
Query: 366 RPPRHMLPNAPCPDLWVPPPRTRGIRATARPVPQDSAL 253
RPP LP A CP W+PP + G+ +P PQ AL
Sbjct: 90 RPPAQALPGA-CPPTWLPPCLSAGLH---QPRPQPPAL 123
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.1 bits (72), Expect = 4.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 360 PRHMLPNAPCPDLWVPPPR 304
PRH+ P AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_UPI0000DD80EA Cluster: PREDICTED: hypothetical protein; n=3;
Homo/Pan/Gorilla group|Rep: PREDICTED: hypothetical
protein - Homo sapiens
Length = 1559
Score = 32.7 bits (71), Expect = 5.3
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Frame = -3
Query: 517 QLGNLLNNMPSSLNEGRYPGRCHGGGHGSTSLP*VHATVPAPPR---LGRRE---HTSAA 356
Q G L+ P+S + R G G G ++S P A PAP R GRRE T+AA
Sbjct: 1334 QKGCLIKRKPASEGDCRRAGAAQGSGRAASSAP---APAPAPARAELAGRRETPGATAAA 1390
Query: 355 A---HVTECTLP 329
A V +C+ P
Sbjct: 1391 APSPSVAQCSRP 1402
>UniRef50_Q47KQ6 Cluster: Putative uncharacterized protein; n=1;
Thermobifida fusca YX|Rep: Putative uncharacterized
protein - Thermobifida fusca (strain YX)
Length = 168
Score = 32.7 bits (71), Expect = 5.3
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 378 GANI-RPPRHMLPNAPCPDLWVPPPRTRGIRATARPVP 268
GA++ R ML + P P W PPR GI T R +P
Sbjct: 118 GAHLGREASWMLSSGPSPRAWGSPPRFSGIPTTGRSIP 155
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 32.7 bits (71), Expect = 5.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 337 CIR*HVPRRTYVRADQAVEALAPSREPTAE 426
C+R HVP +VRAD+ + LAP +P E
Sbjct: 142 CVRQHVPWWPHVRADEDLPPLAPQDQPAPE 171
>UniRef50_UPI0000F2DA02 Cluster: PREDICTED: similar to ZP1; n=1;
Monodelphis domestica|Rep: PREDICTED: similar to ZP1 -
Monodelphis domestica
Length = 649
Score = 32.3 bits (70), Expect = 7.0
Identities = 20/37 (54%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 363 PPRHMLPNAPCPDLWVPPPR-TRGIRATARPVPQDSA 256
PPR LP P P L PPR TR R+T RP P SA
Sbjct: 148 PPRPSLPARPRPPLSAQPPRSTRPPRST-RPPPPPSA 183
>UniRef50_UPI0000F200AE Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 1756
Score = 32.3 bits (70), Expect = 7.0
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +2
Query: 74 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPD---LVNDVHVSMSKNARQPYCVSKEAG 244
ARP ++ Y + G S PLP AP +P ++D+ + P+ ++ +G
Sbjct: 475 ARPKITSYPQNRRPAGGLSRPLPSPGAAPSKPHHILTISDLEDTRRPRRHSPH--TQNSG 532
Query: 245 HQTSAESWGTGRAVARIPRVRGGGTH 322
++ S G IP R GG+H
Sbjct: 533 TRSHMTSPTLGSPAGPIPS-RAGGSH 557
>UniRef50_Q21YT9 Cluster: Putative uncharacterized protein; n=1;
Rhodoferax ferrireducens T118|Rep: Putative
uncharacterized protein - Rhodoferax ferrireducens
(strain DSM 15236 / ATCC BAA-621 / T118)
Length = 266
Score = 32.3 bits (70), Expect = 7.0
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = -1
Query: 192 TWTSLTRSGLMGALNTNGRG-----SEAPATTSLFSEYTDTKGRATDRLISLYQRS 40
TW ++RSG + AL TN R ++AP+ L S Y T A D L+ L R+
Sbjct: 52 TWLGISRSGRLAAL-TNHRNPAALRADAPSRGELVSAYLQTDASALDYLMELAGRA 106
>UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Rep:
CG17299-PF, isoform F - Drosophila melanogaster (Fruit
fly)
Length = 1400
Score = 32.3 bits (70), Expect = 7.0
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = +2
Query: 140 PFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 319
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 681 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 739
Query: 320 HRSGQGAFGNMCRGGRM 370
+GQGA G GG M
Sbjct: 740 AAAGQGAAGG--AGGLM 754
>UniRef50_Q6SI22 Cluster: NHL repeat domain protein; n=1; uncultured
bacterium 105|Rep: NHL repeat domain protein - uncultured
bacterium 105
Length = 1281
Score = 31.9 bits (69), Expect = 9.3
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -1
Query: 243 PASLLTQ*GWRAFFDIDTWTSLTRSGLMGALNTNGRGSEAPATT--SLFSEYTDTKGRAT 70
PA + TQ W F IDT S+ R G L T + PAT +LF E GR
Sbjct: 1114 PARVSTQNAW---FPIDTLPSILRHGESQMLFTFANATRTPATVRLTLFDELGKEHGRWE 1170
Query: 69 DRLISLYQRSYS 34
L + QR +S
Sbjct: 1171 RILPAFSQRVWS 1182
>UniRef50_Q9XIL4 Cluster: Mutator-like transposase; n=1; Arabidopsis
thaliana|Rep: Mutator-like transposase - Arabidopsis
thaliana (Mouse-ear cress)
Length = 545
Score = 31.9 bits (69), Expect = 9.3
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +2
Query: 188 HVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 337
HV M+ A ++ A T A GTGRA R PRV+ G SG+G
Sbjct: 467 HVLMTAQAAHGQTMT--ARFLTRANQTGTGRARGRPPRVKNGEGKNSGKG 514
>UniRef50_Q6VY42 Cluster: Putative uncharacterized protein; n=1;
Streptomyces phage VWB|Rep: Putative uncharacterized
protein - Streptomyces phage VWB
Length = 1440
Score = 31.9 bits (69), Expect = 9.3
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = -3
Query: 262 LGAGLMTGLLADAVGLARVLRH*YVDIIDEVRSDGRL 152
LGAGL TGL A AV A V +V I++ +S+ RL
Sbjct: 57 LGAGLKTGLAAVAVAGAAVFSAAFVQAIEQDKSNARL 93
>UniRef50_A6R052 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 497
Score = 31.9 bits (69), Expect = 9.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 363 PPRHMLPNAPCPDLWVPPPRT 301
PPRH+ P + P L +PPPRT
Sbjct: 199 PPRHLSPFSNSPPLHLPPPRT 219
>UniRef50_Q96L96 Cluster: Alpha-protein kinase 3; n=4; Eutheria|Rep:
Alpha-protein kinase 3 - Homo sapiens (Human)
Length = 1907
Score = 31.9 bits (69), Expect = 9.3
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 194 SMSKNARQPYCVSKEAGHQTSAESWGTGRAVARI-PRVRGGGTHRSGQGAFGNMCRGGR 367
++++ ARQP + AG A +W TG A A P V GG S + GGR
Sbjct: 160 AINRGARQPRAGAAAAGRGPGAGAWRTGEAAASAGPAVGEGGAMGSRRAPTRGWGAGGR 218
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,074,690
Number of Sequences: 1657284
Number of extensions: 10594107
Number of successful extensions: 38563
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 36255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38502
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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