Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_I01
         (513 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    26   0.65 
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     24   2.6  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   4.6  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   6.1  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   8.0  

>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 26.2 bits (55), Expect = 0.65
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +2

Query: 266 RFQSSQLSTQAIRRPSRPWWEVNVS*R*AILKLGEMMINL-IIFSKF*FSNASI 424
           R  + Q+ T A   P RP+W V +    A  KL    ++L  IF  +  SN  +
Sbjct: 29  RIWNIQMETPADHNPERPFWVVGLQNDEAARKLASRSMSLRCIFELWAHSNEGL 82


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 305 RPSRPWWEV 331
           RP RPWW V
Sbjct: 78  RPGRPWWSV 86


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +3

Query: 183 ANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 293
           A+PD F    S  P    + +S     ++   P +PP
Sbjct: 370 AHPDHFLDHRSPSPQRGNQSLSQMTEILEAIQPEFPP 406


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 507 FYYHNMLQKRKLYLNFVNYYKHKERNI 427
           +YY     +RK+ LN V Y    E N+
Sbjct: 328 YYYEENGDRRKITLNDVYYVPELESNL 354


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 339 ETFTSHHGREGRRIAWVD 286
           E  T+H G  GR+  W++
Sbjct: 674 ELQTAHRGAAGRQATWIE 691


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,927
Number of Sequences: 2352
Number of extensions: 12447
Number of successful extensions: 48
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)